| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961772
Identifier: 157961772
GI number: 157961772
Start: 2371305
End: 2373161
Strand: Direct
Name: 157961772
Synonym: Spea_1949
Alternate gene names: NA
Gene position: 2371305-2373161 (Clockwise)
Preceding gene: 157961771
Following gene: 157961773
Centisome position: 45.83
GC content: 41.52
Gene sequence:
>1857_bases ATGAAGTTTAAGTTGGATAAAACCCTATCGTTAGTAGCCGTTGGCGTATTGAGTGTACTGCAAGGTGTGCAAGCTGCACC TGTTTATGAAATTATTAACATCGACCTAGATACTTATAATCTAAATGGCACCATTGATAATACCCGTAACGGTTATGGTA TGGCAGTTAATGCTAATAATGAGGCGGTTGGTGCCGCTAAAGGTAAAAAGAAGCTAACTGTGTCAGAAGATGATGATGGT GTCATCGACATTGAAGACGGGGTTGCAGACTCTGAAACGATTAACTACTCGGTTAATCTTCCTATCATAGCTAACAACTT CACTTTTAATTCAGTTGGTAACGAGTGGATGCCAACTTTTGAAAGCGTTAATGGCACTACCGCACCGACGTTCCCCGAAG ATGAATCGACAGTGAATTCGGTCGATACCTTCTTCTACGATATTAATGACACTGGCTTAAAAGTTGGCGCTATGACTGCG CCACAGCAGACAATTGATTATGATGGCAGCAGCGATACTCAAGAGTTTTGGTATTACCGTGAATATGAGCAGCGTGGTTT CGTTAAATCTGGCACTGACAAAGAAATCCCGTTAGTTCCTCCTTTTACAAAGTATATCTATAAGGAAGGAGAGGCTGAGG AGCAAACCATCACTGTCGGTGGTTTCTCTAGTGCTGCGGCGGTTAATGCTGGTGGTTTAGTTGCTGGTTATGCCAGTACT GAACTTAGTGATAATAGCGCCAATATTGTTAAATCCTGTGTCGACGATAATAGTGACACCGCGCCGCAACAGATCTGTAT TCAGGCGGCTCAGTTCCCAAATCAATATGGCTATAGTGATATCCAGTATCAGATCCGTGGTTATGTTTGGCAATATGAAT CGGGAAGTGAAACACTAACTGCGACTATGTTGCCATTAGGCCTAGAAGTCACTAATGATAGTGTATACAGCGCCCAGGGT CTTGGGATCAACGATGACGGTGTCGTAGCGGGCCGCTCTTATGTTTATCGTAAAAATGATAAAGACAGATTGTATTATGA TGCTGCTTACTGGACTAAAGATACTAATGGCGAGTACAAGTATAACTGGGTCGATGTCGATCAAGTAAAAGATGTTTACT CATCAATTGCTTACGATATTAACAACGAAGGAATTTTAGTCGGTAGTTATCACAAGTACATCGATGGCTATCTTCGAGAT AAGTTCTTTTATTATAATACCAATACTGATGAACTTGTTACGCCAAACGACTTTTATAACAATATCTCCGATTTAAGTAG CCGTGGCCGTGATATCAACAACAAAGGCCAGGTTGTGGGTTATATTGAAACGACTCACGATAAAGAGAAACCACGTCCTA AAGCGGCTTTCTTGTACGACCAACCAACTGGTGAGTTTAATAACGTTAATGATTTACTAACTTGTGAGTCTAAAGGTTAT AAGAAAAATGCTGAGGGAAAATGGGAGCGTAACTTAGTCGAGGTCAAAGATGGCTCGGGTAAAACGTTAACCTATAAGAG TGAGATCCTTGTCGTAGAAGGTAATAGTATCAATGAAGATGGTACTATTGTCGGAACTGCGTTTATTCGTAAGCCTTCTT ATAAGTTTGATGATGATGGTAACTTGGTAATTGGTGATAATGGTTTGCCATTCTTTGAGCTTAACGGCTACGGCGATCCG GTTACTTCATTCTTACCACGAATGGTTGTTCTACAACCTAATACCACCTCTGGTGCAGAATCATGTACCGTCATCGATGA TGATGGCAGTAACGACAACTATGAGCGTAAGGGAGCGGCAAGTTTTGCATGGTTATTAGCGTTGCCATTGCTATGGTTTA GACGCCGAGTTAAGTAA
Upstream 100 bases:
>100_bases CATTGTCCGATAAGGAAAGCGAGCTTGAGAGTTGCTTTGAGCGATGGGAAGAGCTCGAATCATTGAAGTAAGCTAAAAAT AAGAAATAGGAAGCGAGTTA
Downstream 100 bases:
>100_bases ATATATAACCAATGTAAAAGAATTGAATCGAGGCTAATGGCCTCGATTTTTTTGAATTAAATTTGTAATATTTCTCAATA GCTTAAATATTAACCTGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MKFKLDKTLSLVAVGVLSVLQGVQAAPVYEIINIDLDTYNLNGTIDNTRNGYGMAVNANNEAVGAAKGKKKLTVSEDDDG VIDIEDGVADSETINYSVNLPIIANNFTFNSVGNEWMPTFESVNGTTAPTFPEDESTVNSVDTFFYDINDTGLKVGAMTA PQQTIDYDGSSDTQEFWYYREYEQRGFVKSGTDKEIPLVPPFTKYIYKEGEAEEQTITVGGFSSAAAVNAGGLVAGYAST ELSDNSANIVKSCVDDNSDTAPQQICIQAAQFPNQYGYSDIQYQIRGYVWQYESGSETLTATMLPLGLEVTNDSVYSAQG LGINDDGVVAGRSYVYRKNDKDRLYYDAAYWTKDTNGEYKYNWVDVDQVKDVYSSIAYDINNEGILVGSYHKYIDGYLRD KFFYYNTNTDELVTPNDFYNNISDLSSRGRDINNKGQVVGYIETTHDKEKPRPKAAFLYDQPTGEFNNVNDLLTCESKGY KKNAEGKWERNLVEVKDGSGKTLTYKSEILVVEGNSINEDGTIVGTAFIRKPSYKFDDDGNLVIGDNGLPFFELNGYGDP VTSFLPRMVVLQPNTTSGAESCTVIDDDGSNDNYERKGAASFAWLLALPLLWFRRRVK
Sequences:
>Translated_618_residues MKFKLDKTLSLVAVGVLSVLQGVQAAPVYEIINIDLDTYNLNGTIDNTRNGYGMAVNANNEAVGAAKGKKKLTVSEDDDG VIDIEDGVADSETINYSVNLPIIANNFTFNSVGNEWMPTFESVNGTTAPTFPEDESTVNSVDTFFYDINDTGLKVGAMTA PQQTIDYDGSSDTQEFWYYREYEQRGFVKSGTDKEIPLVPPFTKYIYKEGEAEEQTITVGGFSSAAAVNAGGLVAGYAST ELSDNSANIVKSCVDDNSDTAPQQICIQAAQFPNQYGYSDIQYQIRGYVWQYESGSETLTATMLPLGLEVTNDSVYSAQG LGINDDGVVAGRSYVYRKNDKDRLYYDAAYWTKDTNGEYKYNWVDVDQVKDVYSSIAYDINNEGILVGSYHKYIDGYLRD KFFYYNTNTDELVTPNDFYNNISDLSSRGRDINNKGQVVGYIETTHDKEKPRPKAAFLYDQPTGEFNNVNDLLTCESKGY KKNAEGKWERNLVEVKDGSGKTLTYKSEILVVEGNSINEDGTIVGTAFIRKPSYKFDDDGNLVIGDNGLPFFELNGYGDP VTSFLPRMVVLQPNTTSGAESCTVIDDDGSNDNYERKGAASFAWLLALPLLWFRRRVK >Mature_618_residues MKFKLDKTLSLVAVGVLSVLQGVQAAPVYEIINIDLDTYNLNGTIDNTRNGYGMAVNANNEAVGAAKGKKKLTVSEDDDG VIDIEDGVADSETINYSVNLPIIANNFTFNSVGNEWMPTFESVNGTTAPTFPEDESTVNSVDTFFYDINDTGLKVGAMTA PQQTIDYDGSSDTQEFWYYREYEQRGFVKSGTDKEIPLVPPFTKYIYKEGEAEEQTITVGGFSSAAAVNAGGLVAGYAST ELSDNSANIVKSCVDDNSDTAPQQICIQAAQFPNQYGYSDIQYQIRGYVWQYESGSETLTATMLPLGLEVTNDSVYSAQG LGINDDGVVAGRSYVYRKNDKDRLYYDAAYWTKDTNGEYKYNWVDVDQVKDVYSSIAYDINNEGILVGSYHKYIDGYLRD KFFYYNTNTDELVTPNDFYNNISDLSSRGRDINNKGQVVGYIETTHDKEKPRPKAAFLYDQPTGEFNNVNDLLTCESKGY KKNAEGKWERNLVEVKDGSGKTLTYKSEILVVEGNSINEDGTIVGTAFIRKPSYKFDDDGNLVIGDNGLPFFELNGYGDP VTSFLPRMVVLQPNTTSGAESCTVIDDDGSNDNYERKGAASFAWLLALPLLWFRRRVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68540; Mature: 68540
