Click here to switch to the map view.

The map label for this gene is fliD [H]

Identifier: 157961182

GI number: 157961182

Start: 1650241

End: 1651602

Strand: Direct

Name: fliD [H]

Synonym: Spea_1354

Alternate gene names: 157961182

Gene position: 1650241-1651602 (Clockwise)

Preceding gene: 157961181

Following gene: 157961183

Centisome position: 31.89

GC content: 44.79

Gene sequence:

>1362_bases
ATGGGATTAACATCGGTTGGTATTGGTTCTGGAATGGATATCAATGGCATTGTGTCGGCGCTAGTGGGAGCCGAAAACGA
TCCAAAGGTTGCCAAGTTTGATGCTGATGAAGGCAAGATTAACGCGCAGATATCGGGTATTGGCTCACTAAAGAGTGCAT
TGACTGAATTTCAAGACAGTTTAGAGAAGTTAACCGACCCAGATACTTTTATTGCACGTAAGGTCGAGCTGTCTAATAAA
GACTTTATTAGTGCGACCGCAGACGAAACCGCTGTTTCCGGTAGTTATAAAATTGAAGTTGAGCAGTTAGCCGAAAGTCA
AAAGATTGGCTCTGCTGCCGTGGCTGATGCTACAGCGGCATTAGGAGAGGGGTCGTTAACTTTTGGTGTTGATGGCAAAG
ACTTTACCGTTGCTGTTGAAGCGGGGGATTCACTTGAAACAGTGATGAAAAAAATCAACGATGCGGAAGATAACGTTGGT
GTGACAGCAACCATCATTAACGGTGATAATGGCCCTCAACTGGTAATGACGTCAGATAAAACGGGTACTGCTAATAACAT
TACCGTTGCCGCAACCGACACCGATGGTGGTACAGGCTTAGCAAAGACCTTTACTATGACCGAACTTAGCGCGGCAAAAG
ATGCGGTGTTGTATGTAGATGGCTTGAAGGTGACATCAGCTAGCAATGAAGTCGAGAACGTGATTACCGGGGTTAGTTTA
ACCCTCAAAGATGAAGATTTATCTAAAAGCACTACGCTAACGATCTCACCCGATACGGATTCTGTAAAGAAGAGCGTGGA
GGGTTTTGTTGAGGCTTACAATGCCTTGATGGGAACAGTGTCTGATCTGTCTAGTTATGATGCTGAAACAGAGCAAGCTG
GAATTTTGCAAGGCGACTCGATGATCCGCAGTCTTCAGAGCCAGTTGCGTGGTGTGTTATCCAGTAGTTTTGATACCTCA
GAAGGTACGACCATGCTGGCTAATATAGGCATAAAGACCACTCAGCAAGGTACACTTGAGATTGATGAGGATATTTTAGA
TAAAGCGCTAAACTCTGATATGTCGCAAATTCGAGAAATGTTTAGCGCAGAAGATACAGGTTTAGCGGCGAGATTAGACG
GATTGGCCGAAACCTACGTACAATCTGGGGGCACGTTAGATAGTCGTGATGAAACTTTAGATAACCAGATATCACGACTC
ACTGATAGCCGAGAGCTATTCGCTCGGAAAATGGCTGCATACGAAACTCGACTGTTTAATCAGTTTAATGCCATGGACTT
GATGGTCGCTAGTCTGAATCAGCAATCTAGCGATTTGTTCAATCGTCTCGATTCTCTGCCAGGTATGGTGCCGCAAAATT
AG

Upstream 100 bases:

>100_bases
GTATAACTGGGCGCTTTGTAATAAATTAACTATTACAGACTCTATTTCTAGTTTATGAAGTATTAGATTGATATTTGGCT
AATCACTTAATGAGGTTTTT

Downstream 100 bases:

>100_bases
TTACTTTGACTTACTTATTTTATAGCCTTGCTTTGACTGTTTTTGTCACTGCAGGCTTTTGCTTGATAACATCAGAATGA
GTAAAAGGCGTTAGTAATGG

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MGLTSVGIGSGMDINGIVSALVGAENDPKVAKFDADEGKINAQISGIGSLKSALTEFQDSLEKLTDPDTFIARKVELSNK
DFISATADETAVSGSYKIEVEQLAESQKIGSAAVADATAALGEGSLTFGVDGKDFTVAVEAGDSLETVMKKINDAEDNVG
VTATIINGDNGPQLVMTSDKTGTANNITVAATDTDGGTGLAKTFTMTELSAAKDAVLYVDGLKVTSASNEVENVITGVSL
TLKDEDLSKSTTLTISPDTDSVKKSVEGFVEAYNALMGTVSDLSSYDAETEQAGILQGDSMIRSLQSQLRGVLSSSFDTS
EGTTMLANIGIKTTQQGTLEIDEDILDKALNSDMSQIREMFSAEDTGLAARLDGLAETYVQSGGTLDSRDETLDNQISRL
TDSRELFARKMAAYETRLFNQFNAMDLMVASLNQQSSDLFNRLDSLPGMVPQN

Sequences:

>Translated_453_residues
MGLTSVGIGSGMDINGIVSALVGAENDPKVAKFDADEGKINAQISGIGSLKSALTEFQDSLEKLTDPDTFIARKVELSNK
DFISATADETAVSGSYKIEVEQLAESQKIGSAAVADATAALGEGSLTFGVDGKDFTVAVEAGDSLETVMKKINDAEDNVG
VTATIINGDNGPQLVMTSDKTGTANNITVAATDTDGGTGLAKTFTMTELSAAKDAVLYVDGLKVTSASNEVENVITGVSL
TLKDEDLSKSTTLTISPDTDSVKKSVEGFVEAYNALMGTVSDLSSYDAETEQAGILQGDSMIRSLQSQLRGVLSSSFDTS
EGTTMLANIGIKTTQQGTLEIDEDILDKALNSDMSQIREMFSAEDTGLAARLDGLAETYVQSGGTLDSRDETLDNQISRL
TDSRELFARKMAAYETRLFNQFNAMDLMVASLNQQSSDLFNRLDSLPGMVPQN
>Mature_452_residues
GLTSVGIGSGMDINGIVSALVGAENDPKVAKFDADEGKINAQISGIGSLKSALTEFQDSLEKLTDPDTFIARKVELSNKD
FISATADETAVSGSYKIEVEQLAESQKIGSAAVADATAALGEGSLTFGVDGKDFTVAVEAGDSLETVMKKINDAEDNVGV
TATIINGDNGPQLVMTSDKTGTANNITVAATDTDGGTGLAKTFTMTELSAAKDAVLYVDGLKVTSASNEVENVITGVSLT
LKDEDLSKSTTLTISPDTDSVKKSVEGFVEAYNALMGTVSDLSSYDAETEQAGILQGDSMIRSLQSQLRGVLSSSFDTSE
GTTMLANIGIKTTQQGTLEIDEDILDKALNSDMSQIREMFSAEDTGLAARLDGLAETYVQSGGTLDSRDETLDNQISRLT
DSRELFARKMAAYETRLFNQFNAMDLMVASLNQQSSDLFNRLDSLPGMVPQN

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=465, Percent_Identity=29.6774193548387, Blast_Score=143, Evalue=2e-35,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 47757; Mature: 47626

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLTSVGIGSGMDINGIVSALVGAENDPKVAKFDADEGKINAQISGIGSLKSALTEFQDS
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHH
LEKLTDPDTFIARKVELSNKDFISATADETAVSGSYKIEVEQLAESQKIGSAAVADATAA
HHHHCCCCHHHEEEEECCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHH
LGEGSLTFGVDGKDFTVAVEAGDSLETVMKKINDAEDNVGVTATIINGDNGPQLVMTSDK
CCCCCEEEECCCCCEEEEEECCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCC
TGTANNITVAATDTDGGTGLAKTFTMTELSAAKDAVLYVDGLKVTSASNEVENVITGVSL
CCCCCCEEEEEECCCCCCCHHHEEEHHHHHCCCCEEEEEECEEEECCCHHHHHHHHCCEE
TLKDEDLSKSTTLTISPDTDSVKKSVEGFVEAYNALMGTVSDLSSYDAETEQAGILQGDS
EEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHH
MIRSLQSQLRGVLSSSFDTSEGTTMLANIGIKTTQQGTLEIDEDILDKALNSDMSQIREM
HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEECCCCCEEECHHHHHHHHCHHHHHHHHH
FSAEDTGLAARLDGLAETYVQSGGTLDSRDETLDNQISRLTDSRELFARKMAAYETRLFN
HCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QFNAMDLMVASLNQQSSDLFNRLDSLPGMVPQN
HHCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GLTSVGIGSGMDINGIVSALVGAENDPKVAKFDADEGKINAQISGIGSLKSALTEFQDS
CCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHH
LEKLTDPDTFIARKVELSNKDFISATADETAVSGSYKIEVEQLAESQKIGSAAVADATAA
HHHHCCCCHHHEEEEECCCCCCEEECCCCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHH
LGEGSLTFGVDGKDFTVAVEAGDSLETVMKKINDAEDNVGVTATIINGDNGPQLVMTSDK
CCCCCEEEECCCCCEEEEEECCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCC
TGTANNITVAATDTDGGTGLAKTFTMTELSAAKDAVLYVDGLKVTSASNEVENVITGVSL
CCCCCCEEEEEECCCCCCCHHHEEEHHHHHCCCCEEEEEECEEEECCCHHHHHHHHCCEE
TLKDEDLSKSTTLTISPDTDSVKKSVEGFVEAYNALMGTVSDLSSYDAETEQAGILQGDS
EEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHH
MIRSLQSQLRGVLSSSFDTSEGTTMLANIGIKTTQQGTLEIDEDILDKALNSDMSQIREM
HHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEECCCCCEEECHHHHHHHHCHHHHHHHHH
FSAEDTGLAARLDGLAETYVQSGGTLDSRDETLDNQISRLTDSRELFARKMAAYETRLFN
HCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
QFNAMDLMVASLNQQSSDLFNRLDSLPGMVPQN
HHCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9488388; 10678962 [H]