| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157961492
Identifier: 157961492
GI number: 157961492
Start: 2019657
End: 2020121
Strand: Reverse
Name: 157961492
Synonym: Spea_1667
Alternate gene names: NA
Gene position: 2020121-2019657 (Counterclockwise)
Preceding gene: 157961493
Following gene: 157961489
Centisome position: 39.04
GC content: 41.29
Gene sequence:
>465_bases ATGATTAAATCTGTACTTTTTGCAGCAGTGCTTTTAACGCTAGCCGCTTGTAGCCCCTCAGAACAGCATAGCGATGATAC ACACAGTTCAGATAAGGTATCACTTCGTTCACCCGAGTTAAGCTCTCTGGGCTTTTTAAACGCCATTTACGTTGATAGGG ATGTAGAAAAAGCCAAACTCTATGTCAATGACTCGCTCAAAGAGATCTTAGGCCACTATTATATTGCCTCATCGGTACAG CGCTATGTATTAAACCTATCGATGACAGATGTACAGCTTGAAGTTGATGAAGTTGATATCGATTTCTTTCGTAAGTTTAC CGACGATGTGACTGTCATAGTAAAAATTAAAGGACTACGCGGTGGCCAGGATTGGATTGATGATCGGACTATACGCCTAC ATAAACGCAATGATAAATGGATAATAGTCGAGATCATGCCTGAGAAACGTCAGGTGAACGGTTAA
Upstream 100 bases:
>100_bases GATCTTTCTCGAGGTCAAGCTTTTCACTCGATCAAAATGAAAATCTTGCGTTAATCTACAATAATCGTGATACTGCATAA AATTCATTATCTTCGATATT
Downstream 100 bases:
>100_bases TACCAACAGGTATACTCTGCAGTGACGCTTTCAAGCCCCTAACAAAAAATAGCAACCCAAGTGGTTGCTATTTTAGTATT AAAACCAGTATCTACTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MIKSVLFAAVLLTLAACSPSEQHSDDTHSSDKVSLRSPELSSLGFLNAIYVDRDVEKAKLYVNDSLKEILGHYYIASSVQ RYVLNLSMTDVQLEVDEVDIDFFRKFTDDVTVIVKIKGLRGGQDWIDDRTIRLHKRNDKWIIVEIMPEKRQVNG
Sequences:
>Translated_154_residues MIKSVLFAAVLLTLAACSPSEQHSDDTHSSDKVSLRSPELSSLGFLNAIYVDRDVEKAKLYVNDSLKEILGHYYIASSVQ RYVLNLSMTDVQLEVDEVDIDFFRKFTDDVTVIVKIKGLRGGQDWIDDRTIRLHKRNDKWIIVEIMPEKRQVNG >Mature_154_residues MIKSVLFAAVLLTLAACSPSEQHSDDTHSSDKVSLRSPELSSLGFLNAIYVDRDVEKAKLYVNDSLKEILGHYYIASSVQ RYVLNLSMTDVQLEVDEVDIDFFRKFTDDVTVIVKIKGLRGGQDWIDDRTIRLHKRNDKWIIVEIMPEKRQVNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17600; Mature: 17600
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSVLFAAVLLTLAACSPSEQHSDDTHSSDKVSLRSPELSSLGFLNAIYVDRDVEKAKL CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCEEE YVNDSLKEILGHYYIASSVQRYVLNLSMTDVQLEVDEVDIDFFRKFTDDVTVIVKIKGLR EECHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHCCCEEEEEEEECCC GGQDWIDDRTIRLHKRNDKWIIVEIMPEKRQVNG CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCC >Mature Secondary Structure MIKSVLFAAVLLTLAACSPSEQHSDDTHSSDKVSLRSPELSSLGFLNAIYVDRDVEKAKL CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCEEE YVNDSLKEILGHYYIASSVQRYVLNLSMTDVQLEVDEVDIDFFRKFTDDVTVIVKIKGLR EECHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHCCCEEEEEEEECCC GGQDWIDDRTIRLHKRNDKWIIVEIMPEKRQVNG CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA