Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157961480

Identifier: 157961480

GI number: 157961480

Start: 2002234

End: 2002935

Strand: Direct

Name: 157961480

Synonym: Spea_1654

Alternate gene names: NA

Gene position: 2002234-2002935 (Clockwise)

Preceding gene: 157961479

Following gene: 157961481

Centisome position: 38.69

GC content: 35.75

Gene sequence:

>702_bases
ATGAATTTATACAGCACGCTTGGTTTTTTGAACACAATCTTTATACTCATTAGCTTAATCGGTGTATTTTCTCAACTACA
AAAAATATGGAAGAGAAAGAAGGATCTAGAAACAAAAGATAATAGTTCTGAACTACTATCTTTAAATCAATTCTCGGTAA
GTTTTTTGGCCTACTTTTCGTTTTTCATCTACGGGTATAGTATCGAACCATTTAACCATTATATCGTTTGGCCTCGGCTT
ATAGCATCATTACTAGTGGGTCTTATATTATTTGAAATTTGGCAAGACCGAAAAAATAAGTCATCTACAGCTTGTTTATC
AGTTGCTATAGCGATCTTCATTCTAGGTAGTTTAGGGCTTAGCTTTGGTAACATTTATACCGACGAAAGCAAATTAATTT
CAAGTAGCCTAATTGTTGTTGTCACCTTGCTAATTGCTCAAGGCTATTATCACCAGATTATGTTGATTGCTCGCTCAGGA
CAAACAGGAGCTGTCGATCTAAGAATGAGTCAATTCATTCTAATGATGGATATCTCAACTATAGCTTTTGCTCTCAGCAT
GGGATTGAGCGATGGTTGGCCGTTATTCGTTCTTGCAACAGTCAGTGGAATTACTAAACTGAACATCATGTTCTTATTTC
GCTGGGTTAGGCTAAGTAAAACCGCTCAGCAACGTAGAAATGCATATTTAGCATTAACTTAA

Upstream 100 bases:

>100_bases
ACCACTTATTGTCGACATTATAGTGGGAATTCATAGTATTTATGTGACAAAAAGGCTAGCCCAACGTAAGGTTGTCGACA
AAACAACAAAAGGGAACTTT

Downstream 100 bases:

>100_bases
CAACAGCATATTGCGGCTTTGTTTCCTAAATTGAATTAACGAACAAAGCCCTCAAATATTCGATCTCTTAACAGCTAAGT
AAGTTTCAGACGAGTGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MNLYSTLGFLNTIFILISLIGVFSQLQKIWKRKKDLETKDNSSELLSLNQFSVSFLAYFSFFIYGYSIEPFNHYIVWPRL
IASLLVGLILFEIWQDRKNKSSTACLSVAIAIFILGSLGLSFGNIYTDESKLISSSLIVVVTLLIAQGYYHQIMLIARSG
QTGAVDLRMSQFILMMDISTIAFALSMGLSDGWPLFVLATVSGITKLNIMFLFRWVRLSKTAQQRRNAYLALT

Sequences:

>Translated_233_residues
MNLYSTLGFLNTIFILISLIGVFSQLQKIWKRKKDLETKDNSSELLSLNQFSVSFLAYFSFFIYGYSIEPFNHYIVWPRL
IASLLVGLILFEIWQDRKNKSSTACLSVAIAIFILGSLGLSFGNIYTDESKLISSSLIVVVTLLIAQGYYHQIMLIARSG
QTGAVDLRMSQFILMMDISTIAFALSMGLSDGWPLFVLATVSGITKLNIMFLFRWVRLSKTAQQRRNAYLALT
>Mature_233_residues
MNLYSTLGFLNTIFILISLIGVFSQLQKIWKRKKDLETKDNSSELLSLNQFSVSFLAYFSFFIYGYSIEPFNHYIVWPRL
IASLLVGLILFEIWQDRKNKSSTACLSVAIAIFILGSLGLSFGNIYTDESKLISSSLIVVVTLLIAQGYYHQIMLIARSG
QTGAVDLRMSQFILMMDISTIAFALSMGLSDGWPLFVLATVSGITKLNIMFLFRWVRLSKTAQQRRNAYLALT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26348; Mature: 26348

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLYSTLGFLNTIFILISLIGVFSQLQKIWKRKKDLETKDNSSELLSLNQFSVSFLAYFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
FFIYGYSIEPFNHYIVWPRLIASLLVGLILFEIWQDRKNKSSTACLSVAIAIFILGSLGL
HHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SFGNIYTDESKLISSSLIVVVTLLIAQGYYHQIMLIARSGQTGAVDLRMSQFILMMDIST
HHCCEECCHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCEEEHHHHHHHHHHHHHH
IAFALSMGLSDGWPLFVLATVSGITKLNIMFLFRWVRLSKTAQQRRNAYLALT
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure
MNLYSTLGFLNTIFILISLIGVFSQLQKIWKRKKDLETKDNSSELLSLNQFSVSFLAYFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
FFIYGYSIEPFNHYIVWPRLIASLLVGLILFEIWQDRKNKSSTACLSVAIAIFILGSLGL
HHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SFGNIYTDESKLISSSLIVVVTLLIAQGYYHQIMLIARSGQTGAVDLRMSQFILMMDIST
HHCCEECCHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCEEEHHHHHHHHHHHHHH
IAFALSMGLSDGWPLFVLATVSGITKLNIMFLFRWVRLSKTAQQRRNAYLALT
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA