| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is gltP [H]
Identifier: 157961158
GI number: 157961158
Start: 1624590
End: 1625843
Strand: Direct
Name: gltP [H]
Synonym: Spea_1330
Alternate gene names: 157961158
Gene position: 1624590-1625843 (Clockwise)
Preceding gene: 157961157
Following gene: 157961161
Centisome position: 31.4
GC content: 49.36
Gene sequence:
>1254_bases ATGTGGAATAAAATTCGCAGTTCTTTGCCACTGCAGCTCATCATAGCTGCGGGCGCAGCTTGGCTATTTGCAACCTCGCT AACCTCTCTTGCTCAGCCTAACGTGATAGCCGACGTTGATCAGCAAGCTTGGTATCAATTTCTAATGCTAGGCAAAACCG TCTATATCGGTTTACTCAAGATGGTCGTCGGCATAATGGTGATGCTGTCGCTTATCGAGGGGATCAGCAACATAGGCGCG ATAACCAAATTAAAAACATTGGGTATGCGTACGCTTGGCTTTTACACCTTCACTACCACGATAGCGGTATCTCTTGGTTT GGGAGCATCTTTACTCTTGCCAGTTTGGCAACCATTAACTCAAGCCGTTCCTTTAGCCGAAGGGGCTACGCTTATTGGTG AGCAGGCAGCATCGGGCGGCGCTATCGCCACTAAGCTATTGAATATGGCGCTAGTAAACCCGGTTGCCGCTATTGTTAAT GGCAACCTGCTCGCTGTGGTGGTGTTTTCAATTATGTTTGGAATCGCACTGTTAACCGCGTTACCTGAAAAGCACCTGCT GTTTGAGGTGATCGCTGGTCTTAACAAGGGCATTAACGCCATGATTGGCGGCATTATTCGCCTCTCCCCCTTGGCTATCT TTGCCATCGTATTCGAGTTTTCCCTCACGGGAGCTGAGGCGCTATTTAGTCAATTAGCCCTATTTGCACTATTGGTCTTT GTGTTAACAGTGATCCATGGGCTGGTGGTACTGCCAGGTCTGGCTAAGTTGTTTACTGGGATTAAAATAACCACCTTATT TAAAGGTATTAGCGCGCCGTTAGCGATGGCCTTTGCTACCTCATCGAGCGCCGCGACTCTACCCTTATCGATGCGAAGCG CCGAGGAGCTTGGGGTTTCCCCCGCGACCAGCAGCATGGTTTTACCGCTAGGTTCGGTGATGAATATGGATGGTACTGCA CTATTTGAAGGGGTCGCCGCTATATTTTTGGCTCAACTGTTTGGCGTGGATCTGACTACAACAGGCATGGTGATGATTTT TATCATGGCCATGGTGTCTTCAATCGGCGCACCGGGCATGCCATCAGGATCTATGTCGGGCATGCAATTAGTGCTGTTAG CTGCAGGGATCCCCCTAGAAGCTATCGCAATCTTGCTGATAATCGAGAGGCCACTTGATACCTTCCGCACCGCAGTGAAT GTTGAGGGCGATATCATCGCCGCGCTAGTGGTAGATAAATGGCAGAAAGGCTAA
Upstream 100 bases:
>100_bases TTAGGTGCGCAATCGCTTGAACCGCGATTGACTACCTATTCGTCGCTATAGAGCATTAGTTCATAGCTCGCTAACCCATT AAGTCAATTTGGAATGCCCT
Downstream 100 bases:
>100_bases GAGGTTGCTGATGTGGGCGCTAGAATGGCAGCGCGTATGAATGCCTGTGTAAGTAACGGACTGTGTAAGTAACGGACTGT GTAAAAAATAGAAAGCTACA
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MWNKIRSSLPLQLIIAAGAAWLFATSLTSLAQPNVIADVDQQAWYQFLMLGKTVYIGLLKMVVGIMVMLSLIEGISNIGA ITKLKTLGMRTLGFYTFTTTIAVSLGLGASLLLPVWQPLTQAVPLAEGATLIGEQAASGGAIATKLLNMALVNPVAAIVN GNLLAVVVFSIMFGIALLTALPEKHLLFEVIAGLNKGINAMIGGIIRLSPLAIFAIVFEFSLTGAEALFSQLALFALLVF VLTVIHGLVVLPGLAKLFTGIKITTLFKGISAPLAMAFATSSSAATLPLSMRSAEELGVSPATSSMVLPLGSVMNMDGTA LFEGVAAIFLAQLFGVDLTTTGMVMIFIMAMVSSIGAPGMPSGSMSGMQLVLLAAGIPLEAIAILLIIERPLDTFRTAVN VEGDIIAALVVDKWQKG
Sequences:
>Translated_417_residues MWNKIRSSLPLQLIIAAGAAWLFATSLTSLAQPNVIADVDQQAWYQFLMLGKTVYIGLLKMVVGIMVMLSLIEGISNIGA ITKLKTLGMRTLGFYTFTTTIAVSLGLGASLLLPVWQPLTQAVPLAEGATLIGEQAASGGAIATKLLNMALVNPVAAIVN GNLLAVVVFSIMFGIALLTALPEKHLLFEVIAGLNKGINAMIGGIIRLSPLAIFAIVFEFSLTGAEALFSQLALFALLVF VLTVIHGLVVLPGLAKLFTGIKITTLFKGISAPLAMAFATSSSAATLPLSMRSAEELGVSPATSSMVLPLGSVMNMDGTA LFEGVAAIFLAQLFGVDLTTTGMVMIFIMAMVSSIGAPGMPSGSMSGMQLVLLAAGIPLEAIAILLIIERPLDTFRTAVN VEGDIIAALVVDKWQKG >Mature_417_residues MWNKIRSSLPLQLIIAAGAAWLFATSLTSLAQPNVIADVDQQAWYQFLMLGKTVYIGLLKMVVGIMVMLSLIEGISNIGA ITKLKTLGMRTLGFYTFTTTIAVSLGLGASLLLPVWQPLTQAVPLAEGATLIGEQAASGGAIATKLLNMALVNPVAAIVN GNLLAVVVFSIMFGIALLTALPEKHLLFEVIAGLNKGINAMIGGIIRLSPLAIFAIVFEFSLTGAEALFSQLALFALLVF VLTVIHGLVVLPGLAKLFTGIKITTLFKGISAPLAMAFATSSSAATLPLSMRSAEELGVSPATSSMVLPLGSVMNMDGTA LFEGVAAIFLAQLFGVDLTTTGMVMIFIMAMVSSIGAPGMPSGSMSGMQLVLLAAGIPLEAIAILLIIERPLDTFRTAVN VEGDIIAALVVDKWQKG
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI223468566, Length=261, Percent_Identity=38.6973180076628, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI5032093, Length=267, Percent_Identity=37.8277153558052, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI223468564, Length=252, Percent_Identity=38.4920634920635, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI4827012, Length=276, Percent_Identity=34.7826086956522, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI169790839, Length=310, Percent_Identity=32.5806451612903, Blast_Score=135, Evalue=5e-32, Organism=Homo sapiens, GI21314632, Length=287, Percent_Identity=32.404181184669, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI66773030, Length=257, Percent_Identity=34.2412451361868, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI40254478, Length=258, Percent_Identity=35.6589147286822, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI194239697, Length=253, Percent_Identity=34.3873517786561, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI262359914, Length=233, Percent_Identity=33.4763948497854, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI301601644, Length=127, Percent_Identity=40.1574803149606, Blast_Score=94, Evalue=3e-19, Organism=Escherichia coli, GI1790514, Length=414, Percent_Identity=31.6425120772947, Blast_Score=165, Evalue=5e-42, Organism=Escherichia coli, GI1789947, Length=369, Percent_Identity=27.3712737127371, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1788024, Length=404, Percent_Identity=23.5148514851485, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1789473, Length=267, Percent_Identity=26.9662921348315, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17537407, Length=381, Percent_Identity=30.1837270341207, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI71983106, Length=404, Percent_Identity=29.9504950495049, Blast_Score=142, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71983099, Length=404, Percent_Identity=29.9504950495049, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71996953, Length=313, Percent_Identity=33.5463258785943, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI193206505, Length=255, Percent_Identity=33.7254901960784, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI193206654, Length=257, Percent_Identity=32.295719844358, Blast_Score=117, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17541374, Length=262, Percent_Identity=33.206106870229, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24583025, Length=258, Percent_Identity=29.4573643410853, Blast_Score=115, Evalue=8e-26, Organism=Drosophila melanogaster, GI17137668, Length=258, Percent_Identity=29.4573643410853, Blast_Score=115, Evalue=8e-26, Organism=Drosophila melanogaster, GI24583023, Length=258, Percent_Identity=29.4573643410853, Blast_Score=115, Evalue=8e-26, Organism=Drosophila melanogaster, GI281360481, Length=272, Percent_Identity=27.9411764705882, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI281360483, Length=272, Percent_Identity=27.9411764705882, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI17137666, Length=272, Percent_Identity=27.9411764705882, Blast_Score=72, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43505; Mature: 43505
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWNKIRSSLPLQLIIAAGAAWLFATSLTSLAQPNVIADVDQQAWYQFLMLGKTVYIGLLK CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHH MVVGIMVMLSLIEGISNIGAITKLKTLGMRTLGFYTFTTTIAVSLGLGASLLLPVWQPLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QAVPLAEGATLIGEQAASGGAIATKLLNMALVNPVAAIVNGNLLAVVVFSIMFGIALLTA HHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LPEKHLLFEVIAGLNKGINAMIGGIIRLSPLAIFAIVFEFSLTGAEALFSQLALFALLVF CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VLTVIHGLVVLPGLAKLFTGIKITTLFKGISAPLAMAFATSSSAATLPLSMRSAEELGVS HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCC PATSSMVLPLGSVMNMDGTALFEGVAAIFLAQLFGVDLTTTGMVMIFIMAMVSSIGAPGM CCCCCHHCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC PSGSMSGMQLVLLAAGIPLEAIAILLIIERPLDTFRTAVNVEGDIIAALVVDKWQKG CCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MWNKIRSSLPLQLIIAAGAAWLFATSLTSLAQPNVIADVDQQAWYQFLMLGKTVYIGLLK CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHH MVVGIMVMLSLIEGISNIGAITKLKTLGMRTLGFYTFTTTIAVSLGLGASLLLPVWQPLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QAVPLAEGATLIGEQAASGGAIATKLLNMALVNPVAAIVNGNLLAVVVFSIMFGIALLTA HHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LPEKHLLFEVIAGLNKGINAMIGGIIRLSPLAIFAIVFEFSLTGAEALFSQLALFALLVF CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VLTVIHGLVVLPGLAKLFTGIKITTLFKGISAPLAMAFATSSSAATLPLSMRSAEELGVS HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCC PATSSMVLPLGSVMNMDGTALFEGVAAIFLAQLFGVDLTTTGMVMIFIMAMVSSIGAPGM CCCCCHHCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC PSGSMSGMQLVLLAAGIPLEAIAILLIIERPLDTFRTAVNVEGDIIAALVVDKWQKG CCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]