| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961391
Identifier: 157961391
GI number: 157961391
Start: 1901963
End: 1902373
Strand: Direct
Name: 157961391
Synonym: Spea_1565
Alternate gene names: NA
Gene position: 1901963-1902373 (Clockwise)
Preceding gene: 157961389
Following gene: 157961396
Centisome position: 36.76
GC content: 33.82
Gene sequence:
>411_bases ATGAAGTTATTTTTGAAGAAATTAATGTTACTGGCGGGCTGGATTCTATTAAGTTTTAATCTGGGGGCCGATGCCGGCGA TAGCGCTGTTTACGGCTCATTAATGCCTTTTGGGCCATCATTTATGGCTGGAGAGTACGTTAGCTTTGGCTTTTGGTCTA ATGACATTGAACTTTATATGATGCTTTTTTGGTTTTTAGGCTTAATTACCTTCCTATTGAATCGTAAATTATTAGTTCTC TATATTTCAGCGTTAATTTTTACTCAAATAATATTTATAAAAACGGTTAATGATGAGTTATTAACATTGACTGGTTACGC GTTACTTATTCCAATAGAAGTGTGCTATTTAATTACCTGTTTTTTATTACTGAAAAAGCATCCAGTCGAGAGTATAGACA GCTATGTTTAA
Upstream 100 bases:
>100_bases GCTGTTGTGTTGCAAAGTCTGACTCGCTATTGAAGTTGAGTTTGAAATTTTTGCACTTAGGTATATTAACGATTCAGCTG CAGTGATGTGAATACAAAAT
Downstream 100 bases:
>100_bases CCGCTTATATGTGGCCTCTCAGCTCTCGTACCACTATGCGATGGGCGGTCACTGTAGTATCAGTAACTGCCCATCATTTT TCCTATTTAGCCTATAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MKLFLKKLMLLAGWILLSFNLGADAGDSAVYGSLMPFGPSFMAGEYVSFGFWSNDIELYMMLFWFLGLITFLLNRKLLVL YISALIFTQIIFIKTVNDELLTLTGYALLIPIEVCYLITCFLLLKKHPVESIDSYV
Sequences:
>Translated_136_residues MKLFLKKLMLLAGWILLSFNLGADAGDSAVYGSLMPFGPSFMAGEYVSFGFWSNDIELYMMLFWFLGLITFLLNRKLLVL YISALIFTQIIFIKTVNDELLTLTGYALLIPIEVCYLITCFLLLKKHPVESIDSYV >Mature_136_residues MKLFLKKLMLLAGWILLSFNLGADAGDSAVYGSLMPFGPSFMAGEYVSFGFWSNDIELYMMLFWFLGLITFLLNRKLLVL YISALIFTQIIFIKTVNDELLTLTGYALLIPIEVCYLITCFLLLKKHPVESIDSYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15485; Mature: 15485
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFLKKLMLLAGWILLSFNLGADAGDSAVYGSLMPFGPSFMAGEYVSFGFWSNDIELYM CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCHHEECCCCCCHHHHH MLFWFLGLITFLLNRKLLVLYISALIFTQIIFIKTVNDELLTLTGYALLIPIEVCYLITC HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FLLLKKHPVESIDSYV HHHHHCCCHHHHCCCC >Mature Secondary Structure MKLFLKKLMLLAGWILLSFNLGADAGDSAVYGSLMPFGPSFMAGEYVSFGFWSNDIELYM CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCHHEECCCCCCHHHHH MLFWFLGLITFLLNRKLLVLYISALIFTQIIFIKTVNDELLTLTGYALLIPIEVCYLITC HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH FLLLKKHPVESIDSYV HHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA