| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961601
Identifier: 157961601
GI number: 157961601
Start: 2164510
End: 2166825
Strand: Reverse
Name: 157961601
Synonym: Spea_1777
Alternate gene names: NA
Gene position: 2166825-2164510 (Counterclockwise)
Preceding gene: 157961602
Following gene: 157961600
Centisome position: 41.87
GC content: 45.81
Gene sequence:
>2316_bases ATGAATATTCGCAGTAAACCTCGATTCTCAGTCTTACCTATGTTCGCAGCGCTTGTCCTTGCAGGGCTGCCGATAGGGGC TAACGCTCTATCGGGTGCAATTTTCACGACCACTGACGACGGTGGCATAGTTAATGAGAATGTGAGATATGGCAGTAAAC TCGAAGTCTATCTTGATGGTGGACCGAGAATGAATGCTCCGGCTTCTGCCGCAGCACTTCCTGATGGCAATTACTACTTC CAAGTTACCGATCCCAGCGGTAAAGATCTACTCTCTAGAGACCATATTAGTTGCCGTGAGATTAAAATCGAAAATGGTGT CATCACCGAGTACCCAGGTGCGGGCGGAACAAACTACGTCAAACAAAAAGGCGTTTGGCAAGCAGTTTCCTGTACTGAAT ACCCGACCAATGGTAACAAAACCATGGCGGTTCACGAATTTAATTCCGATATAGATCACGGCGGCGATCCCCTGCATGCC ATGGTTATTCAACTCTACCCCTATGACGATACACCCAATAATGGTGGCGTTTATAAAGCATGGATAACACCTGTTGGTGA TTATGATCCCATTAATGAGTTTGATGACGGTGGCGGTATGGGAGCTGCGAATCAGCCTAACCAAGAGGGTTATCAAGCAG GAAACTTCCACGGCTTTATTCCTCGTTTCGCCAAGACCGATAATTTTAAGGTAAAAGAGAAAAAACCGCAGTTTGGTATT ATTGCACTACGTAACTATCACGACGCCAACTTAAACTGCCGTTTAGACCTAGGCGAGAAGTTTATCTGGCAATGGCAATA TGGTATCGAAGATGGTTTAAATGTCCGTAATGCCGATAATACCAATGATGAGTCAAGTGGCGATCCAACCACTATTTTGC TCAAAGAAGCTCTAGGCCAGTTAAATGATATCTGGTCTTTAGACCACTTCAGATGGACCGAAGATCAAGACAAAAACCTT AACAGTCAGTATTTCACCACTTCTGGCTATGTTCATGACTACCAGGCTTTCAGTTCACTCAATACCGGCCCCGAGGACCC TAATCTTTGGGATGGCGACGACGCTAATGACTTTATTCAGCGCTTTGTCATGGAAATGCCTTGTCCAGACCTGTTTGATG ATGGTTTAGCGCCTCATACCAGTAATGAGTTCTCTGACTTTATACCTGCAGCCTTAGGTGTTGAGCCTTTGGTCAGTAGT GACCCGCAAATTACTATCACCTTAAGTCAGGTGGGTTTTGCCAATATTAAAGTGAAAAAAATCTTCGATACTAACAATAA CGGTATCCAAGATGGTAACGAAGTTGGGCTAGCCAACTGGCCTGTTAGATTAAAATATGCCCCAAGTTTGTTGGAATCCA ATGGTGGACCAGTCCCCGATACAATTAGTAGCACAGTAAATAGTGATGTGTATGCCGAAGTGGTTGCACGTTTTGGACTC ACTGCAGACCCGATCCTAGAAAACGGTTATGCAAATCGAATGACCGATGCCAACGGTGAGATGACCTTTGGCGTACTATT ACCAAACGGTTATGGTGATGCACCGCTTACTCAGTATCCATCAGACTACTATCAAGTAGAGGAAGCAACAGCGCAAGGCT GGATGGCGACATCAAGTATCACCATTGAGTTTGATGTGCGCTCCGAGGCCAGCGGCCCCGATGGTAGGCAACCACCTATT ATGGGTAATGCCTATCTAGACAATAGCAGCGACCCTCTCGGTGATGTGGTATTCACCAATATCTGCTTCAACGAAGCGAG TTTCGGTACTAAAGGTTATTGGCATAACAAGAATGGCTTAGGCGAAATGGAGACAGCCTTTGTCACAAGTTATATCAATA CATTAGATCCTTATGACAGTGAGACTAGCTATTTCGGTAAAGGTGATGAGCCATTTGATGGCATGTTCACTAATGGTACT TTAGTCGATCCCGCTTACAAGAATGACAAAGTCACTGACGGGATCTCTGCAGGTGCCGGTACGGTCAAGGCCGAGGTGTC TCATTTCTTGATTGATAGCAATGGCGGCGGCGATCCAAGAGAGCAGCTCGCTCAGCAATTACTGGCATTTTTGTTCAATA TTGAGTATCGCCTCGGTGGTGACGCCGTGTTAATGATGCCAGGTGGAGGCACTATGTCTACCGCAGATATCGTTTCTGCT GCAATCGCTGCGTGGCAAGGTACAGATGCCGCAGCGCAAAATCACTACAAAACCTTGTTAGATACCTTTAATAACATGAA AGTTGCCGATGGAAACGGAGTTAAGTACGTACCAAGCAATCCTAGTCAGTGCCCAGCACTGCCCGTCGCATATTAA
Upstream 100 bases:
>100_bases ATCCAAGAAAAACATAACCATTTGAATAATATCAAATAAATTATTGGCACCATATATGTATTAAATCTGTACAAACAATG CGATGAATGAGGTGTCTATT
Downstream 100 bases:
>100_bases TACCAGCAATTGGTAAAATACCTAAACCTAGCTCAGGGATGAGCTTCACTTCTACCTCAGCTTAAATCTGGTGGAACTAA GATAAAATCTGATTCAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 771; Mature: 771
Protein sequence:
>771_residues MNIRSKPRFSVLPMFAALVLAGLPIGANALSGAIFTTTDDGGIVNENVRYGSKLEVYLDGGPRMNAPASAAALPDGNYYF QVTDPSGKDLLSRDHISCREIKIENGVITEYPGAGGTNYVKQKGVWQAVSCTEYPTNGNKTMAVHEFNSDIDHGGDPLHA MVIQLYPYDDTPNNGGVYKAWITPVGDYDPINEFDDGGGMGAANQPNQEGYQAGNFHGFIPRFAKTDNFKVKEKKPQFGI IALRNYHDANLNCRLDLGEKFIWQWQYGIEDGLNVRNADNTNDESSGDPTTILLKEALGQLNDIWSLDHFRWTEDQDKNL NSQYFTTSGYVHDYQAFSSLNTGPEDPNLWDGDDANDFIQRFVMEMPCPDLFDDGLAPHTSNEFSDFIPAALGVEPLVSS DPQITITLSQVGFANIKVKKIFDTNNNGIQDGNEVGLANWPVRLKYAPSLLESNGGPVPDTISSTVNSDVYAEVVARFGL TADPILENGYANRMTDANGEMTFGVLLPNGYGDAPLTQYPSDYYQVEEATAQGWMATSSITIEFDVRSEASGPDGRQPPI MGNAYLDNSSDPLGDVVFTNICFNEASFGTKGYWHNKNGLGEMETAFVTSYINTLDPYDSETSYFGKGDEPFDGMFTNGT LVDPAYKNDKVTDGISAGAGTVKAEVSHFLIDSNGGGDPREQLAQQLLAFLFNIEYRLGGDAVLMMPGGGTMSTADIVSA AIAAWQGTDAAAQNHYKTLLDTFNNMKVADGNGVKYVPSNPSQCPALPVAY
Sequences:
>Translated_771_residues MNIRSKPRFSVLPMFAALVLAGLPIGANALSGAIFTTTDDGGIVNENVRYGSKLEVYLDGGPRMNAPASAAALPDGNYYF QVTDPSGKDLLSRDHISCREIKIENGVITEYPGAGGTNYVKQKGVWQAVSCTEYPTNGNKTMAVHEFNSDIDHGGDPLHA MVIQLYPYDDTPNNGGVYKAWITPVGDYDPINEFDDGGGMGAANQPNQEGYQAGNFHGFIPRFAKTDNFKVKEKKPQFGI IALRNYHDANLNCRLDLGEKFIWQWQYGIEDGLNVRNADNTNDESSGDPTTILLKEALGQLNDIWSLDHFRWTEDQDKNL NSQYFTTSGYVHDYQAFSSLNTGPEDPNLWDGDDANDFIQRFVMEMPCPDLFDDGLAPHTSNEFSDFIPAALGVEPLVSS DPQITITLSQVGFANIKVKKIFDTNNNGIQDGNEVGLANWPVRLKYAPSLLESNGGPVPDTISSTVNSDVYAEVVARFGL TADPILENGYANRMTDANGEMTFGVLLPNGYGDAPLTQYPSDYYQVEEATAQGWMATSSITIEFDVRSEASGPDGRQPPI MGNAYLDNSSDPLGDVVFTNICFNEASFGTKGYWHNKNGLGEMETAFVTSYINTLDPYDSETSYFGKGDEPFDGMFTNGT LVDPAYKNDKVTDGISAGAGTVKAEVSHFLIDSNGGGDPREQLAQQLLAFLFNIEYRLGGDAVLMMPGGGTMSTADIVSA AIAAWQGTDAAAQNHYKTLLDTFNNMKVADGNGVKYVPSNPSQCPALPVAY >Mature_771_residues MNIRSKPRFSVLPMFAALVLAGLPIGANALSGAIFTTTDDGGIVNENVRYGSKLEVYLDGGPRMNAPASAAALPDGNYYF QVTDPSGKDLLSRDHISCREIKIENGVITEYPGAGGTNYVKQKGVWQAVSCTEYPTNGNKTMAVHEFNSDIDHGGDPLHA MVIQLYPYDDTPNNGGVYKAWITPVGDYDPINEFDDGGGMGAANQPNQEGYQAGNFHGFIPRFAKTDNFKVKEKKPQFGI IALRNYHDANLNCRLDLGEKFIWQWQYGIEDGLNVRNADNTNDESSGDPTTILLKEALGQLNDIWSLDHFRWTEDQDKNL NSQYFTTSGYVHDYQAFSSLNTGPEDPNLWDGDDANDFIQRFVMEMPCPDLFDDGLAPHTSNEFSDFIPAALGVEPLVSS DPQITITLSQVGFANIKVKKIFDTNNNGIQDGNEVGLANWPVRLKYAPSLLESNGGPVPDTISSTVNSDVYAEVVARFGL TADPILENGYANRMTDANGEMTFGVLLPNGYGDAPLTQYPSDYYQVEEATAQGWMATSSITIEFDVRSEASGPDGRQPPI MGNAYLDNSSDPLGDVVFTNICFNEASFGTKGYWHNKNGLGEMETAFVTSYINTLDPYDSETSYFGKGDEPFDGMFTNGT LVDPAYKNDKVTDGISAGAGTVKAEVSHFLIDSNGGGDPREQLAQQLLAFLFNIEYRLGGDAVLMMPGGGTMSTADIVSA AIAAWQGTDAAAQNHYKTLLDTFNNMKVADGNGVKYVPSNPSQCPALPVAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83821; Mature: 83821
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRSKPRFSVLPMFAALVLAGLPIGANALSGAIFTTTDDGGIVNENVRYGSKLEVYLDG CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCEEEEECCCCCEEECCCCCCCEEEEEECC GPRMNAPASAAALPDGNYYFQVTDPSGKDLLSRDHISCREIKIENGVITEYPGAGGTNYV CCCCCCCCCCEECCCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCEEEECCCCCCCHHH KQKGVWQAVSCTEYPTNGNKTMAVHEFNSDIDHGGDPLHAMVIQLYPYDDTPNNGGVYKA HHCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEE WITPVGDYDPINEFDDGGGMGAANQPNQEGYQAGNFHGFIPRFAKTDNFKVKEKKPQFGI EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCCCEEE IALRNYHDANLNCRLDLGEKFIWQWQYGIEDGLNVRNADNTNDESSGDPTTILLKEALGQ EEEECCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHH LNDIWSLDHFRWTEDQDKNLNSQYFTTSGYVHDYQAFSSLNTGPEDPNLWDGDDANDFIQ HHHHHCCCCEECCCCCCCCCCCCEEEECCCEEHHHHHHHCCCCCCCCCCCCCCCHHHHHH RFVMEMPCPDLFDDGLAPHTSNEFSDFIPAALGVEPLVSSDPQITITLSQVGFANIKVKK HHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEE IFDTNNNGIQDGNEVGLANWPVRLKYAPSLLESNGGPVPDTISSTVNSDVYAEVVARFGL EEECCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHCC TADPILENGYANRMTDANGEMTFGVLLPNGYGDAPLTQYPSDYYQVEEATAQGWMATSSI CCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEE TIEFDVRSEASGPDGRQPPIMGNAYLDNSSDPLGDVVFTNICFNEASFGTKGYWHNKNGL EEEEEECCCCCCCCCCCCCEECCEEECCCCCCCCHHEEEEEEECCCCCCCCCEEECCCCC GEMETAFVTSYINTLDPYDSETSYFGKGDEPFDGMFTNGTLVDPAYKNDKVTDGISAGAG CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEECCCCCCCCCCCCCCCCCC TVKAEVSHFLIDSNGGGDPREQLAQQLLAFLFNIEYRLGGDAVLMMPGGGTMSTADIVSA EEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCCCHHHHHHHH AIAAWQGTDAAAQNHYKTLLDTFNNMKVADGNGVKYVPSNPSQCPALPVAY HHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure MNIRSKPRFSVLPMFAALVLAGLPIGANALSGAIFTTTDDGGIVNENVRYGSKLEVYLDG CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCEEEEECCCCCEEECCCCCCCEEEEEECC GPRMNAPASAAALPDGNYYFQVTDPSGKDLLSRDHISCREIKIENGVITEYPGAGGTNYV CCCCCCCCCCEECCCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCEEEECCCCCCCHHH KQKGVWQAVSCTEYPTNGNKTMAVHEFNSDIDHGGDPLHAMVIQLYPYDDTPNNGGVYKA HHCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEE WITPVGDYDPINEFDDGGGMGAANQPNQEGYQAGNFHGFIPRFAKTDNFKVKEKKPQFGI EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCEEEECCCCCEEE IALRNYHDANLNCRLDLGEKFIWQWQYGIEDGLNVRNADNTNDESSGDPTTILLKEALGQ EEEECCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHH LNDIWSLDHFRWTEDQDKNLNSQYFTTSGYVHDYQAFSSLNTGPEDPNLWDGDDANDFIQ HHHHHCCCCEECCCCCCCCCCCCEEEECCCEEHHHHHHHCCCCCCCCCCCCCCCHHHHHH RFVMEMPCPDLFDDGLAPHTSNEFSDFIPAALGVEPLVSSDPQITITLSQVGFANIKVKK HHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEE IFDTNNNGIQDGNEVGLANWPVRLKYAPSLLESNGGPVPDTISSTVNSDVYAEVVARFGL EEECCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHCC TADPILENGYANRMTDANGEMTFGVLLPNGYGDAPLTQYPSDYYQVEEATAQGWMATSSI CCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEE TIEFDVRSEASGPDGRQPPIMGNAYLDNSSDPLGDVVFTNICFNEASFGTKGYWHNKNGL EEEEEECCCCCCCCCCCCCEECCEEECCCCCCCCHHEEEEEEECCCCCCCCCEEECCCCC GEMETAFVTSYINTLDPYDSETSYFGKGDEPFDGMFTNGTLVDPAYKNDKVTDGISAGAG CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEECCCCCCCCCCCCCCCCCC TVKAEVSHFLIDSNGGGDPREQLAQQLLAFLFNIEYRLGGDAVLMMPGGGTMSTADIVSA EEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCEEEEECCCCCCHHHHHHHH AIAAWQGTDAAAQNHYKTLLDTFNNMKVADGNGVKYVPSNPSQCPALPVAY HHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA