| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961484
Identifier: 157961484
GI number: 157961484
Start: 2007456
End: 2010110
Strand: Reverse
Name: 157961484
Synonym: Spea_1658
Alternate gene names: NA
Gene position: 2010110-2007456 (Counterclockwise)
Preceding gene: 157961485
Following gene: 157961483
Centisome position: 38.85
GC content: 47.65
Gene sequence:
>2655_bases ATGCTCAACAAGAAACCTTCATGGCTTATGCCTACCTTGATAGCCAGTGCTGTAGCAATAAGCCTAGGAGCTTGTTCATC AGACGATGACGAACCCAACGTAGTCGAAGATGACACTGCTGTTGTCGCACCGACGCCAGAACCCGGCCCTACCTTCCCTG ATGGTGCCATCATGATTGAAGCGGGTGAAAACTTAACCATACGTATTCAAGAAGCCTTGATCAACGCACAGAGTGACGAT GTCATTGTGCTGCCAAAAGGTAACTTTGAAATTGCATCGACACTCCTATTTGATGGCGATGTAGACGGCGACGGCAGTTA CGCAAAAAACGTGACTATCATGGGCTACGGCATGGAAGAGACGGTTCTAGACTTCTCTAAAGCTAACTCGGGCGACGGTA TTTTTGTTCAGAACGCGCTCAACATTATCATTCAAGACCTGTCGGTAAATGAAGCCAAGAACAACGGCATTAAGCTTAAA AACACCAACGGCATCATCCTTCGCCGCCTAGCGACTGTTTGGGAAGGTGAGCTGGATGAAGGCAACGGTGCATACGGCCT CTACCCGGTAGAATGTGAAAACATTCTTATCGAAGACACCTATGTTCGTGGTAGTGCCGATGCAGGTATTTACGTGGGTC AATCCGAATATATTGTGGTGCGTCGCAATATCGCTAAAGAAAACGTTGCTGGTATTGAGATTGAAAACTCAAAATACGCC GATGTCTATGACAACGAAGCCATGGGCAATACCGGTGGTATTTTGGTATTCGATTTACCTATTGGTAACCACAGATACGG CTCGAGCGTACGTATATTCAATAACAAGATCTTTGACAACAATACTAAAAACTTTGCTAACGCTTCAGCCAACCCAGCTG GGGTTCATATTGTTCCGCCCGGAACCGGTATGATTATCCTCTCGACCGATGACGTGGAGATCTTCAACAACGAGATAACC AACCACGATACCATGGGTGTAACTATCTCAAGTTTCTTCATCGCCGAACCTGATATCTCAACCTTTGTCGCCAACTATGG CCAGCCAGGTCAACCCATCGAAGATGGCTGGCGTCCAACCCCACGCAATATCTATATTCACGATAATGTGATTGAAGGCT ATGGCCAAAAGCCAAACGGTTATCTTATCGATGATATTATCAAAGGCTACCTGTTTACCCACGGTCAGTTCCCTGGAGTA CTTTACGATGGCTTAGGTGAACTACTTTCTAACAATGGTACTGCGGCTTATTTAGGGCTTAAAGAACTGCCATTTGCAGC AGATGGTAGCGATAATATCTGTGCCAGCAATAATGGTGATGTCTCGTTTGGACGTTTATACGCAAATGACAATACCGATA TGGCCAGCCCTGAATTTCTATTTGAGAAAACCCAAAGCGACATCATGGATTGCCAGCAGGTGAGTCTGCCTGTACATACC GTGACCTTTGGAGAGCAAATCTTCGGTTGTGGCGTCGATGACGAAACCGAAGGCTGTGATGGCGGTAATCAAGTTGGCGG CGGTGGCAGCATCGGCGAAAACGAAGGTGGCCTAGATGGTGATGGCGATCTTAGTCTGTGTATGGCCGAGGGCTCTAATG CCTCTTGGGACGCATTACTAAAAGCCAACTGCCCTAACCTGTCTGACTACAATCTATTCGCTGACATGAAGAACCCTGCG GATGCGCCCAACTCGGGCGGTATGCCTTACGATATGAATACCCAGCTATTTACCGATTATTCGAGTAAGTATCGCTATGT ATTTGTACCTGAAGGTCAAAAAGCCAGCTACTCAGAGCACGAGTCATTCGAGTTCCCTGTAGGTAGCGTTATCGTCAAGT CTTTCGCTCTACCAGCTGACACCAACAAACGTGGCATTGCGAACGAAGAACTGGTTGAAACTCGCCTATTGATCAAGCGT GAAACCGGATGGACTGCCCTCCCCTATGTCTGGAATGCCGAAAAATCTGACGCTGTACTAGCTAAAGCTGGAGCTATCCA AGGTAAAAGCGTCATGCACAATGGCACAGACATGGAGTTTGACTATGTCGTACCAAGCATGAACCAGTGTAAACAGTGCC ATCAGTTGAAAGCCGATGCTGACAGCCCTGCTAAGTTCGCCCCTATCGGCACTAAGGCTCGTAACCTCAATAAGGATTAC ACCTATAGTGATGGCACCATGAACCAGCTACTAAAGTGGCAAGCAGCTGGCATATTGCAAGGCGTACCAGAGCTAGCAAA TGTTGATGCAGTACCAGCCTATAACGATGGCGATGAGATCAACCTTGCCGCAATGTCTGACACTGAACTGATGAACACGG CTAAGGGATACTTAGACATCAACTGTGCCCATTGTCACCGTCCTGAAGGTAATGCCTCTAACACAGGTTTGAAACTTGAG TACTGGAGAGCCTACGATGAAGATGCGGGTCTATCTCACGGTACCTGTAAGTCTCCCGTCGCTTATGGCGGTGGATCACT TGGCTACGATATCGTACCGGGTAAGCCTGAGGAGTCGATTCTGCACTTTAGAATGGAGACAAATGATCCAGGTGACAGAA TGCCAGAGATTGGTCGTAGCTTATCTCACGCAGAGGGTGTCGCCCTTATCAACGAGTGGATTAAGCGCCTACCTCAAGCA AGCTGCTCTAACTAG
Upstream 100 bases:
>100_bases TAACACAATGTTAATGAATTGTTGTCCACATTTCACATTGCTTATCTTGTACGCCAGTGCAATCTAGTAGTCGCATAATA AAAATAATTTTGGAGACGCT
Downstream 100 bases:
>100_bases CATGCAAAGCTAATTTGCACTGCTAATTTGCACAGCTAGTATCAAAAACTAAGAGCCATAAACGCTCTTATCGATAAAAA GGCCGGGGACTCCCGGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 884; Mature: 884
Protein sequence:
>884_residues MLNKKPSWLMPTLIASAVAISLGACSSDDDEPNVVEDDTAVVAPTPEPGPTFPDGAIMIEAGENLTIRIQEALINAQSDD VIVLPKGNFEIASTLLFDGDVDGDGSYAKNVTIMGYGMEETVLDFSKANSGDGIFVQNALNIIIQDLSVNEAKNNGIKLK NTNGIILRRLATVWEGELDEGNGAYGLYPVECENILIEDTYVRGSADAGIYVGQSEYIVVRRNIAKENVAGIEIENSKYA DVYDNEAMGNTGGILVFDLPIGNHRYGSSVRIFNNKIFDNNTKNFANASANPAGVHIVPPGTGMIILSTDDVEIFNNEIT NHDTMGVTISSFFIAEPDISTFVANYGQPGQPIEDGWRPTPRNIYIHDNVIEGYGQKPNGYLIDDIIKGYLFTHGQFPGV LYDGLGELLSNNGTAAYLGLKELPFAADGSDNICASNNGDVSFGRLYANDNTDMASPEFLFEKTQSDIMDCQQVSLPVHT VTFGEQIFGCGVDDETEGCDGGNQVGGGGSIGENEGGLDGDGDLSLCMAEGSNASWDALLKANCPNLSDYNLFADMKNPA DAPNSGGMPYDMNTQLFTDYSSKYRYVFVPEGQKASYSEHESFEFPVGSVIVKSFALPADTNKRGIANEELVETRLLIKR ETGWTALPYVWNAEKSDAVLAKAGAIQGKSVMHNGTDMEFDYVVPSMNQCKQCHQLKADADSPAKFAPIGTKARNLNKDY TYSDGTMNQLLKWQAAGILQGVPELANVDAVPAYNDGDEINLAAMSDTELMNTAKGYLDINCAHCHRPEGNASNTGLKLE YWRAYDEDAGLSHGTCKSPVAYGGGSLGYDIVPGKPEESILHFRMETNDPGDRMPEIGRSLSHAEGVALINEWIKRLPQA SCSN
Sequences:
>Translated_884_residues MLNKKPSWLMPTLIASAVAISLGACSSDDDEPNVVEDDTAVVAPTPEPGPTFPDGAIMIEAGENLTIRIQEALINAQSDD VIVLPKGNFEIASTLLFDGDVDGDGSYAKNVTIMGYGMEETVLDFSKANSGDGIFVQNALNIIIQDLSVNEAKNNGIKLK NTNGIILRRLATVWEGELDEGNGAYGLYPVECENILIEDTYVRGSADAGIYVGQSEYIVVRRNIAKENVAGIEIENSKYA DVYDNEAMGNTGGILVFDLPIGNHRYGSSVRIFNNKIFDNNTKNFANASANPAGVHIVPPGTGMIILSTDDVEIFNNEIT NHDTMGVTISSFFIAEPDISTFVANYGQPGQPIEDGWRPTPRNIYIHDNVIEGYGQKPNGYLIDDIIKGYLFTHGQFPGV LYDGLGELLSNNGTAAYLGLKELPFAADGSDNICASNNGDVSFGRLYANDNTDMASPEFLFEKTQSDIMDCQQVSLPVHT VTFGEQIFGCGVDDETEGCDGGNQVGGGGSIGENEGGLDGDGDLSLCMAEGSNASWDALLKANCPNLSDYNLFADMKNPA DAPNSGGMPYDMNTQLFTDYSSKYRYVFVPEGQKASYSEHESFEFPVGSVIVKSFALPADTNKRGIANEELVETRLLIKR ETGWTALPYVWNAEKSDAVLAKAGAIQGKSVMHNGTDMEFDYVVPSMNQCKQCHQLKADADSPAKFAPIGTKARNLNKDY TYSDGTMNQLLKWQAAGILQGVPELANVDAVPAYNDGDEINLAAMSDTELMNTAKGYLDINCAHCHRPEGNASNTGLKLE YWRAYDEDAGLSHGTCKSPVAYGGGSLGYDIVPGKPEESILHFRMETNDPGDRMPEIGRSLSHAEGVALINEWIKRLPQA SCSN >Mature_884_residues MLNKKPSWLMPTLIASAVAISLGACSSDDDEPNVVEDDTAVVAPTPEPGPTFPDGAIMIEAGENLTIRIQEALINAQSDD VIVLPKGNFEIASTLLFDGDVDGDGSYAKNVTIMGYGMEETVLDFSKANSGDGIFVQNALNIIIQDLSVNEAKNNGIKLK NTNGIILRRLATVWEGELDEGNGAYGLYPVECENILIEDTYVRGSADAGIYVGQSEYIVVRRNIAKENVAGIEIENSKYA DVYDNEAMGNTGGILVFDLPIGNHRYGSSVRIFNNKIFDNNTKNFANASANPAGVHIVPPGTGMIILSTDDVEIFNNEIT NHDTMGVTISSFFIAEPDISTFVANYGQPGQPIEDGWRPTPRNIYIHDNVIEGYGQKPNGYLIDDIIKGYLFTHGQFPGV LYDGLGELLSNNGTAAYLGLKELPFAADGSDNICASNNGDVSFGRLYANDNTDMASPEFLFEKTQSDIMDCQQVSLPVHT VTFGEQIFGCGVDDETEGCDGGNQVGGGGSIGENEGGLDGDGDLSLCMAEGSNASWDALLKANCPNLSDYNLFADMKNPA DAPNSGGMPYDMNTQLFTDYSSKYRYVFVPEGQKASYSEHESFEFPVGSVIVKSFALPADTNKRGIANEELVETRLLIKR ETGWTALPYVWNAEKSDAVLAKAGAIQGKSVMHNGTDMEFDYVVPSMNQCKQCHQLKADADSPAKFAPIGTKARNLNKDY TYSDGTMNQLLKWQAAGILQGVPELANVDAVPAYNDGDEINLAAMSDTELMNTAKGYLDINCAHCHRPEGNASNTGLKLE YWRAYDEDAGLSHGTCKSPVAYGGGSLGYDIVPGKPEESILHFRMETNDPGDRMPEIGRSLSHAEGVALINEWIKRLPQA SCSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95441; Mature: 95441
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNKKPSWLMPTLIASAVAISLGACSSDDDEPNVVEDDTAVVAPTPEPGPTFPDGAIMIE CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCCEEEEE AGENLTIRIQEALINAQSDDVIVLPKGNFEIASTLLFDGDVDGDGSYAKNVTIMGYGMEE CCCCEEEEEEHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCHH TVLDFSKANSGDGIFVQNALNIIIQDLSVNEAKNNGIKLKNTNGIILRRLATVWEGELDE HHHHHHCCCCCCCEEEECEEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCC GNGAYGLYPVECENILIEDTYVRGSADAGIYVGQSEYIVVRRNIAKENVAGIEIENSKYA CCCEEEEEEECCCEEEEEEEEEECCCCCCEEECCCCEEEEEECCCCCCCCEEEECCCEEC DVYDNEAMGNTGGILVFDLPIGNHRYGSSVRIFNNKIFDNNTKNFANASANPAGVHIVPP CCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECEECCCCCCCCCCCCCCCCEEEEECC GTGMIILSTDDVEIFNNEITNHDTMGVTISSFFIAEPDISTFVANYGQPGQPIEDGWRPT CCCEEEEECCCEEEECCCCCCCCCCEEEEEEEEEECCCHHHHHHCCCCCCCCHHCCCCCC PRNIYIHDNVIEGYGQKPNGYLIDDIIKGYLFTHGQFPGVLYDGLGELLSNNGTAAYLGL CCEEEEECCHHHCCCCCCCCEEHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCEEEEEH KELPFAADGSDNICASNNGDVSFGRLYANDNTDMASPEFLFEKTQSDIMDCQQVSLPVHT HHCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE VTFGEQIFGCGVDDETEGCDGGNQVGGGGSIGENEGGLDGDGDLSLCMAEGSNASWDALL EEECCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEE KANCPNLSDYNLFADMKNPADAPNSGGMPYDMNTQLFTDYSSKYRYVFVPEGQKASYSEH ECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCC ESFEFPVGSVIVKSFALPADTNKRGIANEELVETRLLIKRETGWTALPYVWNAEKSDAVL CCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEEEEECCCCEECCEEECCCCCCEEE AKAGAIQGKSVMHNGTDMEFDYVVPSMNQCKQCHQLKADADSPAKFAPIGTKARNLNKDY EECCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEECCCCCHHHCCCCCC TYSDGTMNQLLKWQAAGILQGVPELANVDAVPAYNDGDEINLAAMSDTELMNTAKGYLDI EECCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEEECCHHHHHCCCCEEEE NCAHCHRPEGNASNTGLKLEYWRAYDEDAGLSHGTCKSPVAYGGGSLGYDIVPGKPEESI EEHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE LHFRMETNDPGDRMPEIGRSLSHAEGVALINEWIKRLPQASCSN EEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLNKKPSWLMPTLIASAVAISLGACSSDDDEPNVVEDDTAVVAPTPEPGPTFPDGAIMIE CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCCEEEEE AGENLTIRIQEALINAQSDDVIVLPKGNFEIASTLLFDGDVDGDGSYAKNVTIMGYGMEE CCCCEEEEEEHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCHH TVLDFSKANSGDGIFVQNALNIIIQDLSVNEAKNNGIKLKNTNGIILRRLATVWEGELDE HHHHHHCCCCCCCEEEECEEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCC GNGAYGLYPVECENILIEDTYVRGSADAGIYVGQSEYIVVRRNIAKENVAGIEIENSKYA CCCEEEEEEECCCEEEEEEEEEECCCCCCEEECCCCEEEEEECCCCCCCCEEEECCCEEC DVYDNEAMGNTGGILVFDLPIGNHRYGSSVRIFNNKIFDNNTKNFANASANPAGVHIVPP CCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECEECCCCCCCCCCCCCCCCEEEEECC GTGMIILSTDDVEIFNNEITNHDTMGVTISSFFIAEPDISTFVANYGQPGQPIEDGWRPT CCCEEEEECCCEEEECCCCCCCCCCEEEEEEEEEECCCHHHHHHCCCCCCCCHHCCCCCC PRNIYIHDNVIEGYGQKPNGYLIDDIIKGYLFTHGQFPGVLYDGLGELLSNNGTAAYLGL CCEEEEECCHHHCCCCCCCCEEHHHHHHHHEEECCCCCCHHHHHHHHHHCCCCCEEEEEH KELPFAADGSDNICASNNGDVSFGRLYANDNTDMASPEFLFEKTQSDIMDCQQVSLPVHT HHCCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE VTFGEQIFGCGVDDETEGCDGGNQVGGGGSIGENEGGLDGDGDLSLCMAEGSNASWDALL EEECCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEE KANCPNLSDYNLFADMKNPADAPNSGGMPYDMNTQLFTDYSSKYRYVFVPEGQKASYSEH ECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCC ESFEFPVGSVIVKSFALPADTNKRGIANEELVETRLLIKRETGWTALPYVWNAEKSDAVL CCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEEEEECCCCEECCEEECCCCCCEEE AKAGAIQGKSVMHNGTDMEFDYVVPSMNQCKQCHQLKADADSPAKFAPIGTKARNLNKDY EECCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCEECCCCCHHHCCCCCC TYSDGTMNQLLKWQAAGILQGVPELANVDAVPAYNDGDEINLAAMSDTELMNTAKGYLDI EECCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEEECCHHHHHCCCCEEEE NCAHCHRPEGNASNTGLKLEYWRAYDEDAGLSHGTCKSPVAYGGGSLGYDIVPGKPEESI EEHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE LHFRMETNDPGDRMPEIGRSLSHAEGVALINEWIKRLPQASCSN EEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA