Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157961565

Identifier: 157961565

GI number: 157961565

Start: 2117271

End: 2118509

Strand: Direct

Name: 157961565

Synonym: Spea_1741

Alternate gene names: NA

Gene position: 2117271-2118509 (Clockwise)

Preceding gene: 157961564

Following gene: 157961566

Centisome position: 40.92

GC content: 46.97

Gene sequence:

>1239_bases
ATGGCGAGTTTTTCCCGCTTGTTATATGCGAGTTTTGTAACGGTTTTGAGCTTGCTGCCATTATCTTCCCAAGCAGAAAC
AGCGCATTTCTCGGCGCAATGGTTAGTGGATGATGTCGTGCTTGCAGAGCGTGTACAAAACACCGTTTGGCTGGCCATCA
TCAGTGACGAGGCCATCGCCGCGAATGTATCTATACAGGAGGTCAAAGTTAAGCAGCTATTTATCGAATCTGCCGATGCA
CCTATCTATACCACTCGGATGATAGAGGGGAAGCGAAAGCACGTCGCCCAATTTAAATATGATATCTACCCAGCTCAGTT
TGGTGAGTTTGTCTTGCCTAAAACTGAGATAACGCTCGGTCGAGGTGACAAAGCTCAAGTGGTAACCTCTTCAAGTAAGC
GTGTTGACATTGCGCAGCAAGTCGATGCTTCAAGGGGGATGCTCATAACACCCAAGCTAACCCTTGAGCAGAAGCTATCA
GCCAGTGAGTTTGTTGCAGGTGGAGCCGTGAGCCGAGAGATCACCATGGCGGTGGATAACCTGCCTGGCTATTTAATTGC
GGAGCTCTCTCTATCACTCGATAGTCGGGATGCTGATCTGCGAGTCACGGCAAATGCGACCCAATCCCGTGCCTATCGCG
GTACGCTTACAGGTAAGAGAGTAACAGAGCTACAATATCGCTTTTCACGTGTCGGTGAGTATCGATTACCTGAGATTAAG
GTTAGCTGGTGGCATCCAGCGCAAGCAGTGGTGAAGCATAGCATTATTCCTGCAATCGATATCGTCGTCACTCCTCCACC
TCCTTTACCCTTAAAGCAGCGAGTCGCTATATGGCAGGCGCAGCTCAGTGATTTTCTCGTGCAGTACCAGTTAGCACTAA
TGTTAGTTTTTATCTGTCTGCTTATTGTTTGGTGGCAGCGTCAGCTTATTTTCCAAAAGCTAGGCTACTGTTATGTAGCT
GCATTAACAAAGTTAAGCACTCCTTTGCTTATGGCATGTCTTATTACATTAAGGGCAGTATTTACCCCTAAAAAACTGAT
GCCTAGCCTGCTCAGTCGCTGGCTACAATGTATTGAGCAACCTTTTCAGAGCGCGGCAAAATCTATATTCCTTAGCCTCG
AGTACCAAGCCGACGGTAGGGTTAAGCTTGATAGAGTGGCACTAATAAAAACCATGTGCAGCATTGTTTGGCGTCAATAT
TGTCAGCCATTTTCCTTACAGCCGTTAAATCCAAACTAA

Upstream 100 bases:

>100_bases
CAAATCTTGATCCAAAACTGAGTATTGATTTAAAACAGAGTCTTGGAGCAAAACAGAGTCAGACGGATGCTGTTAGGGCG
ACAGAGCAAGGAGATCACTA

Downstream 100 bases:

>100_bases
CTAAGCTGCCTAATAAGCTGATTTAAGTTGCTGGGTTAGGCTTGAGATTAGTAAATCTCCCAGTTCTCACAGCAAGCTTC
ATTGAGGTAAAGTTTTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MASFSRLLYASFVTVLSLLPLSSQAETAHFSAQWLVDDVVLAERVQNTVWLAIISDEAIAANVSIQEVKVKQLFIESADA
PIYTTRMIEGKRKHVAQFKYDIYPAQFGEFVLPKTEITLGRGDKAQVVTSSSKRVDIAQQVDASRGMLITPKLTLEQKLS
ASEFVAGGAVSREITMAVDNLPGYLIAELSLSLDSRDADLRVTANATQSRAYRGTLTGKRVTELQYRFSRVGEYRLPEIK
VSWWHPAQAVVKHSIIPAIDIVVTPPPPLPLKQRVAIWQAQLSDFLVQYQLALMLVFICLLIVWWQRQLIFQKLGYCYVA
ALTKLSTPLLMACLITLRAVFTPKKLMPSLLSRWLQCIEQPFQSAAKSIFLSLEYQADGRVKLDRVALIKTMCSIVWRQY
CQPFSLQPLNPN

Sequences:

>Translated_412_residues
MASFSRLLYASFVTVLSLLPLSSQAETAHFSAQWLVDDVVLAERVQNTVWLAIISDEAIAANVSIQEVKVKQLFIESADA
PIYTTRMIEGKRKHVAQFKYDIYPAQFGEFVLPKTEITLGRGDKAQVVTSSSKRVDIAQQVDASRGMLITPKLTLEQKLS
ASEFVAGGAVSREITMAVDNLPGYLIAELSLSLDSRDADLRVTANATQSRAYRGTLTGKRVTELQYRFSRVGEYRLPEIK
VSWWHPAQAVVKHSIIPAIDIVVTPPPPLPLKQRVAIWQAQLSDFLVQYQLALMLVFICLLIVWWQRQLIFQKLGYCYVA
ALTKLSTPLLMACLITLRAVFTPKKLMPSLLSRWLQCIEQPFQSAAKSIFLSLEYQADGRVKLDRVALIKTMCSIVWRQY
CQPFSLQPLNPN
>Mature_411_residues
ASFSRLLYASFVTVLSLLPLSSQAETAHFSAQWLVDDVVLAERVQNTVWLAIISDEAIAANVSIQEVKVKQLFIESADAP
IYTTRMIEGKRKHVAQFKYDIYPAQFGEFVLPKTEITLGRGDKAQVVTSSSKRVDIAQQVDASRGMLITPKLTLEQKLSA
SEFVAGGAVSREITMAVDNLPGYLIAELSLSLDSRDADLRVTANATQSRAYRGTLTGKRVTELQYRFSRVGEYRLPEIKV
SWWHPAQAVVKHSIIPAIDIVVTPPPPLPLKQRVAIWQAQLSDFLVQYQLALMLVFICLLIVWWQRQLIFQKLGYCYVAA
LTKLSTPLLMACLITLRAVFTPKKLMPSLLSRWLQCIEQPFQSAAKSIFLSLEYQADGRVKLDRVALIKTMCSIVWRQYC
QPFSLQPLNPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46339; Mature: 46208

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFSRLLYASFVTVLSLLPLSSQAETAHFSAQWLVDDVVLAERVQNTVWLAIISDEAIA
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEE
ANVSIQEVKVKQLFIESADAPIYTTRMIEGKRKHVAQFKYDIYPAQFGEFVLPKTEITLG
ECCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHEECCHHHCCCEECCCCEEEEC
RGDKAQVVTSSSKRVDIAQQVDASRGMLITPKLTLEQKLSASEFVAGGAVSREITMAVDN
CCCCCEEEECCCCCEEHHHHHCCCCCEEECCCCCHHHHCCHHHHHCCCCCCCEEEEEECC
LPGYLIAELSLSLDSRDADLRVTANATQSRAYRGTLTGKRVTELQYRFSRVGEYRLPEIK
CCCEEEEEEEECCCCCCCCEEEEECCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCEEE
VSWWHPAQAVVKHSIIPAIDIVVTPPPPLPLKQRVAIWQAQLSDFLVQYQLALMLVFICL
EEEECCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVWWQRQLIFQKLGYCYVAALTKLSTPLLMACLITLRAVFTPKKLMPSLLSRWLQCIEQ
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
PFQSAAKSIFLSLEYQADGRVKLDRVALIKTMCSIVWRQYCQPFSLQPLNPN
HHHHHHHHEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ASFSRLLYASFVTVLSLLPLSSQAETAHFSAQWLVDDVVLAERVQNTVWLAIISDEAIA
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEE
ANVSIQEVKVKQLFIESADAPIYTTRMIEGKRKHVAQFKYDIYPAQFGEFVLPKTEITLG
ECCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHEECCHHHCCCEECCCCEEEEC
RGDKAQVVTSSSKRVDIAQQVDASRGMLITPKLTLEQKLSASEFVAGGAVSREITMAVDN
CCCCCEEEECCCCCEEHHHHHCCCCCEEECCCCCHHHHCCHHHHHCCCCCCCEEEEEECC
LPGYLIAELSLSLDSRDADLRVTANATQSRAYRGTLTGKRVTELQYRFSRVGEYRLPEIK
CCCEEEEEEEECCCCCCCCEEEEECCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCEEE
VSWWHPAQAVVKHSIIPAIDIVVTPPPPLPLKQRVAIWQAQLSDFLVQYQLALMLVFICL
EEEECCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVWWQRQLIFQKLGYCYVAALTKLSTPLLMACLITLRAVFTPKKLMPSLLSRWLQCIEQ
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
PFQSAAKSIFLSLEYQADGRVKLDRVALIKTMCSIVWRQYCQPFSLQPLNPN
HHHHHHHHEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA