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The map label for this gene is oruR [H]

Identifier: 157961482

GI number: 157961482

Start: 2005072

End: 2006100

Strand: Direct

Name: oruR [H]

Synonym: Spea_1656

Alternate gene names: 157961482

Gene position: 2005072-2006100 (Clockwise)

Preceding gene: 157961481

Following gene: 157961486

Centisome position: 38.75

GC content: 45.77

Gene sequence:

>1029_bases
ATGCAACAAGCCTGTAGCTATAAACCGCATATGAGAGTCGGCGACCAATCCTATCCAGCCTATGAACTGAAAAACCTCAT
AGGTTACCTTAAGTTGTATTTTTCTCATGAGCTTGTTGAGCAGCTTTATACTGATATTGGAATCGGTGAAGCAGAGCTCA
TGCTGAGTCAACATGTGTATGTGTGGCAGGTTGATTATGCCATGAGTTACATTCGTAACTTAACTCAAGATGCTGAAGTG
GCGGCCAAGGCCGCATCGGCTTATAAGGTTAACGATCTCGAACCCTTGTTGCCCCATTTAGCCCAATTTAAGACGTTAGG
TGAATGTTTGCAGTTTGCCGTTTCTCACCCAGAATTGGTTGGCAGTTTTTCTGATACCCTACTTAGAAATAATGATGGCT
GTTTGCACGTCAGATGGTTAAACACCAATCGTGTCGATATCGAGCGATACAGCTGCCAATTTCAGCATAGTGTCTGTTCA
CTGTTAGCCTTTGCTAAGGAGCTGACAGGTGAGGCGATAAGCGTCTCACATCTCGCCCTTGCTGAGCCTTATCGTGAAGC
TAAATTTTTAACGGCGCAGTCGGGAACTGAGATCGTATTTGATGCGGAATTTTTCGAGTGGTCGATTGAACACCGCTACC
TAGCGCTACCCATTACCTTTGAGTTTGTTGCTGAGCAGGGCGAGCGTTGTATTGATAACTCACGCTCCTATATTGCAGAG
CTATTGGCGATTCTACGACAGCAAGCCCCTGCATTACCAAACATGGAGGAGATGGCTGGCTTGCAAAATATTAGCGCTAG
AACCTTAAGGCGTAGATTGGCCGCTGCCAACACCAGCTACCAGAAACTGGTGGACCAAGTGCGCTGTCAGATGGCGATTG
ACTTGATTCTAACTAGCGACTATTCAATCGATGAAATTTCCGATCTCATGGGGTTTGGCGATGTTAGCCATTTTAGACAG
AGCTTTAAGCATTGGATTGGTCATCCCCCCGGACACTTTCATAGGCTTAATCGCCCTTTAACGAATTAA

Upstream 100 bases:

>100_bases
GAAGGTAAGCATGTTTTTTAAGCTTAATTTCATAAAAGGCTATTAATTCTTATTTAGATCCGCTAAAAATATTGTCACCT
TTCAACTGTTATTGAGTGTA

Downstream 100 bases:

>100_bases
AGGGCGCAGTCATTACTTTATTGCTGACAATTACCAAGCTCAGGCGCCATTTCATCAATCCACAGCTCTATGAGTGCTAC
AGCGTCTGTATGAGCTATGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MQQACSYKPHMRVGDQSYPAYELKNLIGYLKLYFSHELVEQLYTDIGIGEAELMLSQHVYVWQVDYAMSYIRNLTQDAEV
AAKAASAYKVNDLEPLLPHLAQFKTLGECLQFAVSHPELVGSFSDTLLRNNDGCLHVRWLNTNRVDIERYSCQFQHSVCS
LLAFAKELTGEAISVSHLALAEPYREAKFLTAQSGTEIVFDAEFFEWSIEHRYLALPITFEFVAEQGERCIDNSRSYIAE
LLAILRQQAPALPNMEEMAGLQNISARTLRRRLAAANTSYQKLVDQVRCQMAIDLILTSDYSIDEISDLMGFGDVSHFRQ
SFKHWIGHPPGHFHRLNRPLTN

Sequences:

>Translated_342_residues
MQQACSYKPHMRVGDQSYPAYELKNLIGYLKLYFSHELVEQLYTDIGIGEAELMLSQHVYVWQVDYAMSYIRNLTQDAEV
AAKAASAYKVNDLEPLLPHLAQFKTLGECLQFAVSHPELVGSFSDTLLRNNDGCLHVRWLNTNRVDIERYSCQFQHSVCS
LLAFAKELTGEAISVSHLALAEPYREAKFLTAQSGTEIVFDAEFFEWSIEHRYLALPITFEFVAEQGERCIDNSRSYIAE
LLAILRQQAPALPNMEEMAGLQNISARTLRRRLAAANTSYQKLVDQVRCQMAIDLILTSDYSIDEISDLMGFGDVSHFRQ
SFKHWIGHPPGHFHRLNRPLTN
>Mature_342_residues
MQQACSYKPHMRVGDQSYPAYELKNLIGYLKLYFSHELVEQLYTDIGIGEAELMLSQHVYVWQVDYAMSYIRNLTQDAEV
AAKAASAYKVNDLEPLLPHLAQFKTLGECLQFAVSHPELVGSFSDTLLRNNDGCLHVRWLNTNRVDIERYSCQFQHSVCS
LLAFAKELTGEAISVSHLALAEPYREAKFLTAQSGTEIVFDAEFFEWSIEHRYLALPITFEFVAEQGERCIDNSRSYIAE
LLAILRQQAPALPNMEEMAGLQNISARTLRRRLAAANTSYQKLVDQVRCQMAIDLILTSDYSIDEISDLMGFGDVSHFRQ
SFKHWIGHPPGHFHRLNRPLTN

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39033; Mature: 39033

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQACSYKPHMRVGDQSYPAYELKNLIGYLKLYFSHELVEQLYTDIGIGEAELMLSQHVY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEE
VWQVDYAMSYIRNLTQDAEVAAKAASAYKVNDLEPLLPHLAQFKTLGECLQFAVSHPELV
EEEHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
GSFSDTLLRNNDGCLHVRWLNTNRVDIERYSCQFQHSVCSLLAFAKELTGEAISVSHLAL
HHHHHHHHCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AEPYREAKFLTAQSGTEIVFDAEFFEWSIEHRYLALPITFEFVAEQGERCIDNSRSYIAE
HCHHHHHHEEEECCCCEEEEEHHHHHEEECCEEEEEEHHHHHHHHHHHHHHHCHHHHHHH
LLAILRQQAPALPNMEEMAGLQNISARTLRRRLAAANTSYQKLVDQVRCQMAIDLILTSD
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECC
YSIDEISDLMGFGDVSHFRQSFKHWIGHPPGHFHRLNRPLTN
CCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MQQACSYKPHMRVGDQSYPAYELKNLIGYLKLYFSHELVEQLYTDIGIGEAELMLSQHVY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEE
VWQVDYAMSYIRNLTQDAEVAAKAASAYKVNDLEPLLPHLAQFKTLGECLQFAVSHPELV
EEEHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
GSFSDTLLRNNDGCLHVRWLNTNRVDIERYSCQFQHSVCSLLAFAKELTGEAISVSHLAL
HHHHHHHHCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AEPYREAKFLTAQSGTEIVFDAEFFEWSIEHRYLALPITFEFVAEQGERCIDNSRSYIAE
HCHHHHHHEEEECCCCEEEEEHHHHHEEECCEEEEEEHHHHHHHHHHHHHHHCHHHHHHH
LLAILRQQAPALPNMEEMAGLQNISARTLRRRLAAANTSYQKLVDQVRCQMAIDLILTSD
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEECC
YSIDEISDLMGFGDVSHFRQSFKHWIGHPPGHFHRLNRPLTN
CCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]