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKLDKTLSLVAVGVLSVLQGVQAAPVYEIINIDLDTYNLNGTIDNTRNGYGMAVNANN CCEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCEECCCCCCEEEEEECCC EAVGAAKGKKKLTVSEDDDGVIDIEDGVADSETINYSVNLPIIANNFTFNSVGNEWMPTF CEEECCCCCCEEEEECCCCCEEEECCCCCCCCEEEEEEECCEEECCEEECCCCCCCCCCH ESVNGTTAPTFPEDESTVNSVDTFFYDINDTGLKVGAMTAPQQTIDYDGSSDTQEFWYYR HCCCCCCCCCCCCCCCHHCCEEEEEEEECCCCEEEEEECCCCHHCCCCCCCCCHHHHEEE EYEQRGFVKSGTDKEIPLVPPFTKYIYKEGEAEEQTITVGGFSSAAAVNAGGLVAGYAST EHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCEECCCCEEEEEECC ELSDNSANIVKSCVDDNSDTAPQQICIQAAQFPNQYGYSDIQYQIRGYVWQYESGSETLT CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCEEE ATMLPLGLEVTNDSVYSAQGLGINDDGVVAGRSYVYRKNDKDRLYYDAAYWTKDTNGEYK EEEEEEEEEECCCCEEEECCCCCCCCCEEECCEEEEECCCCCEEEEEEEEEECCCCCCEE YNWVDVDQVKDVYSSIAYDINNEGILVGSYHKYIDGYLRDKFFYYNTNTDELVTPNDFYN EEEEEHHHHHHHHHHHEEEECCCEEEEECHHHHHHHHCCCEEEEEECCCCCEECCHHHHH NISDLSSRGRDINNKGQVVGYIETTHDKEKPRPKAAFLYDQPTGEFNNVNDLLTCESKGY HHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCC KKNAEGKWERNLVEVKDGSGKTLTYKSEILVVEGNSINEDGTIVGTAFIRKPSYKFDDDG CCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCC NLVIGDNGLPFFELNGYGDPVTSFLPRMVVLQPNTTSGAESCTVIDDDGSNDNYERKGAA CEEECCCCCCEEEECCCCCHHHHHCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHH SFAWLLALPLLWFRRRVK HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKFKLDKTLSLVAVGVLSVLQGVQAAPVYEIINIDLDTYNLNGTIDNTRNGYGMAVNANN CCEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCEECCCCCCEEEEEECCC EAVGAAKGKKKLTVSEDDDGVIDIEDGVADSETINYSVNLPIIANNFTFNSVGNEWMPTF CEEECCCCCCEEEEECCCCCEEEECCCCCCCCEEEEEEECCEEECCEEECCCCCCCCCCH ESVNGTTAPTFPEDESTVNSVDTFFYDINDTGLKVGAMTAPQQTIDYDGSSDTQEFWYYR HCCCCCCCCCCCCCCCHHCCEEEEEEEECCCCEEEEEECCCCHHCCCCCCCCCHHHHEEE EYEQRGFVKSGTDKEIPLVPPFTKYIYKEGEAEEQTITVGGFSSAAAVNAGGLVAGYAST EHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCEECCCCEEEEEECC ELSDNSANIVKSCVDDNSDTAPQQICIQAAQFPNQYGYSDIQYQIRGYVWQYESGSETLT CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCCCEEE ATMLPLGLEVTNDSVYSAQGLGINDDGVVAGRSYVYRKNDKDRLYYDAAYWTKDTNGEYK EEEEEEEEEECCCCEEEECCCCCCCCCEEECCEEEEECCCCCEEEEEEEEEECCCCCCEE YNWVDVDQVKDVYSSIAYDINNEGILVGSYHKYIDGYLRDKFFYYNTNTDELVTPNDFYN EEEEEHHHHHHHHHHHEEEECCCEEEEECHHHHHHHHCCCEEEEEECCCCCEECCHHHHH NISDLSSRGRDINNKGQVVGYIETTHDKEKPRPKAAFLYDQPTGEFNNVNDLLTCESKGY HHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCC KKNAEGKWERNLVEVKDGSGKTLTYKSEILVVEGNSINEDGTIVGTAFIRKPSYKFDDDG CCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCC NLVIGDNGLPFFELNGYGDPVTSFLPRMVVLQPNTTSGAESCTVIDDDGSNDNYERKGAA CEEECCCCCCEEEECCCCCHHHHHCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHH SFAWLLALPLLWFRRRVK HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA