| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961561
Identifier: 157961561
GI number: 157961561
Start: 2113197
End: 2114117
Strand: Direct
Name: 157961561
Synonym: Spea_1737
Alternate gene names: NA
Gene position: 2113197-2114117 (Clockwise)
Preceding gene: 157961560
Following gene: 157961562
Centisome position: 40.84
GC content: 47.67
Gene sequence:
>921_bases ATGAGCAGTGATGAGCGTATATATACCAATTTCTCTCGATTAAGCTTACTGGCTAAAAAGGGTAGAGGCCTCAGTTGGCG CCCCCCCTATAGCAAAATCTCGCCACTTAGCGGTCTGCAGAAGAGTAGTCAGCGTGGTCGTGGCCTAGATTTCGTTGAGC TGCGTCACTACTTTGATGGCGATGATGTTCGCTGTATCGACTGGCGCGTGACTCAGCGTACTGGACAGGCCTTTATCCGT CTCTATAGCGAGGAGAAAGACAAGAGTGCCGTGCTGTTGATTGACCTTCGTAGCAGTATGTTTTTTGCAAGTGACGGAGT GATGAAGTCAGTTTTAGCCTCTGAACTCGCGGCGATTATTGCGGGTCGTATTCAGGTCGAGGGTGACAGGATCGGTGCGC TTATGCTCACAGATACCCATATCGAATCCCATAGCGCCATGCGCGGCGAAAAATCTCTTTTGAGCTTATTGGAAAAAGTG ACCCAGTTAGGTGGCCGTTTACCCGCTCAAGGGCAAATAGAACCCCCGAGCTTAGATGATGCACTCCACCTGCTTTGTCA GCAAAAAATTAAAGAGAGCCAAATCTTTATTATCAGTGATTTCGTTGATTTCATTGATAAAACCAGTCGCGCACTACTAT CTCAACTCGCGAGACACAATAATATTATCGGCTTGAGAGTGAGTGACCCTCTGGAGGATGAGCTACCCAATAGTAACGTT TTGATGGGCGATGGTCTGCTACAGCTGGAGATCAATGGTGATAACGGTCAGCTTCGTCAGCGATATAATCGATTTACCAT CGAGCATAATCAAGGGGTAGAGAACGGCTTCTTATCAATCGGCCAGCCTTACTTAGCATTAACGACTCACAAAGAGAGTT GGCAGCAGCTGTTTTCTATGTCGTCTGCTAGGAGGCGCTAA
Upstream 100 bases:
>100_bases TGCTCTCTTTTAGCTGTATCAACCAAAATATCAGCACAGATGCGGTGATCGATAAGTTACTCGATTGCGTAGCACACGTA TAGATAATATAGGGGGGGCT
Downstream 100 bases:
>100_bases TATGAGTGAACGGATGCAATCAAGTGGGCAGTTGGCAGAATTTGGCTCGCACCTAATTAAAAAGGCGCAGTGGCAAACGC CTCCCGAAGCGATATCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSSDERIYTNFSRLSLLAKKGRGLSWRPPYSKISPLSGLQKSSQRGRGLDFVELRHYFDGDDVRCIDWRVTQRTGQAFIR LYSEEKDKSAVLLIDLRSSMFFASDGVMKSVLASELAAIIAGRIQVEGDRIGALMLTDTHIESHSAMRGEKSLLSLLEKV TQLGGRLPAQGQIEPPSLDDALHLLCQQKIKESQIFIISDFVDFIDKTSRALLSQLARHNNIIGLRVSDPLEDELPNSNV LMGDGLLQLEINGDNGQLRQRYNRFTIEHNQGVENGFLSIGQPYLALTTHKESWQQLFSMSSARRR
Sequences:
>Translated_306_residues MSSDERIYTNFSRLSLLAKKGRGLSWRPPYSKISPLSGLQKSSQRGRGLDFVELRHYFDGDDVRCIDWRVTQRTGQAFIR LYSEEKDKSAVLLIDLRSSMFFASDGVMKSVLASELAAIIAGRIQVEGDRIGALMLTDTHIESHSAMRGEKSLLSLLEKV TQLGGRLPAQGQIEPPSLDDALHLLCQQKIKESQIFIISDFVDFIDKTSRALLSQLARHNNIIGLRVSDPLEDELPNSNV LMGDGLLQLEINGDNGQLRQRYNRFTIEHNQGVENGFLSIGQPYLALTTHKESWQQLFSMSSARRR >Mature_305_residues SSDERIYTNFSRLSLLAKKGRGLSWRPPYSKISPLSGLQKSSQRGRGLDFVELRHYFDGDDVRCIDWRVTQRTGQAFIRL YSEEKDKSAVLLIDLRSSMFFASDGVMKSVLASELAAIIAGRIQVEGDRIGALMLTDTHIESHSAMRGEKSLLSLLEKVT QLGGRLPAQGQIEPPSLDDALHLLCQQKIKESQIFIISDFVDFIDKTSRALLSQLARHNNIIGLRVSDPLEDELPNSNVL MGDGLLQLEINGDNGQLRQRYNRFTIEHNQGVENGFLSIGQPYLALTTHKESWQQLFSMSSARRR
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34464; Mature: 34333
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDERIYTNFSRLSLLAKKGRGLSWRPPYSKISPLSGLQKSSQRGRGLDFVELRHYFDG CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCHHHHHHHCCC DDVRCIDWRVTQRTGQAFIRLYSEEKDKSAVLLIDLRSSMFFASDGVMKSVLASELAAII CCEEEEEEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCEECCCHHHHHHHHHHHHHHH AGRIQVEGDRIGALMLTDTHIESHSAMRGEKSLLSLLEKVTQLGGRLPAQGQIEPPSLDD HHHEEECCCCEEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH ALHLLCQQKIKESQIFIISDFVDFIDKTSRALLSQLARHNNIIGLRVSDPLEDELPNSNV HHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCE LMGDGLLQLEINGDNGQLRQRYNRFTIEHNQGVENGFLSIGQPYLALTTHKESWQQLFSM EEECCEEEEEEECCCHHHHHHHHHEEEECCCCCCCCCHHCCCCEEEEEECHHHHHHHHHH SSARRR HHHCCC >Mature Secondary Structure SSDERIYTNFSRLSLLAKKGRGLSWRPPYSKISPLSGLQKSSQRGRGLDFVELRHYFDG CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCHHHHHHHCCC DDVRCIDWRVTQRTGQAFIRLYSEEKDKSAVLLIDLRSSMFFASDGVMKSVLASELAAII CCEEEEEEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCEECCCHHHHHHHHHHHHHHH AGRIQVEGDRIGALMLTDTHIESHSAMRGEKSLLSLLEKVTQLGGRLPAQGQIEPPSLDD HHHEEECCCCEEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH ALHLLCQQKIKESQIFIISDFVDFIDKTSRALLSQLARHNNIIGLRVSDPLEDELPNSNV HHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCE LMGDGLLQLEINGDNGQLRQRYNRFTIEHNQGVENGFLSIGQPYLALTTHKESWQQLFSM EEECCEEEEEEECCCHHHHHHHHHEEEECCCCCCCCCHHCCCCEEEEEECHHHHHHHHHH SSARRR HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA