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The map label for this gene is scpB [H]

Identifier: 157961473

GI number: 157961473

Start: 1991272

End: 1991868

Strand: Direct

Name: scpB [H]

Synonym: Spea_1647

Alternate gene names: 157961473

Gene position: 1991272-1991868 (Clockwise)

Preceding gene: 157961472

Following gene: 157961474

Centisome position: 38.48

GC content: 44.22

Gene sequence:

>597_bases
TTGTCTCAGATAAATCCAGATCAGCTTAAACAGTTAATTGAGGCTAGCCTATTTGTGCTGGCCAAGCCGATGACGATAAA
AGCATTAAAAGAGACGGTATTGTCTAGTTTTAATGTGTCGCGGGCTAAAATTAAGGCATGTATCGAAGAGTTACAGCTCG
ATTATGAAAATCGAGGTGTACAATTAGTAAAGGTTGCGGGAGGGTATCGATTTCAGACATTGGCTGAATTGAGTCCTTTT
TTACAGCCGCTATGGCAAGAGAAAGCACCGAAGTATTCGCGTGCAACCTTAGAAACCCTGGCGGTGATTGCCTACCGTCA
ACCTGTCACACGAGGTGACATAGAATTTGTTCGTGGGGTTGCGATTAGCAGCCACATTATCAAGAGTTTAAACGATAGAA
ATTGGATAAAAGTAGTTGGCCATAAAGAGGTTCCGGGTAGACCGGCACTTTATGCAACCACCACCGAGTTTCTAGCTTAT
TTTGGCATTGACAGTATTGCGGATCTACCGCCTCTGTCAGATGCCAAATCATTGGACGCGCTGTTCCATGTTGAGAGCGG
CGTGACCGAAAAAACAGAAGAGTCTACTAATGAGTGA

Upstream 100 bases:

>100_bases
GGTAGTAAGCTTCTTAGCATTGATGGAGCTGGTTAAGGAATTGCTGGTTGAGCTTGTACAAGCTGAGCCATTTTCAACTA
TACATGTTAGGGCGTACTGA

Downstream 100 bases:

>100_bases
AAAATTGCAGAAAGTCTTGGCCCGTGCAGGCCATGGCTCCCGTCGTGAGATGGAGGCATGGATTGCTGCAGGTCGAGTTA
GTGTTGACGGCGAAATTGCA

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSQINPDQLKQLIEASLFVLAKPMTIKALKETVLSSFNVSRAKIKACIEELQLDYENRGVQLVKVAGGYRFQTLAELSPF
LQPLWQEKAPKYSRATLETLAVIAYRQPVTRGDIEFVRGVAISSHIIKSLNDRNWIKVVGHKEVPGRPALYATTTEFLAY
FGIDSIADLPPLSDAKSLDALFHVESGVTEKTEESTNE

Sequences:

>Translated_198_residues
MSQINPDQLKQLIEASLFVLAKPMTIKALKETVLSSFNVSRAKIKACIEELQLDYENRGVQLVKVAGGYRFQTLAELSPF
LQPLWQEKAPKYSRATLETLAVIAYRQPVTRGDIEFVRGVAISSHIIKSLNDRNWIKVVGHKEVPGRPALYATTTEFLAY
FGIDSIADLPPLSDAKSLDALFHVESGVTEKTEESTNE
>Mature_197_residues
SQINPDQLKQLIEASLFVLAKPMTIKALKETVLSSFNVSRAKIKACIEELQLDYENRGVQLVKVAGGYRFQTLAELSPFL
QPLWQEKAPKYSRATLETLAVIAYRQPVTRGDIEFVRGVAISSHIIKSLNDRNWIKVVGHKEVPGRPALYATTTEFLAYF
GIDSIADLPPLSDAKSLDALFHVESGVTEKTEESTNE

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 22080; Mature: 21948

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQINPDQLKQLIEASLFVLAKPMTIKALKETVLSSFNVSRAKIKACIEELQLDYENRGV
CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCE
QLVKVAGGYRFQTLAELSPFLQPLWQEKAPKYSRATLETLAVIAYRQPVTRGDIEFVRGV
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AISSHIIKSLNDRNWIKVVGHKEVPGRPALYATTTEFLAYFGIDSIADLPPLSDAKSLDA
HHHHHHHHHCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCHHHHCCCCCCCHHHHHH
LFHVESGVTEKTEESTNE
HHHHHCCCCHHCCCCCCC
>Mature Secondary Structure 
SQINPDQLKQLIEASLFVLAKPMTIKALKETVLSSFNVSRAKIKACIEELQLDYENRGV
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCE
QLVKVAGGYRFQTLAELSPFLQPLWQEKAPKYSRATLETLAVIAYRQPVTRGDIEFVRGV
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AISSHIIKSLNDRNWIKVVGHKEVPGRPALYATTTEFLAYFGIDSIADLPPLSDAKSLDA
HHHHHHHHHCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCHHHHCCCCCCCHHHHHH
LFHVESGVTEKTEESTNE
HHHHHCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]