Click here to switch to the map view.

The map label for this gene is flhF [H]

Identifier: 157961204

GI number: 157961204

Start: 1673450

End: 1674862

Strand: Direct

Name: flhF [H]

Synonym: Spea_1376

Alternate gene names: 157961204

Gene position: 1673450-1674862 (Clockwise)

Preceding gene: 157961203

Following gene: 157961205

Centisome position: 32.34

GC content: 44.66

Gene sequence:

>1413_bases
TTGAAAATTAAAAGATTTTTAGCAAAAGATATGCGATCGGCCTTAGCCCAAGTTAAAGAAACCTTGGGATCTGATGCTGT
GATCATGTCTAACAAGAAAGTGACGGGTGGCATTGAGATTGTTGCGGCTGTTGATTATGACGAGCCTAAGCCAAAGATTG
CAGAGACTAAGCCGTCGTCAGCTATGTTCACCGATCTTGCAGAAGAGAGAGTGACCTTAGGCGTGCAGTCGGGTGGTAGA
GCGCCGAATGTAAGGGCTGAAAGTCGTGCTAATCCCACGCCAGCACCCGATTCACTGCAAGCGCTACTTGAGCGTCAGCA
GAGTCGCATAAGTCAGCAAACTCAATCTAGAAGCAGTGACGAACTGGATATGCCTGAATGGGCCAAAGGACTGCAGGCGC
AGGTGAAAAAAAACGAGCCTGTTAAAGCCGAGTTTACCCCAAACCGTGCCCCAGACAGTTTCAATGGTCAGAAGCAAAAC
AACACTGCAGAAATTGACGCGATGAAACAAGAATTAGCGTCAATTCGTAATTTATTGACGCATCAAGTCAGTAGTTTGAT
GGTTGAACAGAAAAACCGTATTGACCCTGTTGGGGCAATGCTTGAGAGCAAATTGTTAGACGCAGAGTTTTCGCCTGCGA
TTGCAAAGAAGTTATCGAGCCTCAGTGAGCATTACTCTCCAGCGGAATTAGTCGCCTCTTTGCCACGAAGTTTAGCTAAT
ATGCTGGACAATCAAGGTGATGATATTGTGCGCCAAGGTGGTGTGGTGGCGTTTGTTGGGCCAACAGGAGTCGGTAAGAC
AACGACTGTGGCTAAATTGGCAGCGCGTTTTGCCGCTTATCATGGCTCAGATCAAGTTGCTCTCATTACAACGGACCATT
ATCGCATTGGAGCCTTTGAGCAATTAGCAACTTATGGCAAGATAATGGGATGCCCTGTAAAACAGGCTCATGATTTTAAT
GAGTTAGAACAAATACTCTATCAATTTAGGAACCGTAAGTTGGTCCTTATCGATACGGCAGGTATGGGGCAAAGAGATCA
ACGTTTATTCCAACAACTCGATAGTTTAGCTGCAAATAGCAGATTACCAATACGCAGTTATCTGGTAATGTCTGCAACAG
GGCAACGTCGTGTATTAGAAGATGCTGTAAAACAGTTTACGCGTATTCCACTTTCGGGTGCGGTACTAACAAAATTAGAT
GAATCAATTTCTTTAGCGCCAGCGTTAAGTGTCTTGATTCAAAGTGGGTTACCTTTAAGTTATGTAACGGACGGACAAAG
AGTTCCTGAAGATATGCAGGTGGCAGATACTCTATCTTTAGCCAATCGTGCATTAGCAGCATTAGATAACAACCCCATAG
AACCATTACATAATAGCGAAGGGTCACAAGAAGTGACCTATGCATTTGAGTGA

Upstream 100 bases:

>100_bases
AGCATACGATCCCTAATTTACGGGTGATTTCATATCAGGAAGTCCCCGACGAGAAGCAGATACGCATCGTCTCGGCAGTG
GGTCAGTAGAGGTCGAATAA

Downstream 100 bases:

>100_bases
AGCCATGACTCCGGATCAAGCAAGCGGTTTACGTATGATGAATCAGCCAAATAATGAAAAAGTAAAAGTAATCGCCGTAT
CAGGTGGTAAAGGTGGCGTT

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MKIKRFLAKDMRSALAQVKETLGSDAVIMSNKKVTGGIEIVAAVDYDEPKPKIAETKPSSAMFTDLAEERVTLGVQSGGR
APNVRAESRANPTPAPDSLQALLERQQSRISQQTQSRSSDELDMPEWAKGLQAQVKKNEPVKAEFTPNRAPDSFNGQKQN
NTAEIDAMKQELASIRNLLTHQVSSLMVEQKNRIDPVGAMLESKLLDAEFSPAIAKKLSSLSEHYSPAELVASLPRSLAN
MLDNQGDDIVRQGGVVAFVGPTGVGKTTTVAKLAARFAAYHGSDQVALITTDHYRIGAFEQLATYGKIMGCPVKQAHDFN
ELEQILYQFRNRKLVLIDTAGMGQRDQRLFQQLDSLAANSRLPIRSYLVMSATGQRRVLEDAVKQFTRIPLSGAVLTKLD
ESISLAPALSVLIQSGLPLSYVTDGQRVPEDMQVADTLSLANRALAALDNNPIEPLHNSEGSQEVTYAFE

Sequences:

>Translated_470_residues
MKIKRFLAKDMRSALAQVKETLGSDAVIMSNKKVTGGIEIVAAVDYDEPKPKIAETKPSSAMFTDLAEERVTLGVQSGGR
APNVRAESRANPTPAPDSLQALLERQQSRISQQTQSRSSDELDMPEWAKGLQAQVKKNEPVKAEFTPNRAPDSFNGQKQN
NTAEIDAMKQELASIRNLLTHQVSSLMVEQKNRIDPVGAMLESKLLDAEFSPAIAKKLSSLSEHYSPAELVASLPRSLAN
MLDNQGDDIVRQGGVVAFVGPTGVGKTTTVAKLAARFAAYHGSDQVALITTDHYRIGAFEQLATYGKIMGCPVKQAHDFN
ELEQILYQFRNRKLVLIDTAGMGQRDQRLFQQLDSLAANSRLPIRSYLVMSATGQRRVLEDAVKQFTRIPLSGAVLTKLD
ESISLAPALSVLIQSGLPLSYVTDGQRVPEDMQVADTLSLANRALAALDNNPIEPLHNSEGSQEVTYAFE
>Mature_470_residues
MKIKRFLAKDMRSALAQVKETLGSDAVIMSNKKVTGGIEIVAAVDYDEPKPKIAETKPSSAMFTDLAEERVTLGVQSGGR
APNVRAESRANPTPAPDSLQALLERQQSRISQQTQSRSSDELDMPEWAKGLQAQVKKNEPVKAEFTPNRAPDSFNGQKQN
NTAEIDAMKQELASIRNLLTHQVSSLMVEQKNRIDPVGAMLESKLLDAEFSPAIAKKLSSLSEHYSPAELVASLPRSLAN
MLDNQGDDIVRQGGVVAFVGPTGVGKTTTVAKLAARFAAYHGSDQVALITTDHYRIGAFEQLATYGKIMGCPVKQAHDFN
ELEQILYQFRNRKLVLIDTAGMGQRDQRLFQQLDSLAANSRLPIRSYLVMSATGQRRVLEDAVKQFTRIPLSGAVLTKLD
ESISLAPALSVLIQSGLPLSYVTDGQRVPEDMQVADTLSLANRALAALDNNPIEPLHNSEGSQEVTYAFE

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1789874, Length=192, Percent_Identity=32.2916666666667, Blast_Score=76, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6325345, Length=192, Percent_Identity=28.125, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 51314; Mature: 51314

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKRFLAKDMRSALAQVKETLGSDAVIMSNKKVTGGIEIVAAVDYDEPKPKIAETKPSS
CCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEECCCEEEEEEECCCCCCCCCCCCCCCH
AMFTDLAEERVTLGVQSGGRAPNVRAESRANPTPAPDSLQALLERQQSRISQQTQSRSSD
HHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
ELDMPEWAKGLQAQVKKNEPVKAEFTPNRAPDSFNGQKQNNTAEIDAMKQELASIRNLLT
CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
HQVSSLMVEQKNRIDPVGAMLESKLLDAEFSPAIAKKLSSLSEHYSPAELVASLPRSLAN
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
MLDNQGDDIVRQGGVVAFVGPTGVGKTTTVAKLAARFAAYHGSDQVALITTDHYRIGAFE
HHCCCCCHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHH
QLATYGKIMGCPVKQAHDFNELEQILYQFRNRKLVLIDTAGMGQRDQRLFQQLDSLAANS
HHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
RLPIRSYLVMSATGQRRVLEDAVKQFTRIPLSGAVLTKLDESISLAPALSVLIQSGLPLS
CCCHHHHHEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
YVTDGQRVPEDMQVADTLSLANRALAALDNNPIEPLHNSEGSQEVTYAFE
EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MKIKRFLAKDMRSALAQVKETLGSDAVIMSNKKVTGGIEIVAAVDYDEPKPKIAETKPSS
CCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEECCCEEEEEEECCCCCCCCCCCCCCCH
AMFTDLAEERVTLGVQSGGRAPNVRAESRANPTPAPDSLQALLERQQSRISQQTQSRSSD
HHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
ELDMPEWAKGLQAQVKKNEPVKAEFTPNRAPDSFNGQKQNNTAEIDAMKQELASIRNLLT
CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
HQVSSLMVEQKNRIDPVGAMLESKLLDAEFSPAIAKKLSSLSEHYSPAELVASLPRSLAN
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
MLDNQGDDIVRQGGVVAFVGPTGVGKTTTVAKLAARFAAYHGSDQVALITTDHYRIGAFE
HHCCCCCHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHH
QLATYGKIMGCPVKQAHDFNELEQILYQFRNRKLVLIDTAGMGQRDQRLFQQLDSLAANS
HHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
RLPIRSYLVMSATGQRRVLEDAVKQFTRIPLSGAVLTKLDESISLAPALSVLIQSGLPLS
CCCHHHHHEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
YVTDGQRVPEDMQVADTLSLANRALAALDNNPIEPLHNSEGSQEVTYAFE
EECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]