Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157961492

Identifier: 157961492

GI number: 157961492

Start: 2019657

End: 2020121

Strand: Reverse

Name: 157961492

Synonym: Spea_1667

Alternate gene names: NA

Gene position: 2020121-2019657 (Counterclockwise)

Preceding gene: 157961493

Following gene: 157961489

Centisome position: 39.04

GC content: 41.29

Gene sequence:

>465_bases
ATGATTAAATCTGTACTTTTTGCAGCAGTGCTTTTAACGCTAGCCGCTTGTAGCCCCTCAGAACAGCATAGCGATGATAC
ACACAGTTCAGATAAGGTATCACTTCGTTCACCCGAGTTAAGCTCTCTGGGCTTTTTAAACGCCATTTACGTTGATAGGG
ATGTAGAAAAAGCCAAACTCTATGTCAATGACTCGCTCAAAGAGATCTTAGGCCACTATTATATTGCCTCATCGGTACAG
CGCTATGTATTAAACCTATCGATGACAGATGTACAGCTTGAAGTTGATGAAGTTGATATCGATTTCTTTCGTAAGTTTAC
CGACGATGTGACTGTCATAGTAAAAATTAAAGGACTACGCGGTGGCCAGGATTGGATTGATGATCGGACTATACGCCTAC
ATAAACGCAATGATAAATGGATAATAGTCGAGATCATGCCTGAGAAACGTCAGGTGAACGGTTAA

Upstream 100 bases:

>100_bases
GATCTTTCTCGAGGTCAAGCTTTTCACTCGATCAAAATGAAAATCTTGCGTTAATCTACAATAATCGTGATACTGCATAA
AATTCATTATCTTCGATATT

Downstream 100 bases:

>100_bases
TACCAACAGGTATACTCTGCAGTGACGCTTTCAAGCCCCTAACAAAAAATAGCAACCCAAGTGGTTGCTATTTTAGTATT
AAAACCAGTATCTACTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MIKSVLFAAVLLTLAACSPSEQHSDDTHSSDKVSLRSPELSSLGFLNAIYVDRDVEKAKLYVNDSLKEILGHYYIASSVQ
RYVLNLSMTDVQLEVDEVDIDFFRKFTDDVTVIVKIKGLRGGQDWIDDRTIRLHKRNDKWIIVEIMPEKRQVNG

Sequences:

>Translated_154_residues
MIKSVLFAAVLLTLAACSPSEQHSDDTHSSDKVSLRSPELSSLGFLNAIYVDRDVEKAKLYVNDSLKEILGHYYIASSVQ
RYVLNLSMTDVQLEVDEVDIDFFRKFTDDVTVIVKIKGLRGGQDWIDDRTIRLHKRNDKWIIVEIMPEKRQVNG
>Mature_154_residues
MIKSVLFAAVLLTLAACSPSEQHSDDTHSSDKVSLRSPELSSLGFLNAIYVDRDVEKAKLYVNDSLKEILGHYYIASSVQ
RYVLNLSMTDVQLEVDEVDIDFFRKFTDDVTVIVKIKGLRGGQDWIDDRTIRLHKRNDKWIIVEIMPEKRQVNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17600; Mature: 17600

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSVLFAAVLLTLAACSPSEQHSDDTHSSDKVSLRSPELSSLGFLNAIYVDRDVEKAKL
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCEEE
YVNDSLKEILGHYYIASSVQRYVLNLSMTDVQLEVDEVDIDFFRKFTDDVTVIVKIKGLR
EECHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHCCCEEEEEEEECCC
GGQDWIDDRTIRLHKRNDKWIIVEIMPEKRQVNG
CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MIKSVLFAAVLLTLAACSPSEQHSDDTHSSDKVSLRSPELSSLGFLNAIYVDRDVEKAKL
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCEEE
YVNDSLKEILGHYYIASSVQRYVLNLSMTDVQLEVDEVDIDFFRKFTDDVTVIVKIKGLR
EECHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHCCCEEEEEEEECCC
GGQDWIDDRTIRLHKRNDKWIIVEIMPEKRQVNG
CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA