| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961708
Identifier: 157961708
GI number: 157961708
Start: 2294204
End: 2294377
Strand: Reverse
Name: 157961708
Synonym: Spea_1884
Alternate gene names: NA
Gene position: 2294377-2294204 (Counterclockwise)
Preceding gene: 157961710
Following gene: 157961705
Centisome position: 44.34
GC content: 35.06
Gene sequence:
>174_bases ATGTCATACCTAGTAAATGGACATGAAATTACCGTAAACTTTCCAGTAGACTCAATTTCAGTCAACAAAACATCAATCGC CTTTACTGACAGTCGAGGCAAAAATAAACAGACATTTTCTAAGCGTACCGAAGCGCTATCATTTATGAAGTGGTTATTGT CTGGTAATAAATAA
Upstream 100 bases:
>100_bases TGGAACTTAAAATTCATCTTTCGCAAAAATGCTAAGGATATCTTATTGTTAAAAAACACTACCTATAATGGGTGGCTAAA AATATAAGGAGTGTGACCAT
Downstream 100 bases:
>100_bases GCTATAAAAGTAAAACTGACTCTTCGATACACCTCCTCTCACTCGTATCGAATGTTTGTCTTCTATAGACAAACGAATAG GACTGAAACATCTACTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 57; Mature: 56
Protein sequence:
>57_residues MSYLVNGHEITVNFPVDSISVNKTSIAFTDSRGKNKQTFSKRTEALSFMKWLLSGNK
Sequences:
>Translated_57_residues MSYLVNGHEITVNFPVDSISVNKTSIAFTDSRGKNKQTFSKRTEALSFMKWLLSGNK >Mature_56_residues SYLVNGHEITVNFPVDSISVNKTSIAFTDSRGKNKQTFSKRTEALSFMKWLLSGNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6425; Mature: 6294
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYLVNGHEITVNFPVDSISVNKTSIAFTDSRGKNKQTFSKRTEALSFMKWLLSGNK CCEECCCEEEEEECCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SYLVNGHEITVNFPVDSISVNKTSIAFTDSRGKNKQTFSKRTEALSFMKWLLSGNK CEECCCEEEEEECCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA