| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is tgt [H]
Identifier: 157961296
GI number: 157961296
Start: 1793152
End: 1794285
Strand: Direct
Name: tgt [H]
Synonym: Spea_1470
Alternate gene names: 157961296
Gene position: 1793152-1794285 (Clockwise)
Preceding gene: 157961295
Following gene: 157961297
Centisome position: 34.65
GC content: 45.15
Gene sequence:
>1134_bases ATGAAATTTGAATTAGATACAACTCAAGGCCGCGCACGTCGTGGTCGTTTGATTTTTGAACGTGGTACGGTTGAAACGCC AGCGTTTATGCCTGTCGGTACTTACGGTACCGTTAAAGGTATGACGCCTGAAGAAGTGCGCGAAACTGGCGCAGACATTC TGCTTGGTAATACTTTCCACCTTTGGTTACGTCCAGGTGAAGAGATTATGCGTAAGCATGGCGACTTGCATGACTTCATG AATTGGCAACGTCCTATTTTGACCGACTCGGGTGGATTCCAGGTTTTTAGCTTGGGTGATATTCGTAAGATCACTGAAGA AGGCGTTCATTTCCGCTCACCAATTAACGGTGAAAAGATTTTCTTGGACCCAGAAAAGTCGATGCAAATTCAAGACTCAT TAGGCAGCGATGTAGTAATGATTTTTGACGAATGCACCCCGTACCCGGCAACTGAGGACGAAGCTCGTAAATCGATGCAG ATGTCACTTCGTTGGGCGCAGCGTTCACGCGATGAGTTTGACAGACTTGAAAACCCGAACTCTTTGTTCGGTATTATTCA AGGCGGTGTTTATGAAGACCTTCGTGACGAAAGCCTAAATGGCTTAGTCGACATTGGTTTTGATGGATACGCTGTTGGTG GTTTAGCAGTTGGCGAGCCAAAGGAAGACATGCACCGCATTCTTGAGCATGTTTGTCCAAAAATTCCAGCTGATAAACCT CGTTATTTGATGGGGGTCGGTAAGCCAGAAGATTTAGTTGAAGGCGTACGTCGCGGCGTGGACATGTTCGATTGTGTTAT GCCAACACGAAATGCTCGTAACGGTCATCTGTTTACCAGTGAAGGTGTTATTAAGATCCGTAATGCACGTCATCGCGATG ATACTTCACCACTCGATGATAAGTGTGATTGTTATACCTGTAAGAACTACTCTCGGGCATACCTTTACCACTTAGATCGT TGTAATGAGATTCTAGGTGCTCGATTAAACACCATTCATAACCTTCGCTATTACCAAAGATTGATGGAAGGTTTGCGTGG CGCTATCGAGACAGGTACATTAGACGCCTTTGTTACGGAATTCTATACCAGCCAAGGTCGAGAAGTACCTGAAGTTCCTG AATTATCCGATTAA
Upstream 100 bases:
>100_bases TAGGGTTGATACTGAATTGTTTGCCCTTATGTTTGTCATAATCTTAGACTCAAATACTTGAGTTAACTCAGGTCAGACTG TTTATCTGGCGAGGTGAAAA
Downstream 100 bases:
>100_bases TTTTTACTCAGACAATTAGAAGAGAATACTATGTTTATTTCAAACGCATATGCAGCTGATGCACCTGTTGGTGGCGCTGG TGGTACGATGGAACTGATTT
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKFELDTTQGRARRGRLIFERGTVETPAFMPVGTYGTVKGMTPEEVRETGADILLGNTFHLWLRPGEEIMRKHGDLHDFM NWQRPILTDSGGFQVFSLGDIRKITEEGVHFRSPINGEKIFLDPEKSMQIQDSLGSDVVMIFDECTPYPATEDEARKSMQ MSLRWAQRSRDEFDRLENPNSLFGIIQGGVYEDLRDESLNGLVDIGFDGYAVGGLAVGEPKEDMHRILEHVCPKIPADKP RYLMGVGKPEDLVEGVRRGVDMFDCVMPTRNARNGHLFTSEGVIKIRNARHRDDTSPLDDKCDCYTCKNYSRAYLYHLDR CNEILGARLNTIHNLRYYQRLMEGLRGAIETGTLDAFVTEFYTSQGREVPEVPELSD
Sequences:
>Translated_377_residues MKFELDTTQGRARRGRLIFERGTVETPAFMPVGTYGTVKGMTPEEVRETGADILLGNTFHLWLRPGEEIMRKHGDLHDFM NWQRPILTDSGGFQVFSLGDIRKITEEGVHFRSPINGEKIFLDPEKSMQIQDSLGSDVVMIFDECTPYPATEDEARKSMQ MSLRWAQRSRDEFDRLENPNSLFGIIQGGVYEDLRDESLNGLVDIGFDGYAVGGLAVGEPKEDMHRILEHVCPKIPADKP RYLMGVGKPEDLVEGVRRGVDMFDCVMPTRNARNGHLFTSEGVIKIRNARHRDDTSPLDDKCDCYTCKNYSRAYLYHLDR CNEILGARLNTIHNLRYYQRLMEGLRGAIETGTLDAFVTEFYTSQGREVPEVPELSD >Mature_377_residues MKFELDTTQGRARRGRLIFERGTVETPAFMPVGTYGTVKGMTPEEVRETGADILLGNTFHLWLRPGEEIMRKHGDLHDFM NWQRPILTDSGGFQVFSLGDIRKITEEGVHFRSPINGEKIFLDPEKSMQIQDSLGSDVVMIFDECTPYPATEDEARKSMQ MSLRWAQRSRDEFDRLENPNSLFGIIQGGVYEDLRDESLNGLVDIGFDGYAVGGLAVGEPKEDMHRILEHVCPKIPADKP RYLMGVGKPEDLVEGVRRGVDMFDCVMPTRNARNGHLFTSEGVIKIRNARHRDDTSPLDDKCDCYTCKNYSRAYLYHLDR CNEILGARLNTIHNLRYYQRLMEGLRGAIETGTLDAFVTEFYTSQGREVPEVPELSD
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=361, Percent_Identity=43.4903047091413, Blast_Score=307, Evalue=1e-83, Organism=Escherichia coli, GI1786607, Length=370, Percent_Identity=82.4324324324324, Blast_Score=650, Evalue=0.0, Organism=Caenorhabditis elegans, GI17544680, Length=379, Percent_Identity=41.1609498680739, Blast_Score=297, Evalue=6e-81, Organism=Caenorhabditis elegans, GI25146502, Length=165, Percent_Identity=31.5151515151515, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI19920510, Length=369, Percent_Identity=42.0054200542005, Blast_Score=310, Evalue=7e-85, Organism=Drosophila melanogaster, GI21355311, Length=255, Percent_Identity=25.8823529411765, Blast_Score=87, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 42913; Mature: 42913
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFELDTTQGRARRGRLIFERGTVETPAFMPVGTYGTVKGMTPEEVRETGADILLGNTFH CEEECCCCCCHHHCCCEEEECCCCCCCCCEECCCCCCCCCCCHHHHHHCCCCEEECCEEE LWLRPGEEIMRKHGDLHDFMNWQRPILTDSGGFQVFSLGDIRKITEEGVHFRSPINGEKI EEECCCHHHHHHCCCHHHHHCCCCCEEECCCCEEEEECCHHHHHHHCCCEECCCCCCCEE FLDPEKSMQIQDSLGSDVVMIFDECTPYPATEDEARKSMQMSLRWAQRSRDEFDRLENPN EECCCCCCHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SLFGIIQGGVYEDLRDESLNGLVDIGFDGYAVGGLAVGEPKEDMHRILEHVCPKIPADKP CEEEECCCCHHHHHHHHCCCCEEEECCCCEEECCEECCCCHHHHHHHHHHHCCCCCCCCC RYLMGVGKPEDLVEGVRRGVDMFDCVMPTRNARNGHLFTSEGVIKIRNARHRDDTSPLDD CEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCC KCDCYTCKNYSRAYLYHLDRCNEILGARLNTIHNLRYYQRLMEGLRGAIETGTLDAFVTE CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH FYTSQGREVPEVPELSD HHHHCCCCCCCCCCCCC >Mature Secondary Structure MKFELDTTQGRARRGRLIFERGTVETPAFMPVGTYGTVKGMTPEEVRETGADILLGNTFH CEEECCCCCCHHHCCCEEEECCCCCCCCCEECCCCCCCCCCCHHHHHHCCCCEEECCEEE LWLRPGEEIMRKHGDLHDFMNWQRPILTDSGGFQVFSLGDIRKITEEGVHFRSPINGEKI EEECCCHHHHHHCCCHHHHHCCCCCEEECCCCEEEEECCHHHHHHHCCCEECCCCCCCEE FLDPEKSMQIQDSLGSDVVMIFDECTPYPATEDEARKSMQMSLRWAQRSRDEFDRLENPN EECCCCCCHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SLFGIIQGGVYEDLRDESLNGLVDIGFDGYAVGGLAVGEPKEDMHRILEHVCPKIPADKP CEEEECCCCHHHHHHHHCCCCEEEECCCCEEECCEECCCCHHHHHHHHHHHCCCCCCCCC RYLMGVGKPEDLVEGVRRGVDMFDCVMPTRNARNGHLFTSEGVIKIRNARHRDDTSPLDD CEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCC KCDCYTCKNYSRAYLYHLDRCNEILGARLNTIHNLRYYQRLMEGLRGAIETGTLDAFVTE CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH FYTSQGREVPEVPELSD HHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA