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The map label for this gene is yfgC [C]

Identifier: 157961794

GI number: 157961794

Start: 2396527

End: 2397987

Strand: Reverse

Name: yfgC [C]

Synonym: Spea_1971

Alternate gene names: 157961794

Gene position: 2397987-2396527 (Counterclockwise)

Preceding gene: 157961797

Following gene: 157961793

Centisome position: 46.34

GC content: 42.09

Gene sequence:

>1461_bases
TTGAGTAAATTAACTTTTTCAAAATCCGTTATCGCTGGAGCCCTGTCTTTTATTTTATGCACTAGCTCTGCTGTTACTTA
TGCCAATAACGATTTACCTGACTTAGGTACTGCTGCTGTTAATACATTCAGTTTAGAAAAAGAAACTGAAGTAGGTGATG
CCTATATGCGGGTGATCCGTGGCTCAGCCCCTATGCTCAACGACCCAGTTTTAAATCAATACCTTACTGAATTAGGTAAT
AAACTTGTTGCCCATGCTACAGGTGTAAAAACCCCTTTTTACTTTTTCTTATTAAGAAATGATGAAATTAACGCGTTTGC
ATTCTTTGGCGGACATGTTGGCGTGCATACGGGGTTATTTCTAAATGCTGACACAGAGAGTGAGCTTGCCTCGGTTATCG
GTCACGAAATCACCCACGTTACCCAGCGTCACTTAGCGCGCTCTATAGAAGCGCAACAAAAAACCTCTCCAGCAACGATT
GCAGGTATGTTAGGAGCTATTCTGTTAACCATTGCCTCTCCCCAAGCTGGCATGGCAGCATTAGCTACGACTCAGGCATT
AGCGACTCAGTCTAAGATTAACTACACCCGCCTTCATGAAAAAGAAGCTGATCGTATCGGCATGCAAGTCATGGTTGATG
CAGGGTTTGATCCCAATGGTGCTGCAGACTTTTTTGGTAAGCTGGCGACTCGATACCGATTTACGACTAAACCGCCACAA
ATGCTGTTAACGCATCCATTGCCCGAGTCACGTATATCAGAGGCTCGAATTCGCGCCGAACAATATCCACACCGACAAAT
ACCCGATAATCTAAACTTCCAGCTTGCTAAGGCTCGAATTCAAGTAAGATTTTCTGGTTACAGTGAACAGGCAGCACTTT
CTATTTTCGATAAGCAACTCAAACATCACCGCTATGCATTTAAGAGTGCTGCAGAGTATGGCAAGGCTTTAGCGCTATTT
AGATTAAAGAAATACGCCGAATCTGAAAAGATTATCGATGAACTATTAGCCAAGAGCCCTAATAACCTGTTTTTTATCGA
TACTAAAACTGATCTCCTCAGCCAAAGAGGCGCTCAGAAAGAAGCTATTGAGCTGTTATTAACTCAAAAACAATTGAAGC
CCACATCTCAAGTGGTCAATACCAACCTTGCCAATGTCTACATAGAAGATGATCAGATAAGCAAAGCCATTCCTCTGCTT
GAGGACCTTATCTTTCTCGATAAGCAAAACCAATTACCCTATTTCTTATTAAATGAAGCATATAAAAAGAATGGTAATAA
GGCGATGGAGTACTTTGTTAAGGCCGAGTCACTGGCGTTGATTGCTGATTATAAGACGGCTATCGATCAATTAAACTTCG
CTTATCGTGAATCTAAAGATGACCCATTACAGTTAGCAAGAATCGAGGCACGGATCAGGCAGTTTAGACAAGCGGATCGC
GCGCTAGAGCAATTACAATAA

Upstream 100 bases:

>100_bases
TATAACTAATCTAAGGCTATTATCCTAATAAGCAACGCAAACCACAAGTAAGCATTATGGTTTGACAATAACAGAAGCAT
AGCCCAATTTAAGGATCCGC

Downstream 100 bases:

>100_bases
CATCAGTTTCATTGTGACTATGATCACAAAATAAAGTATCATAGTCACAACTTTTAATAACAATAAATTGAATATGACAA
GCGCTACTATTTATCACAAT

Product: peptidase M48 Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MSKLTFSKSVIAGALSFILCTSSAVTYANNDLPDLGTAAVNTFSLEKETEVGDAYMRVIRGSAPMLNDPVLNQYLTELGN
KLVAHATGVKTPFYFFLLRNDEINAFAFFGGHVGVHTGLFLNADTESELASVIGHEITHVTQRHLARSIEAQQKTSPATI
AGMLGAILLTIASPQAGMAALATTQALATQSKINYTRLHEKEADRIGMQVMVDAGFDPNGAADFFGKLATRYRFTTKPPQ
MLLTHPLPESRISEARIRAEQYPHRQIPDNLNFQLAKARIQVRFSGYSEQAALSIFDKQLKHHRYAFKSAAEYGKALALF
RLKKYAESEKIIDELLAKSPNNLFFIDTKTDLLSQRGAQKEAIELLLTQKQLKPTSQVVNTNLANVYIEDDQISKAIPLL
EDLIFLDKQNQLPYFLLNEAYKKNGNKAMEYFVKAESLALIADYKTAIDQLNFAYRESKDDPLQLARIEARIRQFRQADR
ALEQLQ

