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The map label for this gene is 157961830

Identifier: 157961830

GI number: 157961830

Start: 2435098

End: 2435499

Strand: Direct

Name: 157961830

Synonym: Spea_2009

Alternate gene names: NA

Gene position: 2435098-2435499 (Clockwise)

Preceding gene: 157961829

Following gene: 157961831

Centisome position: 47.06

GC content: 36.82

Gene sequence:

>402_bases
ATGGACAGTTTTTGCCATGATAATACCATGTTAGCCAAGCTTATTAGAAAAGAGAAGAATGCAAGGATGAAGGTTAAGTT
ATTGGCGGTTTTACATTTTCAAGATGGGAAGTCAAGGTATCAAATTGCCGACTTTCTCAAAGTTAGCCGCACCAGTGTCA
ACCGTTGGATTAGCCTCTATTTAGCAAGTGGATTAGAAGGATTAAAAGAGAAACCCCATCGTGGAAGACCCAGCATTCTC
AATCAAGAACAGCTGGTTCAGTTGCAAAATCATATTGAAAATAAGAGTTATCATGGAGAAAAAGTAAAATTAACTGGCGT
AGACATTCAGCTCTACATCGAGAAACAGTTTGGCATTAAATATGAGATATCTAGCGTATATAAATTAATAGAGCGATTTT
AG

Upstream 100 bases:

>100_bases
TTTCAGACTGAGAAGCAGGCTGCCAATTAACATCATTTATCAAAATGTTTGGATTGATAAAGATGGCCGTTTGCAAATAA
GAGAAAGTTAGGAGATCAAA

Downstream 100 bases:

>100_bases
GCCAGTCTTCACTATACGAGCAGCAAAGATGACGAATACAGCATGGTTCGATGTTAGAACTGTCTTTATTCCGTAAATAT
TCTGCACATTCGCTGTTATC

Product: transposase and inactivated derivative

Products: NA

Alternate protein names: ISSod10 Transposase OrfA; Transposase; Transposase ISC

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MDSFCHDNTMLAKLIRKEKNARMKVKLLAVLHFQDGKSRYQIADFLKVSRTSVNRWISLYLASGLEGLKEKPHRGRPSIL
NQEQLVQLQNHIENKSYHGEKVKLTGVDIQLYIEKQFGIKYEISSVYKLIERF

Sequences:

>Translated_133_residues
MDSFCHDNTMLAKLIRKEKNARMKVKLLAVLHFQDGKSRYQIADFLKVSRTSVNRWISLYLASGLEGLKEKPHRGRPSIL
NQEQLVQLQNHIENKSYHGEKVKLTGVDIQLYIEKQFGIKYEISSVYKLIERF
>Mature_133_residues
MDSFCHDNTMLAKLIRKEKNARMKVKLLAVLHFQDGKSRYQIADFLKVSRTSVNRWISLYLASGLEGLKEKPHRGRPSIL
NQEQLVQLQNHIENKSYHGEKVKLTGVDIQLYIEKQFGIKYEISSVYKLIERF

Specific function: Unknown

COG id: COG3415

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15579; Mature: 15579

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSFCHDNTMLAKLIRKEKNARMKVKLLAVLHFQDGKSRYQIADFLKVSRTSVNRWISLY
CCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LASGLEGLKEKPHRGRPSILNQEQLVQLQNHIENKSYHGEKVKLTGVDIQLYIEKQFGIK
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEEECCCCE
YEISSVYKLIERF
EEHHHHHHHHHCC
>Mature Secondary Structure
MDSFCHDNTMLAKLIRKEKNARMKVKLLAVLHFQDGKSRYQIADFLKVSRTSVNRWISLY
CCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LASGLEGLKEKPHRGRPSILNQEQLVQLQNHIENKSYHGEKVKLTGVDIQLYIEKQFGIK
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEEECCCCE
YEISSVYKLIERF
EEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA