| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is fliH [H]
Identifier: 157961191
GI number: 157961191
Start: 1660927
End: 1661877
Strand: Direct
Name: fliH [H]
Synonym: Spea_1363
Alternate gene names: 157961191
Gene position: 1660927-1661877 (Clockwise)
Preceding gene: 157961190
Following gene: 157961192
Centisome position: 32.1
GC content: 49.0
Gene sequence:
>951_bases ATGACTGACCCTAAAAAGCCTCAAGGCGCCAGCATCAACACTAGCGATGAGTTTGAACATTGGGAACTGCCGGAGATCCA TAAAGCGAAGGCTCCCTCTTCATTGAATATGTTCGGTCGTCACAGCTTACAATTGCAGGCCGAGGAACAAACCGAGGTCG AGTCTATACTGCCGCCGACCTTGAGCGAGATTGAAGATATTCGCGCTCATGCAGAGCAAGAGGGTTTTGGCGAAGGGCTA GAGAAAGGTCATAGTGAAGGCTTAGAGAAAGGCCGTTTAGAGGGACTTGAGCAAGGGCACAGTGAGGGCTTTAGCCAAGG TCAGCAGCAAGGGTACCTAGAGGGACTACAAGCGGCATCTGAGATGCTGCAGCGTTTCGAAAGTCTTTTGAGCCAGTTTG AAGCCCCCTTATCCATTCTAGATACCGAAATCGAGAAAGAATTGCTCAATACCTCAATGGTGTTGGCAAAGGCTGTTATT GGCCATGAGCTAAAAACTTATCCCGAGCATATTTTAGCGGCGCTGCGTCAGGGCGTTGACTCCTTGCCGATAAAAGATCA GAAGATTAATGTTCGGGTCACGCCCAGTGATGAGATACTGATTTCAGAGCTCTACTCTCAAGCTCAGCTAGAGCGAAATC GCTGGGAAATTGAAGCCGATCCAAGCTTAACTGCGGGAGATTGCATCATTGACTGTGGCCGCAGCCATATTGATATGACT GTCGAGACCCGCATTCAGAGCGTCTTTCTAGATTTAGATAAGCACCAGCAAGATCTGTTGCAGTTAAAAGAGCAGCAAGA AGATGCGCTGCTTACACAAAGACAGGCCAAAGCCCAACAGCATGCTGCGACGTTAGAGCCAACAGATGACGCAGTAGATA ATCAACTAGCCACAGCTTGTTTAAATGCCAACGAAGGTGAGCATGCCGACCCGTCAGCACCAACTGCGTAA
Upstream 100 bases:
>100_bases AAGTTGAAGTCGCTCAGAAAGAGATCTTATCTATTGCTCGTCGTTTGAGCGACAGTGGAGAGATCATGCTTGGCGGTGGA GGCGGTGAAGAGTTTCTATA
Downstream 100 bases:
>100_bases TAAGCTGGCTCAACACCAGCAAAAAGTACATCCATTCCTAGTTGAGGCAAGTGGTCAACTGGTGCGAGTGGTGGGCTTGA CCTTAGAAGCGACAGGCTGC
Product: flagellar assembly protein FliH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTDPKKPQGASINTSDEFEHWELPEIHKAKAPSSLNMFGRHSLQLQAEEQTEVESILPPTLSEIEDIRAHAEQEGFGEGL EKGHSEGLEKGRLEGLEQGHSEGFSQGQQQGYLEGLQAASEMLQRFESLLSQFEAPLSILDTEIEKELLNTSMVLAKAVI GHELKTYPEHILAALRQGVDSLPIKDQKINVRVTPSDEILISELYSQAQLERNRWEIEADPSLTAGDCIIDCGRSHIDMT VETRIQSVFLDLDKHQQDLLQLKEQQEDALLTQRQAKAQQHAATLEPTDDAVDNQLATACLNANEGEHADPSAPTA
Sequences:
>Translated_316_residues MTDPKKPQGASINTSDEFEHWELPEIHKAKAPSSLNMFGRHSLQLQAEEQTEVESILPPTLSEIEDIRAHAEQEGFGEGL EKGHSEGLEKGRLEGLEQGHSEGFSQGQQQGYLEGLQAASEMLQRFESLLSQFEAPLSILDTEIEKELLNTSMVLAKAVI GHELKTYPEHILAALRQGVDSLPIKDQKINVRVTPSDEILISELYSQAQLERNRWEIEADPSLTAGDCIIDCGRSHIDMT VETRIQSVFLDLDKHQQDLLQLKEQQEDALLTQRQAKAQQHAATLEPTDDAVDNQLATACLNANEGEHADPSAPTA >Mature_315_residues TDPKKPQGASINTSDEFEHWELPEIHKAKAPSSLNMFGRHSLQLQAEEQTEVESILPPTLSEIEDIRAHAEQEGFGEGLE KGHSEGLEKGRLEGLEQGHSEGFSQGQQQGYLEGLQAASEMLQRFESLLSQFEAPLSILDTEIEKELLNTSMVLAKAVIG HELKTYPEHILAALRQGVDSLPIKDQKINVRVTPSDEILISELYSQAQLERNRWEIEADPSLTAGDCIIDCGRSHIDMTV ETRIQSVFLDLDKHQQDLLQLKEQQEDALLTQRQAKAQQHAATLEPTDDAVDNQLATACLNANEGEHADPSAPTA
Specific function: Needed for flagellar regrowth and assembly [H]
COG id: COG1317
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliH family [H]
Homologues:
Organism=Escherichia coli, GI87082004, Length=168, Percent_Identity=28.5714285714286, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000563 - InterPro: IPR018035 [H]
Pfam domain/function: PF02108 FliH [H]
EC number: NA
Molecular weight: Translated: 35040; Mature: 34909
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPKKPQGASINTSDEFEHWELPEIHKAKAPSSLNMFGRHSLQLQAEEQTEVESILPPT CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCCCCEEEECHHHHHHHHHCCCH LSEIEDIRAHAEQEGFGEGLEKGHSEGLEKGRLEGLEQGHSEGFSQGQQQGYLEGLQAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMLQRFESLLSQFEAPLSILDTEIEKELLNTSMVLAKAVIGHELKTYPEHILAALRQGVD HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SLPIKDQKINVRVTPSDEILISELYSQAQLERNRWEIEADPSLTAGDCIIDCGRSHIDMT CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHCCCCCCCHH VETRIQSVFLDLDKHQQDLLQLKEQQEDALLTQRQAKAQQHAATLEPTDDAVDNQLATAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LNANEGEHADPSAPTA HCCCCCCCCCCCCCCC >Mature Secondary Structure TDPKKPQGASINTSDEFEHWELPEIHKAKAPSSLNMFGRHSLQLQAEEQTEVESILPPT CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCCCCEEEECHHHHHHHHHCCCH LSEIEDIRAHAEQEGFGEGLEKGHSEGLEKGRLEGLEQGHSEGFSQGQQQGYLEGLQAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EMLQRFESLLSQFEAPLSILDTEIEKELLNTSMVLAKAVIGHELKTYPEHILAALRQGVD HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SLPIKDQKINVRVTPSDEILISELYSQAQLERNRWEIEADPSLTAGDCIIDCGRSHIDMT CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHCCCCCCCHH VETRIQSVFLDLDKHQQDLLQLKEQQEDALLTQRQAKAQQHAATLEPTDDAVDNQLATAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LNANEGEHADPSAPTA HCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 8224881 [H]