Sequences:

>Translated_486_residues
MSKLTFSKSVIAGALSFILCTSSAVTYANNDLPDLGTAAVNTFSLEKETEVGDAYMRVIRGSAPMLNDPVLNQYLTELGN
KLVAHATGVKTPFYFFLLRNDEINAFAFFGGHVGVHTGLFLNADTESELASVIGHEITHVTQRHLARSIEAQQKTSPATI
AGMLGAILLTIASPQAGMAALATTQALATQSKINYTRLHEKEADRIGMQVMVDAGFDPNGAADFFGKLATRYRFTTKPPQ
MLLTHPLPESRISEARIRAEQYPHRQIPDNLNFQLAKARIQVRFSGYSEQAALSIFDKQLKHHRYAFKSAAEYGKALALF
RLKKYAESEKIIDELLAKSPNNLFFIDTKTDLLSQRGAQKEAIELLLTQKQLKPTSQVVNTNLANVYIEDDQISKAIPLL
EDLIFLDKQNQLPYFLLNEAYKKNGNKAMEYFVKAESLALIADYKTAIDQLNFAYRESKDDPLQLARIEARIRQFRQADR
ALEQLQ
>Mature_485_residues
SKLTFSKSVIAGALSFILCTSSAVTYANNDLPDLGTAAVNTFSLEKETEVGDAYMRVIRGSAPMLNDPVLNQYLTELGNK
LVAHATGVKTPFYFFLLRNDEINAFAFFGGHVGVHTGLFLNADTESELASVIGHEITHVTQRHLARSIEAQQKTSPATIA
GMLGAILLTIASPQAGMAALATTQALATQSKINYTRLHEKEADRIGMQVMVDAGFDPNGAADFFGKLATRYRFTTKPPQM
LLTHPLPESRISEARIRAEQYPHRQIPDNLNFQLAKARIQVRFSGYSEQAALSIFDKQLKHHRYAFKSAAEYGKALALFR
LKKYAESEKIIDELLAKSPNNLFFIDTKTDLLSQRGAQKEAIELLLTQKQLKPTSQVVNTNLANVYIEDDQISKAIPLLE
DLIFLDKQNQLPYFLLNEAYKKNGNKAMEYFVKAESLALIADYKTAIDQLNFAYRESKDDPLQLARIEARIRQFRQADRA
LEQLQ

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=474, Percent_Identity=43.2489451476793, Blast_Score=368, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 54290; Mature: 54159

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLTFSKSVIAGALSFILCTSSAVTYANNDLPDLGTAAVNTFSLEKETEVGDAYMRVIR
CCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHEEECCCCCHHHHHHHHHHH
GSAPMLNDPVLNQYLTELGNKLVAHATGVKTPFYFFLLRNDEINAFAFFGGHVGVHTGLF
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCHHHEEEE
LNADTESELASVIGHEITHVTQRHLARSIEAQQKTSPATIAGMLGAILLTIASPQAGMAA
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHH
LATTQALATQSKINYTRLHEKEADRIGMQVMVDAGFDPNGAADFFGKLATRYRFTTKPPQ
HHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHEEECCCCCH
MLLTHPLPESRISEARIRAEQYPHRQIPDNLNFQLAKARIQVRFSGYSEQAALSIFDKQL
HEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHH
KHHRYAFKSAAEYGKALALFRLKKYAESEKIIDELLAKSPNNLFFIDTKTDLLSQRGAQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCHH
EAIELLLTQKQLKPTSQVVNTNLANVYIEDDQISKAIPLLEDLIFLDKQNQLPYFLLNEA
HHHHHHHHHHHCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
YKKNGNKAMEYFVKAESLALIADYKTAIDQLNFAYRESKDDPLQLARIEARIRQFRQADR
HHCCCCHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ALEQLQ
HHHHCC
>Mature Secondary Structure 
SKLTFSKSVIAGALSFILCTSSAVTYANNDLPDLGTAAVNTFSLEKETEVGDAYMRVIR
CCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHEEECCCCCHHHHHHHHHHH
GSAPMLNDPVLNQYLTELGNKLVAHATGVKTPFYFFLLRNDEINAFAFFGGHVGVHTGLF
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCHHHEEEE
LNADTESELASVIGHEITHVTQRHLARSIEAQQKTSPATIAGMLGAILLTIASPQAGMAA
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHH
LATTQALATQSKINYTRLHEKEADRIGMQVMVDAGFDPNGAADFFGKLATRYRFTTKPPQ
HHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHEEECCCCCH
MLLTHPLPESRISEARIRAEQYPHRQIPDNLNFQLAKARIQVRFSGYSEQAALSIFDKQL
HEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHH
KHHRYAFKSAAEYGKALALFRLKKYAESEKIIDELLAKSPNNLFFIDTKTDLLSQRGAQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCHH
EAIELLLTQKQLKPTSQVVNTNLANVYIEDDQISKAIPLLEDLIFLDKQNQLPYFLLNEA
HHHHHHHHHHHCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
YKKNGNKAMEYFVKAESLALIADYKTAIDQLNFAYRESKDDPLQLARIEARIRQFRQADR
HHCCCCHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ALEQLQ
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]