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The map label for this gene is yvdE [H]

Identifier: 157961232

GI number: 157961232

Start: 1707098

End: 1707727

Strand: Direct

Name: yvdE [H]

Synonym: Spea_1405

Alternate gene names: 157961232

Gene position: 1707098-1707727 (Clockwise)

Preceding gene: 157961231

Following gene: 157961233

Centisome position: 32.99

GC content: 36.03

Gene sequence:

>630_bases
ATGAAACTTGTAGGCGTTACGCAGCGAGTTGATAATATTGAGCATTATTTTGAGCGAAGAGATTGTTTAGATCAAAGATG
GTCAGACTTCTTTAATCGACTAGGCTATTTAGTAATCCCACTTCCTAATATAGCTAAAGAGCGAGTTTCAAAACTTTGTG
ATAAGTTACAACTTGACGCTATTCTCTTGAGTGGAGGGAATTCTATAGCTGAATTAAACCCATCTGCAAAAGATTCGGCT
CCAGAAAGAGATGAATTTGAAAAAGAAATAGTCAACTATGCGATTCAAAACAATATTCCTCTAGTAGGTGTTTGTAGAGG
GATGCAGCTTCTTAATATTCATTTAGGTGGAAGTCTATGTGCACTTGACGGACATATTGCCACCAGACACGCTATAGAAT
CTCCAGAAAATAATCAATTATTTAATCGTATAGTGAATAGTTATCATGCTTGGGGTATTAGGCCTCAAGACTTAGCTTTG
TCTTTAAATCCATTGGCATACGACGATAAAGGAAACGTTGAGGCATTTTATTCTACATCAGAAAAGCAGCTTGGTTTGAT
GTGGCACCCTGAAAGAGAAGAACAATTTAATCAGTTCGATATTCAAATCATAAGTGAGTTTTTAAAATGA

Upstream 100 bases:

>100_bases
TGCCTGCTGCAATAGGGGTTGGTGAAAAGTTGTATGAAAAAATTACAATGATGAAGAGAGTTGAGCTTGACTGTGCTAAT
CAAACTATTAGAGAAGTAGA

Downstream 100 bases:

>100_bases
CAAAAGTACTAATTTTAGCGGCTGGGCAAGGCTCTCGGCTTCGTCCTATAACCAATGACAGACCGAAGTGTTTAGTACCT
TTACTAGGAAAGTCTTTATT

Product: peptidase C26

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKLVGVTQRVDNIEHYFERRDCLDQRWSDFFNRLGYLVIPLPNIAKERVSKLCDKLQLDAILLSGGNSIAELNPSAKDSA
PERDEFEKEIVNYAIQNNIPLVGVCRGMQLLNIHLGGSLCALDGHIATRHAIESPENNQLFNRIVNSYHAWGIRPQDLAL
SLNPLAYDDKGNVEAFYSTSEKQLGLMWHPEREEQFNQFDIQIISEFLK

Sequences:

>Translated_209_residues
MKLVGVTQRVDNIEHYFERRDCLDQRWSDFFNRLGYLVIPLPNIAKERVSKLCDKLQLDAILLSGGNSIAELNPSAKDSA
PERDEFEKEIVNYAIQNNIPLVGVCRGMQLLNIHLGGSLCALDGHIATRHAIESPENNQLFNRIVNSYHAWGIRPQDLAL
SLNPLAYDDKGNVEAFYSTSEKQLGLMWHPEREEQFNQFDIQIISEFLK
>Mature_209_residues
MKLVGVTQRVDNIEHYFERRDCLDQRWSDFFNRLGYLVIPLPNIAKERVSKLCDKLQLDAILLSGGNSIAELNPSAKDSA
PERDEFEKEIVNYAIQNNIPLVGVCRGMQLLNIHLGGSLCALDGHIATRHAIESPENNQLFNRIVNSYHAWGIRPQDLAL
SLNPLAYDDKGNVEAFYSTSEKQLGLMWHPEREEQFNQFDIQIISEFLK

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 23883; Mature: 23883

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVGVTQRVDNIEHYFERRDCLDQRWSDFFNRLGYLVIPLPNIAKERVSKLCDKLQLDA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCE
ILLSGGNSIAELNPSAKDSAPERDEFEKEIVNYAIQNNIPLVGVCRGMQLLNIHLGGSLC
EEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCEEE
ALDGHIATRHAIESPENNQLFNRIVNSYHAWGIRPQDLALSLNPLAYDDKGNVEAFYSTS
EECCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHEEEECCCEECCCCCEEEEECCC
EKQLGLMWHPEREEQFNQFDIQIISEFLK
CCCCCEEECCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKLVGVTQRVDNIEHYFERRDCLDQRWSDFFNRLGYLVIPLPNIAKERVSKLCDKLQLDA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCE
ILLSGGNSIAELNPSAKDSAPERDEFEKEIVNYAIQNNIPLVGVCRGMQLLNIHLGGSLC
EEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCEEE
ALDGHIATRHAIESPENNQLFNRIVNSYHAWGIRPQDLALSLNPLAYDDKGNVEAFYSTS
EECCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHEEEECCCEECCCCCEEEEECCC
EKQLGLMWHPEREEQFNQFDIQIISEFLK
CCCCCEEECCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]