| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961234
Identifier: 157961234
GI number: 157961234
Start: 1708496
End: 1709797
Strand: Direct
Name: 157961234
Synonym: Spea_1407
Alternate gene names: NA
Gene position: 1708496-1709797 (Clockwise)
Preceding gene: 157961233
Following gene: 157961235
Centisome position: 33.02
GC content: 31.72
Gene sequence:
>1302_bases ATGACTCTAATGATTCGTAAGTATTTAAAAAGTATTTCTTGGCTTAGGATTCTAGTTATTAAATGTCGAAGGGTTTCCTA TTACTTTCGTGTCAAATTTCTTATTAGGTTAGCAAAGTTATATCAAGAAAGAGAAATTAAGAGGATTCAGAATAATACTA TAGAAGGTAAGAAAATAAATGTTGTTTTTTTAGTTTTGTATCGGAGTATTTGGAAGGTAGACCTAGTTTTCAAAGAGATG ATGAAGGATGAACGGTATAATCCGTGCATCGTTGTTATACCAAGAACTAACACGGTAGACCCTCTATCGGAAGCTAAAGA AACGTACGAATATTTCAAAAGTAAAGGCTATAAAACTAAGCTTGCATATCAAGATGGTAAATGGCAAGACTTAGAGTTGG TTAATAAAATAGATTTGGTTTTTTTTAGCATCCCTTATAAAAACACTGAAGATAAGTATTTAATAAACTCTCTTTATAGG AAAGTGTGTTGTTACGTTCCATATTTTGAACAAATAGATAAAGATTATGACGTTCATTTTAATGGGCTTACTGAGAATCT GTGTTGGAAAATATTTCAAATCAATAAAATTCACAAAGATATCGCAGCGAAGTTTTCTTATAATAAAGGTATGAATATAG ATGTCGTAGGCTATACTGCTACCGAGCCTTTATATAATGACTCCATAGTAGAAAGTAATCCGTGGAAGTGTAAGAATCTT AAAAAAATCATTATAGCTCCACATCATAGTATCGATAAAAATACAGATCTAAGTAACGCTACGTTCTTAGAAACATACAA AACTTTACAATTGCTACCTAAATTATATGAAAATTATGCGTGTTTCGCCTTTAAACCCCATCCTTTATTAAAAGAGAAGT TATATGAGCACCCAGAGTGGGGGATAGAGAGAACAAATAAATATTGGAAGTTTTGGGAAGAACAGCATAATACGCAAATT GAAAATGCTGGTTACATCGACCTATTTAAATCTTCTGATGCAATGATTCATGACTGTTCATCTTTTATTATTGAGTACTT ATATGTAAATAAACCCTGCTTGTATCTGAACCCTAATGTTAGAAATCAGTTGAATGCTTATGGAGTGATAGGCTTTGATG CAATAACAAAGTCCTACTGTAATAATGATATTATCGATTTTGTTGAAAAAGTTATTTCAGGAGTTGCAGATGCGCCTCAA TATGAACAAAATGTTAGCTTGATACCTCAGGCGTCTCCATCAAAGAGTGTTATGCGCATATTAAATTCAGAGCTTTTTAA GATAAAAGATAACGAAATATAG
Upstream 100 bases:
>100_bases ATATTGGTCAATAATGGCTGGTTAGAAATAGATACAGTTGAAGATCTTGAACTGTACGAGAATATGCATAATAGCGGTCG TTTATCTCATTTCTACAAGT
Downstream 100 bases:
>100_bases ATTGGTAGAAAATGTCACTTAAAAGCAAAGCCCTTTATGGCGTAGCTTGGAGTATATTTGATAAACTTGTTAATCATTTG GGGAGTTTTCTACTCCTTAT
Product: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MTLMIRKYLKSISWLRILVIKCRRVSYYFRVKFLIRLAKLYQEREIKRIQNNTIEGKKINVVFLVLYRSIWKVDLVFKEM MKDERYNPCIVVIPRTNTVDPLSEAKETYEYFKSKGYKTKLAYQDGKWQDLELVNKIDLVFFSIPYKNTEDKYLINSLYR KVCCYVPYFEQIDKDYDVHFNGLTENLCWKIFQINKIHKDIAAKFSYNKGMNIDVVGYTATEPLYNDSIVESNPWKCKNL KKIIIAPHHSIDKNTDLSNATFLETYKTLQLLPKLYENYACFAFKPHPLLKEKLYEHPEWGIERTNKYWKFWEEQHNTQI ENAGYIDLFKSSDAMIHDCSSFIIEYLYVNKPCLYLNPNVRNQLNAYGVIGFDAITKSYCNNDIIDFVEKVISGVADAPQ YEQNVSLIPQASPSKSVMRILNSELFKIKDNEI
Sequences:
>Translated_433_residues MTLMIRKYLKSISWLRILVIKCRRVSYYFRVKFLIRLAKLYQEREIKRIQNNTIEGKKINVVFLVLYRSIWKVDLVFKEM MKDERYNPCIVVIPRTNTVDPLSEAKETYEYFKSKGYKTKLAYQDGKWQDLELVNKIDLVFFSIPYKNTEDKYLINSLYR KVCCYVPYFEQIDKDYDVHFNGLTENLCWKIFQINKIHKDIAAKFSYNKGMNIDVVGYTATEPLYNDSIVESNPWKCKNL KKIIIAPHHSIDKNTDLSNATFLETYKTLQLLPKLYENYACFAFKPHPLLKEKLYEHPEWGIERTNKYWKFWEEQHNTQI ENAGYIDLFKSSDAMIHDCSSFIIEYLYVNKPCLYLNPNVRNQLNAYGVIGFDAITKSYCNNDIIDFVEKVISGVADAPQ YEQNVSLIPQASPSKSVMRILNSELFKIKDNEI >Mature_432_residues TLMIRKYLKSISWLRILVIKCRRVSYYFRVKFLIRLAKLYQEREIKRIQNNTIEGKKINVVFLVLYRSIWKVDLVFKEMM KDERYNPCIVVIPRTNTVDPLSEAKETYEYFKSKGYKTKLAYQDGKWQDLELVNKIDLVFFSIPYKNTEDKYLINSLYRK VCCYVPYFEQIDKDYDVHFNGLTENLCWKIFQINKIHKDIAAKFSYNKGMNIDVVGYTATEPLYNDSIVESNPWKCKNLK KIIIAPHHSIDKNTDLSNATFLETYKTLQLLPKLYENYACFAFKPHPLLKEKLYEHPEWGIERTNKYWKFWEEQHNTQIE NAGYIDLFKSSDAMIHDCSSFIIEYLYVNKPCLYLNPNVRNQLNAYGVIGFDAITKSYCNNDIIDFVEKVISGVADAPQY EQNVSLIPQASPSKSVMRILNSELFKIKDNEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51287; Mature: 51156
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLMIRKYLKSISWLRILVIKCRRVSYYFRVKFLIRLAKLYQEREIKRIQNNTIEGKKIN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE VVFLVLYRSIWKVDLVFKEMMKDERYNPCIVVIPRTNTVDPLSEAKETYEYFKSKGYKTK HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEE LAYQDGKWQDLELVNKIDLVFFSIPYKNTEDKYLINSLYRKVCCYVPYFEQIDKDYDVHF EEECCCCCCHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCEEE NGLTENLCWKIFQINKIHKDIAAKFSYNKGMNIDVVGYTATEPLYNDSIVESNPWKCKNL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC KKIIIAPHHSIDKNTDLSNATFLETYKTLQLLPKLYENYACFAFKPHPLLKEKLYEHPEW EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCC GIERTNKYWKFWEEQHNTQIENAGYIDLFKSSDAMIHDCSSFIIEYLYVNKPCLYLNPNV CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECCCC RNQLNAYGVIGFDAITKSYCNNDIIDFVEKVISGVADAPQYEQNVSLIPQASPSKSVMRI HHCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH LNSELFKIKDNEI HHHHHEEECCCCC >Mature Secondary Structure TLMIRKYLKSISWLRILVIKCRRVSYYFRVKFLIRLAKLYQEREIKRIQNNTIEGKKIN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE VVFLVLYRSIWKVDLVFKEMMKDERYNPCIVVIPRTNTVDPLSEAKETYEYFKSKGYKTK HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEE LAYQDGKWQDLELVNKIDLVFFSIPYKNTEDKYLINSLYRKVCCYVPYFEQIDKDYDVHF EEECCCCCCHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCEEE NGLTENLCWKIFQINKIHKDIAAKFSYNKGMNIDVVGYTATEPLYNDSIVESNPWKCKNL CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCC KKIIIAPHHSIDKNTDLSNATFLETYKTLQLLPKLYENYACFAFKPHPLLKEKLYEHPEW EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCC GIERTNKYWKFWEEQHNTQIENAGYIDLFKSSDAMIHDCSSFIIEYLYVNKPCLYLNPNV CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEECCCC RNQLNAYGVIGFDAITKSYCNNDIIDFVEKVISGVADAPQYEQNVSLIPQASPSKSVMRI HHCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH LNSELFKIKDNEI HHHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA