| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is ybgT [C]
Identifier: 157961148
GI number: 157961148
Start: 1613052
End: 1613168
Strand: Direct
Name: ybgT [C]
Synonym: Spea_1320
Alternate gene names: 157961148
Gene position: 1613052-1613168 (Clockwise)
Preceding gene: 157961147
Following gene: 157961151
Centisome position: 31.17
GC content: 42.74
Gene sequence:
>117_bases ATGTGGTATTTCGCTTGGATTTTAGGCGTATTGTTAGCCTGTTCTTTTGGTATTATCAACGCCCTATGGCTTGAGACGAC TGAGAACATGGACCGTGATGCAGAGACTGAAGATTAA
Upstream 100 bases:
>100_bases TAGCTATACTGTTTGGACTTACTTGAAGATGTTTGGTCGCTTATCTCGCGATTTCATCCAAAAGAACAAGACCTCACTTT ACTAATAAGGAGCCTAGATT
Downstream 100 bases:
>100_bases TCTTTAATCCGCTAAATGGTTAAGTAAGAGCCCCGCAAATGCGGGGCTTTTTGTTTTTGAAGAAGGTAAACGCAGGTCCT AGGTCCTAGGAGCTAGGAAA
Product: cyd operon protein YbgT
Products: NA
Alternate protein names: Cyd Operon
Number of amino acids: Translated: 38; Mature: 38
Protein sequence:
>38_residues MWYFAWILGVLLACSFGIINALWLETTENMDRDAETED
Sequences:
>Translated_38_residues MWYFAWILGVLLACSFGIINALWLETTENMDRDAETED >Mature_38_residues MWYFAWILGVLLACSFGIINALWLETTENMDRDAETED
Specific function: Unknown
COG id: COG4890
COG function: function code S; Predicted outer membrane lipoprotein
Gene ontology:
Cell location: Transmembrane, Inner membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4439; Mature: 4439
Theoretical pI: Translated: 3.47; Mature: 3.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWYFAWILGVLLACSFGIINALWLETTENMDRDAETED CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MWYFAWILGVLLACSFGIINALWLETTENMDRDAETED CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA