Click here to switch to the map view.

The map label for this gene is rfaB [C]

Identifier: 157961236

GI number: 157961236

Start: 1711365

End: 1712435

Strand: Direct

Name: rfaB [C]

Synonym: Spea_1409

Alternate gene names: 157961236

Gene position: 1711365-1712435 (Clockwise)

Preceding gene: 157961235

Following gene: 157961237

Centisome position: 33.07

GC content: 33.61

Gene sequence:

>1071_bases
ATGAAAATATTGTTTATACAAAACTCTATGGATGCCGGTGGAGTTTCAAAAGTTAACGCCATTTTAGCTAACGAGTTTAT
ACGGAAAAATTACAAGGTAGAATTTTTATCTTTTAAGAAATCTAGCGACAGTAGGTTTCATGTTCATAGCTTTAACTTCA
AAAAATATAAAGTCTTAGAATTGTTTGTCTCTTTTTTTAAGCTTATGTTCTTCTTAAGCGGTAATAAGTATGATTTAATT
ATTTCATCTTCCGATTTAATTTCTCTACCTGTCTGTTTGGCAAACTCATTTTATAAAAATAGGTTGATTGTTAATAGTCA
CACTAATGTTGTAGAACATTTGAAATCCGCTTCGACTGGAAAGGTTTTGCTATACCGGTTTTGCGGATTAGCTCACAGGT
ACGCAACGGTTGTTGCGAATGTTTCTTCTGGAGCTGTTTTGGCATCTCAAGACTTTTACAAAAATATAAATATTATTGAG
TTGCATAATCCAGTTGAACCTTTGGTTGAAAGAAAAATTAGTGAATTGAAGCATGAGTGGTTTGAGAATAACCGAGTTAT
TGTAGCGTGTGGCAGATTAACAAAAAGCAAGAACTACGAATTAATGATAGACGTTATGAAGTTGGTAGCCACTAGATTAT
CAGATGTACGTTTAATTATTCTTGGTGATGGTGAGCTATACGAGTCTTTAAGTTTTAAGGTAAAGGAATTAAAATTAGAA
AACTATGTATGCTTGCTAGGAAAGGTTAATAATCCTGTTGATTATATGAGCAGTAGCGAGTTTTTATTACATACATCTTT
TTATGAAGGTTCTCCAGCTGTTCTTTTGGAGGCAATGTCTGCGGGAATTCCTGCTGTAACAACCAGATTTAAGTCTGGGG
CTGAAGAGATTATAGGTAATGATGTTTATGGTATAATTTCCAACTCCTTTAAGGCAGATGATGTTTTTGATTCTATTTTG
AAAATGCTAGAAAGGGAAAAACTACCTAAGTCATTCTACCAAAATAGTGTTAAGCAATACTCCCCGGTTGCATGTTGCAA
TAGTTATCTTAATTCTGTTGGCTTGTCGTGA

Upstream 100 bases:

>100_bases
TTGAAGTAGTCTAAATTTTAAACAAGTTTATATTTGTAAATTAAATTTTCTTTGTGAATTTTAGTTAAGAACAGATTTTA
GTTTAGAGATAGGTTTAATT

Downstream 100 bases:

>100_bases
TTGGTTTCTATCGCTTTAATCTTCTGAGTTTCTGTTGTTTGACTATTAATGGTTTTTGACATGTTATTTAAAGCTTTAGT
GTTTCTTTTTCTGATGTACA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKILFIQNSMDAGGVSKVNAILANEFIRKNYKVEFLSFKKSSDSRFHVHSFNFKKYKVLELFVSFFKLMFFLSGNKYDLI
ISSSDLISLPVCLANSFYKNRLIVNSHTNVVEHLKSASTGKVLLYRFCGLAHRYATVVANVSSGAVLASQDFYKNINIIE
LHNPVEPLVERKISELKHEWFENNRVIVACGRLTKSKNYELMIDVMKLVATRLSDVRLIILGDGELYESLSFKVKELKLE
NYVCLLGKVNNPVDYMSSSEFLLHTSFYEGSPAVLLEAMSAGIPAVTTRFKSGAEEIIGNDVYGIISNSFKADDVFDSIL
KMLEREKLPKSFYQNSVKQYSPVACCNSYLNSVGLS

