| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is sstT [H]
Identifier: 157961290
GI number: 157961290
Start: 1786520
End: 1787743
Strand: Direct
Name: sstT [H]
Synonym: Spea_1464
Alternate gene names: 157961290
Gene position: 1786520-1787743 (Clockwise)
Preceding gene: 157961289
Following gene: 157961292
Centisome position: 34.52
GC content: 44.44
Gene sequence:
>1224_bases ATGAATCAAAAACCATCTTTGTTTGCCCGTTTGGCAGACGGCAGTTTAGTGTTACAAATTCTTGTAGGTATTATCGCTGG CGTTATTTTAGCAACCGTATCTAAATCCGGTGCTGAAAGTGTTGCGTTTTTAGGTCAGCTTTTTGTTGGTGCCTTAAAAG CAATCGCACCGATTTTAGTCTTTATCTTAGTAGCGGCATCGATTGCCAACCAAAAGAAAAATGCTAAAACCAATATGCGT CCAATTGTGATTCTGTATCTATTTGGTACTTTTTCGGCTGCGGTCACCGCTGTGTTGATGAGCTTTGCATTTCCGACCAC ACTAGCATTAACGCTAGATGCTGCTCAGGCAAGCCCACCAGAAGGGATCGGTGAAGTGATTCATACCTTGTTGTTTCAGC TAGTCGATAACCCAGTTAATGCGGTAATAACGGGTAACTATATCGGTATTCTAGCCTGGGGTGTAGGTCTAGGTTTAGCG CTACACCATGCAACAGATTCTACTAAGCTTGTGTTCGCCGATGTGAGCCATGGTGTATCGCAGATGGTGCGCTTTATTAT TCGTTTAGCACCTATTGGTATTTTTGGTTTAGTATCATCAACATTTGCTACCACAGGCTTTAGCGCAATAGCGGGTTATA TGCATCTGCTTCTCGTTCTTCTTGGGGCAATGGCGATCATGGCGCTGATCATAAACCCTGCGATTGTGTTTTTTAAAATA CGCCGTAACCCATATCCACTAGTGTTTACTTGTCTTCGTGAAAGTGGCGTAACAGCCTTCTTCACTCGCTCAAGTGCGGC GAATATTCCAGTGAATATGGCGTTATGTGAAAAGCTAAAACTGCATGAAGATACATACTCGGTTTCTATCCCTCTAGGCG CAACCATCAACATGGGTGGCGCAGCGATTACGATTACTATCCTAACGCTTGCGGCAGCCAACTCTATGGGCATTCAAGTG GATATTCTTACTGCCATTTTGCTAAGTGTTGTAGCGGGTGTTTCTGCTTGTGGTGCATCGGGTGTTGCTGGTGGCTCACT GTTACTGATTCCATTGGCATGTAGCCTGTTTGGTATTTCAAATGATGTAGCCATGCAGGTTGTTGCAGTAGGCTTTATCA TTGGTGTTATCCAAGATTCGGCTGAAACGGGTCTTAACAGTTCGACAGACGTTATCTTTACCGCGGCAGCTTGTGAAGCG GCAGAGAGAAAAGAAAACGCTTAA
Upstream 100 bases:
>100_bases CGATACAAACTGTTTCGAAGGAAGATTAATTTTATTTAAGGTTCGCCTAATGGTGGCTTAAATAGGATTACCACATATTA TAAAAACGACAGGTCAAGTA
Downstream 100 bases:
>100_bases ATCTGCGAAGCGATTAATAACGAAAAGCCCGCTCACTATGTGAGCGGGCTTTTTTTTTGTTTGCGAGTCTATCAGCTGTA GGGCATAAGAGTTTTATATT
Product: serine/threonine transporter SstT
Products: NA
Alternate protein names: Na(+)/serine-threonine symporter [H]
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MNQKPSLFARLADGSLVLQILVGIIAGVILATVSKSGAESVAFLGQLFVGALKAIAPILVFILVAASIANQKKNAKTNMR PIVILYLFGTFSAAVTAVLMSFAFPTTLALTLDAAQASPPEGIGEVIHTLLFQLVDNPVNAVITGNYIGILAWGVGLGLA LHHATDSTKLVFADVSHGVSQMVRFIIRLAPIGIFGLVSSTFATTGFSAIAGYMHLLLVLLGAMAIMALIINPAIVFFKI RRNPYPLVFTCLRESGVTAFFTRSSAANIPVNMALCEKLKLHEDTYSVSIPLGATINMGGAAITITILTLAAANSMGIQV DILTAILLSVVAGVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETGLNSSTDVIFTAAACEA AERKENA
Sequences:
>Translated_407_residues MNQKPSLFARLADGSLVLQILVGIIAGVILATVSKSGAESVAFLGQLFVGALKAIAPILVFILVAASIANQKKNAKTNMR PIVILYLFGTFSAAVTAVLMSFAFPTTLALTLDAAQASPPEGIGEVIHTLLFQLVDNPVNAVITGNYIGILAWGVGLGLA LHHATDSTKLVFADVSHGVSQMVRFIIRLAPIGIFGLVSSTFATTGFSAIAGYMHLLLVLLGAMAIMALIINPAIVFFKI RRNPYPLVFTCLRESGVTAFFTRSSAANIPVNMALCEKLKLHEDTYSVSIPLGATINMGGAAITITILTLAAANSMGIQV DILTAILLSVVAGVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETGLNSSTDVIFTAAACEA AERKENA >Mature_407_residues MNQKPSLFARLADGSLVLQILVGIIAGVILATVSKSGAESVAFLGQLFVGALKAIAPILVFILVAASIANQKKNAKTNMR PIVILYLFGTFSAAVTAVLMSFAFPTTLALTLDAAQASPPEGIGEVIHTLLFQLVDNPVNAVITGNYIGILAWGVGLGLA LHHATDSTKLVFADVSHGVSQMVRFIIRLAPIGIFGLVSSTFATTGFSAIAGYMHLLLVLLGAMAIMALIINPAIVFFKI RRNPYPLVFTCLRESGVTAFFTRSSAANIPVNMALCEKLKLHEDTYSVSIPLGATINMGGAAITITILTLAAANSMGIQV DILTAILLSVVAGVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETGLNSSTDVIFTAAACEA AERKENA
