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The map label for this gene is ycbK [H]

Identifier: 157961781

GI number: 157961781

Start: 2382849

End: 2383397

Strand: Direct

Name: ycbK [H]

Synonym: Spea_1958

Alternate gene names: 157961781

Gene position: 2382849-2383397 (Clockwise)

Preceding gene: 157961780

Following gene: 157961782

Centisome position: 46.05

GC content: 42.99

Gene sequence:

>549_bases
GTGTCAGTAGTATGTTCCTCGCGTAGACAGTTATTATTAGGATTAGGTGGCGTCGCAATGTTTTCTATGTTGCCATCTAA
AGCTCAAGCAAGTCGTTCAACTAAAGGGGTTAGGAGTCTAGGTTTTTATAACCGCCATACAGGTGAACGCGGGCAAGGAA
GCTACTGGGTTGATGGCGATTATCAAAGTGAAATTTTGACCGACTTTAGTCAGGTACTTCGTGACCATCGACAAAATGAA
GCAGCGCCCATGGATAAGCGTTTATTCGATTTTGCTTATCAATTAAGAGAGTCGTTGAGCTTTAAAGAAGACTTACATGT
GATATCTGGTTATCGTTCGCCTAAAACCAACGCTATGTTAGCTAATCGAAGTAACGGGGTTGCTAAGAAAAGTTATCATA
TGAAAGGTATGGCATTAGATCTAGCCCTCCCTGGAGTCAAGCTTGCTCATATACGAGAAGCGGCATTGGAGTTAAAGCTT
GGTGGCGTTGGTTATTACCCGAAATCAGGCTTTATCCACATTGATACCGGCCCGGTAAGATCTTGGTAA

Upstream 100 bases:

>100_bases
ATAAAGTAGTTATCACTAATTTAGCTAGATTGCTTGCTTTCTGTCATTTGACGGGGTAATTTGCCTGCCAGTTGTTGGAA
AAGTAGTCAGTGGTGTAAGT

Downstream 100 bases:

>100_bases
TGGTTTAAGTAAACAAAGTTATCGTCAGTGCTGTGATAAACTTTGTGCAGCGACAAGTTCCGTGCTAAAATCCAGCCGCT
TTTAGCACGTCATGGTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSVVCSSRRQLLLGLGGVAMFSMLPSKAQASRSTKGVRSLGFYNRHTGERGQGSYWVDGDYQSEILTDFSQVLRDHRQNE
AAPMDKRLFDFAYQLRESLSFKEDLHVISGYRSPKTNAMLANRSNGVAKKSYHMKGMALDLALPGVKLAHIREAALELKL
GGVGYYPKSGFIHIDTGPVRSW

Sequences:

>Translated_182_residues
MSVVCSSRRQLLLGLGGVAMFSMLPSKAQASRSTKGVRSLGFYNRHTGERGQGSYWVDGDYQSEILTDFSQVLRDHRQNE
AAPMDKRLFDFAYQLRESLSFKEDLHVISGYRSPKTNAMLANRSNGVAKKSYHMKGMALDLALPGVKLAHIREAALELKL
GGVGYYPKSGFIHIDTGPVRSW
>Mature_181_residues
SVVCSSRRQLLLGLGGVAMFSMLPSKAQASRSTKGVRSLGFYNRHTGERGQGSYWVDGDYQSEILTDFSQVLRDHRQNEA
APMDKRLFDFAYQLRESLSFKEDLHVISGYRSPKTNAMLANRSNGVAKKSYHMKGMALDLALPGVKLAHIREAALELKLG
GVGYYPKSGFIHIDTGPVRSW

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=177, Percent_Identity=46.3276836158192, Blast_Score=153, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 20258; Mature: 20127

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVVCSSRRQLLLGLGGVAMFSMLPSKAQASRSTKGVRSLGFYNRHTGERGQGSYWVDGD
CCCCCCCHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCC
YQSEILTDFSQVLRDHRQNEAAPMDKRLFDFAYQLRESLSFKEDLHVISGYRSPKTNAML
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEE
ANRSNGVAKKSYHMKGMALDLALPGVKLAHIREAALELKLGGVGYYPKSGFIHIDTGPVR
ECCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCC
SW
CC
>Mature Secondary Structure 
SVVCSSRRQLLLGLGGVAMFSMLPSKAQASRSTKGVRSLGFYNRHTGERGQGSYWVDGD
CCCCCCHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCC
YQSEILTDFSQVLRDHRQNEAAPMDKRLFDFAYQLRESLSFKEDLHVISGYRSPKTNAML
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEE
ANRSNGVAKKSYHMKGMALDLALPGVKLAHIREAALELKLGGVGYYPKSGFIHIDTGPVR
ECCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCC
SW
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]