Sequences:

>Translated_356_residues
MKILFIQNSMDAGGVSKVNAILANEFIRKNYKVEFLSFKKSSDSRFHVHSFNFKKYKVLELFVSFFKLMFFLSGNKYDLI
ISSSDLISLPVCLANSFYKNRLIVNSHTNVVEHLKSASTGKVLLYRFCGLAHRYATVVANVSSGAVLASQDFYKNINIIE
LHNPVEPLVERKISELKHEWFENNRVIVACGRLTKSKNYELMIDVMKLVATRLSDVRLIILGDGELYESLSFKVKELKLE
NYVCLLGKVNNPVDYMSSSEFLLHTSFYEGSPAVLLEAMSAGIPAVTTRFKSGAEEIIGNDVYGIISNSFKADDVFDSIL
KMLEREKLPKSFYQNSVKQYSPVACCNSYLNSVGLS
>Mature_356_residues
MKILFIQNSMDAGGVSKVNAILANEFIRKNYKVEFLSFKKSSDSRFHVHSFNFKKYKVLELFVSFFKLMFFLSGNKYDLI
ISSSDLISLPVCLANSFYKNRLIVNSHTNVVEHLKSASTGKVLLYRFCGLAHRYATVVANVSSGAVLASQDFYKNINIIE
LHNPVEPLVERKISELKHEWFENNRVIVACGRLTKSKNYELMIDVMKLVATRLSDVRLIILGDGELYESLSFKVKELKLE
NYVCLLGKVNNPVDYMSSSEFLLHTSFYEGSPAVLLEAMSAGIPAVTTRFKSGAEEIIGNDVYGIISNSFKADDVFDSIL
KMLEREKLPKSFYQNSVKQYSPVACCNSYLNSVGLS

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 40207; Mature: 40207

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILFIQNSMDAGGVSKVNAILANEFIRKNYKVEFLSFKKSSDSRFHVHSFNFKKYKVLE
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCHHHHHH
LFVSFFKLMFFLSGNKYDLIISSSDLISLPVCLANSFYKNRLIVNSHTNVVEHLKSASTG
HHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCEEEEECCHHHHHHHHCCCCC
KVLLYRFCGLAHRYATVVANVSSGAVLASQDFYKNINIIELHNPVEPLVERKISELKHEW
HHHHHHHHHHHHHHHHHEEECCCCEEEECHHHHCCCCEEEECCCHHHHHHHHHHHHHHHH
FENNRVIVACGRLTKSKNYELMIDVMKLVATRLSDVRLIILGDGELYESLSFKVKELKLE
HCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHEEEEEC
NYVCLLGKVNNPVDYMSSSEFLLHTSFYEGSPAVLLEAMSAGIPAVTTRFKSGAEEIIGN
CEEEEEECCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHCC
DVYGIISNSFKADDVFDSILKMLEREKLPKSFYQNSVKQYSPVACCNSYLNSVGLS
CCEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKILFIQNSMDAGGVSKVNAILANEFIRKNYKVEFLSFKKSSDSRFHVHSFNFKKYKVLE
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEECCCCHHHHHH
LFVSFFKLMFFLSGNKYDLIISSSDLISLPVCLANSFYKNRLIVNSHTNVVEHLKSASTG
HHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCEEEEECCHHHHHHHHCCCCC
KVLLYRFCGLAHRYATVVANVSSGAVLASQDFYKNINIIELHNPVEPLVERKISELKHEW
HHHHHHHHHHHHHHHHHEEECCCCEEEECHHHHCCCCEEEECCCHHHHHHHHHHHHHHHH
FENNRVIVACGRLTKSKNYELMIDVMKLVATRLSDVRLIILGDGELYESLSFKVKELKLE
HCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHEEEEEC
NYVCLLGKVNNPVDYMSSSEFLLHTSFYEGSPAVLLEAMSAGIPAVTTRFKSGAEEIIGN
CEEEEEECCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHCC
DVYGIISNSFKADDVFDSILKMLEREKLPKSFYQNSVKQYSPVACCNSYLNSVGLS
CCEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]