Specific function: Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system) [H]
COG id: COG3633
COG function: function code E; Na+/serine symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI223468566, Length=282, Percent_Identity=26.5957446808511, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI223468564, Length=270, Percent_Identity=26.2962962962963, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI4827012, Length=269, Percent_Identity=26.3940520446097, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI5032093, Length=279, Percent_Identity=26.5232974910394, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI1789473, Length=403, Percent_Identity=67.4937965260546, Blast_Score=534, Evalue=1e-153, Organism=Escherichia coli, GI1789947, Length=378, Percent_Identity=25.3968253968254, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1790514, Length=433, Percent_Identity=24.2494226327945, Blast_Score=72, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17537407, Length=443, Percent_Identity=25.0564334085779, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71996953, Length=285, Percent_Identity=24.5614035087719, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71983099, Length=276, Percent_Identity=25, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71983106, Length=276, Percent_Identity=25, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193206505, Length=249, Percent_Identity=26.1044176706827, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR023025 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 42090; Mature: 42090
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKPSLFARLADGSLVLQILVGIIAGVILATVSKSGAESVAFLGQLFVGALKAIAPILV CCCCCCHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH FILVAASIANQKKNAKTNMRPIVILYLFGTFSAAVTAVLMSFAFPTTLALTLDAAQASPP HHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCHHHHEEEEECCCCCCC EGIGEVIHTLLFQLVDNPVNAVITGNYIGILAWGVGLGLALHHATDSTKLVFADVSHGVS CHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHEEECCCCCEEEEEHHHHHHH QMVRFIIRLAPIGIFGLVSSTFATTGFSAIAGYMHLLLVLLGAMAIMALIINPAIVFFKI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE RRNPYPLVFTCLRESGVTAFFTRSSAANIPVNMALCEKLKLHEDTYSVSIPLGATINMGG CCCCCCEEEEEHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEECCC AAITITILTLAAANSMGIQVDILTAILLSVVAGVSACGASGVAGGSLLLIPLACSLFGIS HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC NDVAMQVVAVGFIIGVIQDSAETGLNSSTDVIFTAAACEAAERKENA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCC >Mature Secondary Structure MNQKPSLFARLADGSLVLQILVGIIAGVILATVSKSGAESVAFLGQLFVGALKAIAPILV CCCCCCHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH FILVAASIANQKKNAKTNMRPIVILYLFGTFSAAVTAVLMSFAFPTTLALTLDAAQASPP HHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCHHHHEEEEECCCCCCC EGIGEVIHTLLFQLVDNPVNAVITGNYIGILAWGVGLGLALHHATDSTKLVFADVSHGVS CHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHEEECCCCCEEEEEHHHHHHH QMVRFIIRLAPIGIFGLVSSTFATTGFSAIAGYMHLLLVLLGAMAIMALIINPAIVFFKI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE RRNPYPLVFTCLRESGVTAFFTRSSAANIPVNMALCEKLKLHEDTYSVSIPLGATINMGG CCCCCCEEEEEHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEECCC AAITITILTLAAANSMGIQVDILTAILLSVVAGVSACGASGVAGGSLLLIPLACSLFGIS HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC NDVAMQVVAVGFIIGVIQDSAETGLNSSTDVIFTAAACEAAERKENA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA