| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961476
Identifier: 157961476
GI number: 157961476
Start: 1993853
End: 1996351
Strand: Direct
Name: 157961476
Synonym: Spea_1650
Alternate gene names: NA
Gene position: 1993853-1996351 (Clockwise)
Preceding gene: 157961474
Following gene: 157961477
Centisome position: 38.53
GC content: 46.3
Gene sequence:
>2499_bases ATGAAAAAACTCTTTTTGGGCGTAGCAATCACCTCTGCATTAGGTTTAACCGCTTGTAGTGAAGACAGTTATAATGAATT AGTGGATAAAACTGAGCCTTTGGTTCCTCAGTCAGTTATCGTTTTTGATCCGGGAAATGGTGAGTTACCACTACCCAATG ATATTCTCTTTAGCGGCACGACCGATGGCACTATTAACATTCCTAAAAGTGATGATCCCACAGCGCCAAGTGAAGAGAAC GGCGATTATACTGATCCGAGTATCGCACTCGGTGCGCTAGATGGTTGGTCGACAACGGCGCCAATCAGTATTGAAGTCGC CCCAGCCATGGATAACGATGGCGCTATGCTGACGCTAAGTAAAGCATCGGTTGAGCAGCCTGGCGCAGTCAAGATGTTTG AAGCCACGGTTGGTGGCGCCTTATCATCGGATCCAGAGTGTAAAGCACTGCCAGATATTACAGCCTGTAAGGTTGGCGCA GAGCTGCAGTTTGGTGTGGACTTTGTGAGCACCACTTCTGGTAATACCATCGTCATCGTTCCATTAAAGCCGCTTAAATC TAATCAATCTTATGTTTATGCTACAACCGGTCTTATCCAAGACTCTGCGGGTCGATCTATTTCTCCGTCTTCAACATATG GCTTATTAAAGCTTGATATCGAAACCAAGCCACTACAGACTCCCGAGCAACTCGCGCTGCAAGCGGCAGTAAACAGTTAT GAAAAAGGTATGGCTGGAGCGGGAGTTGACTCTGAATCAATAAGTTATTCAGGCCTGTTCACCACTCAGTCAGTCGCCGA TGTGTATGAAGTATCAAAACTACTGATCGCAGGTGACCCTGACTATATGCCAGAGTTTGTACAGATGCCAACAGACAGTG GCTATACATTAGCACAAGCTTTGATGATGCCAGAACAGCACCCAGCATATGAAGGTGCAAGTAAGGTCAATGTTTGGTCT GCTGCAATTAAACTACCTGTTTACGGTGATTGTTCATCTACTGAATGTCTAGATGCTGAAGGTAATCCAACGATTAATGG TATCTGGTCTGCGGCTTATGACAGCCCGGTCTCAGTGTTAAAAGCCCTTGAAAGCGGCACCTTGAGTCAAGAGAGCTATT TCACTCAAGCCATTGAGAATGGAATAGAGGATCCAATTGCTGCGCTGAGCGATCCTGCTCAACTGGCGGGTAAGCATTGG ATGTTAGATGATGGCACTGCCGTTGATAAAGCAAGACACCTAACTAAGTTTAACCCCATTCCAGAGGTTAAAAATTACGA AGTAGTACCAGTGCAAATGACAGTGCCAAACTATGCGCCTGCTCCAGCAACTGGCTGGCCAGTGACAATTGCCATGCATG GTTTAGGTGGCGGTAAAGAGATGGCGTTTGCTTTCGCGGGCACTTATGGTGAACTTGGCGTAGCCACAATCGCAATTGAT ATGCCACTTCACGGCGCTCGCTCATTTGGTAAGGGCTTACTGGTTCCTGGTGCTTATACTGTTTCGGCAACGGATCCTGC CTATGGTGCAGTTATTGGTGACGATGTTCTTTTCTCAATGGGTGACCCGTTAGCTTTCATTAATATCGGTAGTACATTGA CTGTGCGTGATAACTTCCGTCAGGCGACATTTGATCATTTAGCCCTTCGCGCCGCGTTTACCGGTTATGCTGGCAAGCTA ATGGAGTTACAAGCGCCTCAATTATTTGATATTAATAAATTTAGTGCTCAAGGCTTGAGTCTAGGTGCTATCGTTGGCAC TAACTTTGCCACTTACGCTAGCACAGGCCTGACTCATCCATCTGGAGCTGATTTAAGCCACGTTTATAAACTTAATGCTA CGTCACTCGTCGCCCCATCGGGTGGATTTGCTGGAACCTTTATCGGCTCAGCGACATTTGGTCCTATGCTGTTTGAAAAC ATAGTGGCGACAGAAGCATTTATGGCGTTAGTCGATGAAGCGAACAAAGATTTAGGTTATCTACCTGATACGCCTGAATA CGATGCGTTAGTTAAGTCCGTGTATGATGCATTTTTACCGACATTTGCTTTTGCGGTTCAAACGGCTGTTGATAGTGCAG ATCCGATTAACCACGCAGCTATGCTTAAGTCTACTGGACTTCCACTTCACTTAATTGAAGTTGTCGGTGATGGAGCAAAC AGTCTTCCTGATCAGACACTACCTAATAGTGTTGCAGGTTTCCCTACTTCAGGTACAGAACCTTTGATTGCAAACCTAGG GCTTGCATGTATTGATAGCACAACTGTTGGCTCAGGAGCTGTACGTTTCTCTAAAGGCCATCACAGCTCGCTAGTTGACC CATCGCCAGTTGATGGAGTTACAGATGGTTTTGAAGATATTGCAACGGTAGAGATGCAAACTCAGGCCGCTTTCTTCTCA CACAGTGCAGGGATCCCTACAGCCGATAGCCCGACTATTTATCTAGGTCTAGTCACAGAGGAAGCTGCACAATATGTTGT GGCACCCTGTGCCCAGTAA
Upstream 100 bases:
>100_bases TAAGGACTAACAATAAGTCCTCTTGGTCATACTCTGCTGACTATTGTGACCAATTTCTAAGTGAAAACAAAATTATTACA ACAAGATTTGGGGAAAAAAG
Downstream 100 bases:
>100_bases TTTACATAAAATTACGCACAGTAAAACCTAGAATTGTGTAAAAAAAGACCCAGCGAAAGCTGGGTTTTTTATTGCCATGT TTTATTGGTAAATAGACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Extracellular Lipase; Lipoprotein; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Extracellular Lipase Pla-1/Cef Family
Number of amino acids: Translated: 832; Mature: 832
Protein sequence:
>832_residues MKKLFLGVAITSALGLTACSEDSYNELVDKTEPLVPQSVIVFDPGNGELPLPNDILFSGTTDGTINIPKSDDPTAPSEEN GDYTDPSIALGALDGWSTTAPISIEVAPAMDNDGAMLTLSKASVEQPGAVKMFEATVGGALSSDPECKALPDITACKVGA ELQFGVDFVSTTSGNTIVIVPLKPLKSNQSYVYATTGLIQDSAGRSISPSSTYGLLKLDIETKPLQTPEQLALQAAVNSY EKGMAGAGVDSESISYSGLFTTQSVADVYEVSKLLIAGDPDYMPEFVQMPTDSGYTLAQALMMPEQHPAYEGASKVNVWS AAIKLPVYGDCSSTECLDAEGNPTINGIWSAAYDSPVSVLKALESGTLSQESYFTQAIENGIEDPIAALSDPAQLAGKHW MLDDGTAVDKARHLTKFNPIPEVKNYEVVPVQMTVPNYAPAPATGWPVTIAMHGLGGGKEMAFAFAGTYGELGVATIAID MPLHGARSFGKGLLVPGAYTVSATDPAYGAVIGDDVLFSMGDPLAFINIGSTLTVRDNFRQATFDHLALRAAFTGYAGKL MELQAPQLFDINKFSAQGLSLGAIVGTNFATYASTGLTHPSGADLSHVYKLNATSLVAPSGGFAGTFIGSATFGPMLFEN IVATEAFMALVDEANKDLGYLPDTPEYDALVKSVYDAFLPTFAFAVQTAVDSADPINHAAMLKSTGLPLHLIEVVGDGAN SLPDQTLPNSVAGFPTSGTEPLIANLGLACIDSTTVGSGAVRFSKGHHSSLVDPSPVDGVTDGFEDIATVEMQTQAAFFS HSAGIPTADSPTIYLGLVTEEAAQYVVAPCAQ
Sequences:
>Translated_832_residues MKKLFLGVAITSALGLTACSEDSYNELVDKTEPLVPQSVIVFDPGNGELPLPNDILFSGTTDGTINIPKSDDPTAPSEEN GDYTDPSIALGALDGWSTTAPISIEVAPAMDNDGAMLTLSKASVEQPGAVKMFEATVGGALSSDPECKALPDITACKVGA ELQFGVDFVSTTSGNTIVIVPLKPLKSNQSYVYATTGLIQDSAGRSISPSSTYGLLKLDIETKPLQTPEQLALQAAVNSY EKGMAGAGVDSESISYSGLFTTQSVADVYEVSKLLIAGDPDYMPEFVQMPTDSGYTLAQALMMPEQHPAYEGASKVNVWS AAIKLPVYGDCSSTECLDAEGNPTINGIWSAAYDSPVSVLKALESGTLSQESYFTQAIENGIEDPIAALSDPAQLAGKHW MLDDGTAVDKARHLTKFNPIPEVKNYEVVPVQMTVPNYAPAPATGWPVTIAMHGLGGGKEMAFAFAGTYGELGVATIAID MPLHGARSFGKGLLVPGAYTVSATDPAYGAVIGDDVLFSMGDPLAFINIGSTLTVRDNFRQATFDHLALRAAFTGYAGKL MELQAPQLFDINKFSAQGLSLGAIVGTNFATYASTGLTHPSGADLSHVYKLNATSLVAPSGGFAGTFIGSATFGPMLFEN IVATEAFMALVDEANKDLGYLPDTPEYDALVKSVYDAFLPTFAFAVQTAVDSADPINHAAMLKSTGLPLHLIEVVGDGAN SLPDQTLPNSVAGFPTSGTEPLIANLGLACIDSTTVGSGAVRFSKGHHSSLVDPSPVDGVTDGFEDIATVEMQTQAAFFS HSAGIPTADSPTIYLGLVTEEAAQYVVAPCAQ >Mature_832_residues MKKLFLGVAITSALGLTACSEDSYNELVDKTEPLVPQSVIVFDPGNGELPLPNDILFSGTTDGTINIPKSDDPTAPSEEN GDYTDPSIALGALDGWSTTAPISIEVAPAMDNDGAMLTLSKASVEQPGAVKMFEATVGGALSSDPECKALPDITACKVGA ELQFGVDFVSTTSGNTIVIVPLKPLKSNQSYVYATTGLIQDSAGRSISPSSTYGLLKLDIETKPLQTPEQLALQAAVNSY EKGMAGAGVDSESISYSGLFTTQSVADVYEVSKLLIAGDPDYMPEFVQMPTDSGYTLAQALMMPEQHPAYEGASKVNVWS AAIKLPVYGDCSSTECLDAEGNPTINGIWSAAYDSPVSVLKALESGTLSQESYFTQAIENGIEDPIAALSDPAQLAGKHW MLDDGTAVDKARHLTKFNPIPEVKNYEVVPVQMTVPNYAPAPATGWPVTIAMHGLGGGKEMAFAFAGTYGELGVATIAID MPLHGARSFGKGLLVPGAYTVSATDPAYGAVIGDDVLFSMGDPLAFINIGSTLTVRDNFRQATFDHLALRAAFTGYAGKL MELQAPQLFDINKFSAQGLSLGAIVGTNFATYASTGLTHPSGADLSHVYKLNATSLVAPSGGFAGTFIGSATFGPMLFEN IVATEAFMALVDEANKDLGYLPDTPEYDALVKSVYDAFLPTFAFAVQTAVDSADPINHAAMLKSTGLPLHLIEVVGDGAN SLPDQTLPNSVAGFPTSGTEPLIANLGLACIDSTTVGSGAVRFSKGHHSSLVDPSPVDGVTDGFEDIATVEMQTQAAFFS HSAGIPTADSPTIYLGLVTEEAAQYVVAPCAQ
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86821; Mature: 86821
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFLGVAITSALGLTACSEDSYNELVDKTEPLVPQSVIVFDPGNGELPLPNDILFSGT CCEEEEEHHHHHHHCCEECCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEECC TDGTINIPKSDDPTAPSEENGDYTDPSIALGALDGWSTTAPISIEVAPAMDNDGAMLTLS CCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEE KASVEQPGAVKMFEATVGGALSSDPECKALPDITACKVGAELQFGVDFVSTTSGNTIVIV CCCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCHHEEECCEEEECCEEEEECCCCEEEEE PLKPLKSNQSYVYATTGLIQDSAGRSISPSSTYGLLKLDIETKPLQTPEQLALQAAVNSY ECCCCCCCCCEEEEEECEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH EKGMAGAGVDSESISYSGLFTTQSVADVYEVSKLLIAGDPDYMPEFVQMPTDSGYTLAQA HCCCCCCCCCCCCCEECEEECHHHHHHHHHHHHEEEECCCCCCCHHHCCCCCCCHHHHHH LMMPEQHPAYEGASKVNVWSAAIKLPVYGDCSSTECLDAEGNPTINGIWSAAYDSPVSVL HHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCEECCCCCCCEEEEEECCCCCHHHHH KALESGTLSQESYFTQAIENGIEDPIAALSDPAQLAGKHWMLDDGTAVDKARHLTKFNPI HHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHHCCCEEEECCCCHHHHHHHHHHCCCC PEVKNYEVVPVQMTVPNYAPAPATGWPVTIAMHGLGGGKEMAFAFAGTYGELGVATIAID CCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCEEEEEEE MPLHGARSFGKGLLVPGAYTVSATDPAYGAVIGDDVLFSMGDPLAFINIGSTLTVRDNFR CCCCCHHHHCCEEECCCEEEEECCCCCCCEEECCCHHEECCCCEEEEECCCEEEECCCCH QATFDHLALRAAFTGYAGKLMELQAPQLFDINKFSAQGLSLGAIVGTNFATYASTGLTHP HHHHHHHHHHHHHHCCCCEEEEECCCCEECCCCCCCCCCEEEEEECCCCHHHHHCCCCCC SGADLSHVYKLNATSLVAPSGGFAGTFIGSATFGPMLFENIVATEAFMALVDEANKDLGY CCCCCCEEEEECCCEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LPDTPEYDALVKSVYDAFLPTFAFAVQTAVDSADPINHAAMLKSTGLPLHLIEVVGDGAN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEECCCCC SLPDQTLPNSVAGFPTSGTEPLIANLGLACIDSTTVGSGAVRFSKGHHSSLVDPSPVDGV CCCCCCCCCCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCC TDGFEDIATVEMQTQAAFFSHSAGIPTADSPTIYLGLVTEEAAQYVVAPCAQ CCCHHHHEEEEEHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHHHCCCCCC >Mature Secondary Structure MKKLFLGVAITSALGLTACSEDSYNELVDKTEPLVPQSVIVFDPGNGELPLPNDILFSGT CCEEEEEHHHHHHHCCEECCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEECC TDGTINIPKSDDPTAPSEENGDYTDPSIALGALDGWSTTAPISIEVAPAMDNDGAMLTLS CCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEE KASVEQPGAVKMFEATVGGALSSDPECKALPDITACKVGAELQFGVDFVSTTSGNTIVIV CCCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCHHEEECCEEEECCEEEEECCCCEEEEE PLKPLKSNQSYVYATTGLIQDSAGRSISPSSTYGLLKLDIETKPLQTPEQLALQAAVNSY ECCCCCCCCCEEEEEECEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH EKGMAGAGVDSESISYSGLFTTQSVADVYEVSKLLIAGDPDYMPEFVQMPTDSGYTLAQA HCCCCCCCCCCCCCEECEEECHHHHHHHHHHHHEEEECCCCCCCHHHCCCCCCCHHHHHH LMMPEQHPAYEGASKVNVWSAAIKLPVYGDCSSTECLDAEGNPTINGIWSAAYDSPVSVL HHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCEECCCCCCCEEEEEECCCCCHHHHH KALESGTLSQESYFTQAIENGIEDPIAALSDPAQLAGKHWMLDDGTAVDKARHLTKFNPI HHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCHHHCCCEEEECCCCHHHHHHHHHHCCCC PEVKNYEVVPVQMTVPNYAPAPATGWPVTIAMHGLGGGKEMAFAFAGTYGELGVATIAID CCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCEEEEEEE MPLHGARSFGKGLLVPGAYTVSATDPAYGAVIGDDVLFSMGDPLAFINIGSTLTVRDNFR CCCCCHHHHCCEEECCCEEEEECCCCCCCEEECCCHHEECCCCEEEEECCCEEEECCCCH QATFDHLALRAAFTGYAGKLMELQAPQLFDINKFSAQGLSLGAIVGTNFATYASTGLTHP HHHHHHHHHHHHHHCCCCEEEEECCCCEECCCCCCCCCCEEEEEECCCCHHHHHCCCCCC SGADLSHVYKLNATSLVAPSGGFAGTFIGSATFGPMLFENIVATEAFMALVDEANKDLGY CCCCCCEEEEECCCEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LPDTPEYDALVKSVYDAFLPTFAFAVQTAVDSADPINHAAMLKSTGLPLHLIEVVGDGAN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEECCCCC SLPDQTLPNSVAGFPTSGTEPLIANLGLACIDSTTVGSGAVRFSKGHHSSLVDPSPVDGV CCCCCCCCCCCCCCCCCCCCHHHHHCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCC TDGFEDIATVEMQTQAAFFSHSAGIPTADSPTIYLGLVTEEAAQYVVAPCAQ CCCHHHHEEEEEHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA