Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157961256

Identifier: 157961256

GI number: 157961256

Start: 1739159

End: 1739524

Strand: Reverse

Name: 157961256

Synonym: Spea_1430

Alternate gene names: NA

Gene position: 1739524-1739159 (Counterclockwise)

Preceding gene: 157961257

Following gene: 157961255

Centisome position: 33.62

GC content: 43.72

Gene sequence:

>366_bases
ATGACTTTCTCTCAATTAGCACAAAATAATGCCTGTAAAATCACTCTGCCTGTTGAGGTCATAATGACACAAACTCCCAC
GCTCAGAGCGGCGATCTTACAACAAATAGACGCTGGGATGAGCCAACTCATAATTGACCTACACAAGGTCGAATATATCG
ATTCTAGTGGTCTGTCAGTGCTTATCTCAGCCTTAAAGCGAGTTGAAAAAGTCAATGGTGAAATCGTATTACTCTCTCCA
ACGGCTGGTGTACGCTCACTCATTGAATTGACTCGGTTACATCAGATCTTCGCTATCTATGAAGACGAAACCGCGGCAAT
AGACTACATCTGCAATGAGCTGACTAACGAGCAAGCAGCGCAGTAA

Upstream 100 bases:

>100_bases
GAAGATAAGCAAAAACAGTCAGTGAATAGCAGCTCAACAAGCTCCAGTAACAATTCAGATAACCAAACAAAATGCCCAGT
GCATTTTTAAGGACGGCAAT

Downstream 100 bases:

>100_bases
GGGACACGACTATGGGTCATATTCACGGCATACTGTTCACAACTCAAAAGATGCACTGCCAAGCAGGTAAAGCCTACAAG
GCTTTTGCCCTTGTGATGAG

Product: anti-sigma-factor antagonist

Products: NA

Alternate protein names: Anti-Sigma Factor Antagonist; Anti-Anti-Sigma Factor Family Protein; Anti Sigma Factor Antagonist; Anti-Anti-Sigma Factor Family

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MTFSQLAQNNACKITLPVEVIMTQTPTLRAAILQQIDAGMSQLIIDLHKVEYIDSSGLSVLISALKRVEKVNGEIVLLSP
TAGVRSLIELTRLHQIFAIYEDETAAIDYICNELTNEQAAQ

Sequences:

>Translated_121_residues
MTFSQLAQNNACKITLPVEVIMTQTPTLRAAILQQIDAGMSQLIIDLHKVEYIDSSGLSVLISALKRVEKVNGEIVLLSP
TAGVRSLIELTRLHQIFAIYEDETAAIDYICNELTNEQAAQ
>Mature_120_residues
TFSQLAQNNACKITLPVEVIMTQTPTLRAAILQQIDAGMSQLIIDLHKVEYIDSSGLSVLISALKRVEKVNGEIVLLSPT
AGVRSLIELTRLHQIFAIYEDETAAIDYICNELTNEQAAQ

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13329; Mature: 13197

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSQLAQNNACKITLPVEVIMTQTPTLRAAILQQIDAGMSQLIIDLHKVEYIDSSGLSV
CCHHHHHCCCCEEEEEEHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LISALKRVEKVNGEIVLLSPTAGVRSLIELTRLHQIFAIYEDETAAIDYICNELTNEQAA
HHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
Q
C
>Mature Secondary Structure 
TFSQLAQNNACKITLPVEVIMTQTPTLRAAILQQIDAGMSQLIIDLHKVEYIDSSGLSV
CHHHHHCCCCEEEEEEHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LISALKRVEKVNGEIVLLSPTAGVRSLIELTRLHQIFAIYEDETAAIDYICNELTNEQAA
HHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA