Click here to switch to the map view.

The map label for this gene is phnD [C]

Identifier: 157961259

GI number: 157961259

Start: 1742026

End: 1742889

Strand: Direct

Name: phnD [C]

Synonym: Spea_1433

Alternate gene names: 157961259

Gene position: 1742026-1742889 (Clockwise)

Preceding gene: 157961246

Following gene: 157961260

Centisome position: 33.67

GC content: 47.92

Gene sequence:

>864_bases
ATGTCTACCCTTAAATCCTTTACTAAAGTGCTTGTTCTATATTGGTTTATATTGATACCTAGTTATAGTTCGGCAACGGC
TATTGCTAGCATAGAGCCTAAGGTGCTGACCTTTGGTGTGGTGCCGCAGCAGGCGGCGAGTGTGTTAGCCAAGGTCTGGG
CGCCAGTGCTCGCTGAACTGTCGCAAAACGCGAATGTTGAATTGCAATTTGCAACTGCGCGAGATATTCCCACCTTTGAG
CAGCGTTTGGCTCAGGGGGAATATGATATTGCCTATATGAACCCCTATCATTTTACGGTATTTCACGAATCCCCTGGTTA
TCTTGCGTTAGCAAAAGAGCAAGATAAGTATTTAAGAGGCCTGATTGTTGTACGTAAAGAGTCACCTATATCCGCGCTGA
CAGAGCTTGATGGCAAATCGTTTGCCTTTCCTGCCCCGGCGGCGTTTGCTGCGAGTGTGATCCCCAGAGCTATTTTGAAA
CAGCAAGGCGTTGTTCACAGTACTAAGTACGTCGGCTCCCATGACTCTGTTTATCTTGCTGTCGCTCAAGGACTTGTCGA
TGCTGGTGGCGGGGTGGGGCGTACCTTCAAAAATATGGATACGGATGTGACAAAACAATTAAAGGTCCTATGGCGAACGC
CCGGTTACACTCCCCATGCTATCGCCACTCATCCCCGTGTTTCTCAGGAACTACGCGAAGTATTGTTAACTCAGTTACAG
GCTCTATCTAGCACGAGTAAAGGTCGAGCCCTGTTAGACGGTCTAGGCTTCAAAGCAATGGAAGCTGCGCAAAGTAGTGA
TTGGGATGATGTGCGTGCGTTATCTTTAAGTGAGCTAGACGAGCCGTTAAAGGAGAGTAACTAG

Upstream 100 bases:

>100_bases
AGGTTCACTCAACTGACCAGTAAATCAAGCCTTTAGGATTTTGGTATAGATATTGCTGAGATTAACTCATGGACTTCAGC
TGAAACGGGGAGTGAATGTG

Downstream 100 bases:

>100_bases
TGTCATTTCGGATAAAGACGATCCTCGGGATTGCTGTCATCGAAGGTGTGCTGCTAATGCTGCTGGTGTATACCAGTGTC
GATTATTTGAAAACCTCGAA

Product: phosphonate ABC transporter periplasmic phosphonate-binding protein

Products: 3-phospho-serine [Cytoplasm]; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]

Alternate protein names: Phosphate/Phosphonate ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MSTLKSFTKVLVLYWFILIPSYSSATAIASIEPKVLTFGVVPQQAASVLAKVWAPVLAELSQNANVELQFATARDIPTFE
QRLAQGEYDIAYMNPYHFTVFHESPGYLALAKEQDKYLRGLIVVRKESPISALTELDGKSFAFPAPAAFAASVIPRAILK
QQGVVHSTKYVGSHDSVYLAVAQGLVDAGGGVGRTFKNMDTDVTKQLKVLWRTPGYTPHAIATHPRVSQELREVLLTQLQ
ALSSTSKGRALLDGLGFKAMEAAQSSDWDDVRALSLSELDEPLKESN

Sequences:

>Translated_287_residues
MSTLKSFTKVLVLYWFILIPSYSSATAIASIEPKVLTFGVVPQQAASVLAKVWAPVLAELSQNANVELQFATARDIPTFE
QRLAQGEYDIAYMNPYHFTVFHESPGYLALAKEQDKYLRGLIVVRKESPISALTELDGKSFAFPAPAAFAASVIPRAILK
QQGVVHSTKYVGSHDSVYLAVAQGLVDAGGGVGRTFKNMDTDVTKQLKVLWRTPGYTPHAIATHPRVSQELREVLLTQLQ
ALSSTSKGRALLDGLGFKAMEAAQSSDWDDVRALSLSELDEPLKESN
>Mature_286_residues
STLKSFTKVLVLYWFILIPSYSSATAIASIEPKVLTFGVVPQQAASVLAKVWAPVLAELSQNANVELQFATARDIPTFEQ
RLAQGEYDIAYMNPYHFTVFHESPGYLALAKEQDKYLRGLIVVRKESPISALTELDGKSFAFPAPAAFAASVIPRAILKQ
QGVVHSTKYVGSHDSVYLAVAQGLVDAGGGVGRTFKNMDTDVTKQLKVLWRTPGYTPHAIATHPRVSQELREVLLTQLQA
LSSTSKGRALLDGLGFKAMEAAQSSDWDDVRALSLSELDEPLKESN

Specific function: Part Of The Binding-Protein-Dependent Transport System For Alkylphosphonates. [C]

COG id: COG3221

COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31342; Mature: 31211

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLKSFTKVLVLYWFILIPSYSSATAIASIEPKVLTFGVVPQQAASVLAKVWAPVLAEL
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHH
SQNANVELQFATARDIPTFEQRLAQGEYDIAYMNPYHFTVFHESPGYLALAKEQDKYLRG
CCCCCEEEEEECCCCCCHHHHHHHCCCCCEEEECCEEEEEEECCCCEEEEECHHHHHHHE
LIVVRKESPISALTELDGKSFAFPAPAAFAASVIPRAILKQQGVVHSTKYVGSHDSVYLA
EEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEHHHCCCCCCCCHHH
VAQGLVDAGGGVGRTFKNMDTDVTKQLKVLWRTPGYTPHAIATHPRVSQELREVLLTQLQ
HHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ALSSTSKGRALLDGLGFKAMEAAQSSDWDDVRALSLSELDEPLKESN
HHHCCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STLKSFTKVLVLYWFILIPSYSSATAIASIEPKVLTFGVVPQQAASVLAKVWAPVLAEL
CHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHH
SQNANVELQFATARDIPTFEQRLAQGEYDIAYMNPYHFTVFHESPGYLALAKEQDKYLRG
CCCCCEEEEEECCCCCCHHHHHHHCCCCCEEEECCEEEEEEECCCCEEEEECHHHHHHHE
LIVVRKESPISALTELDGKSFAFPAPAAFAASVIPRAILKQQGVVHSTKYVGSHDSVYLA
EEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEHHHCCCCCCCCHHH
VAQGLVDAGGGVGRTFKNMDTDVTKQLKVLWRTPGYTPHAIATHPRVSQELREVLLTQLQ
HHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ALSSTSKGRALLDGLGFKAMEAAQSSDWDDVRALSLSELDEPLKESN
HHHCCCCCHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]

Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA