| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961122
Identifier: 157961122
GI number: 157961122
Start: 1578876
End: 1579319
Strand: Reverse
Name: 157961122
Synonym: Spea_1294
Alternate gene names: NA
Gene position: 1579319-1578876 (Counterclockwise)
Preceding gene: 157961123
Following gene: 157961121
Centisome position: 30.52
GC content: 40.09
Gene sequence:
>444_bases ATGGGTCTGGCAGATCTCAAGAAAAACTCTACGCCGTCTAGTTCAACCCATAGGCAGATCCAAACAAGCCAGCTAGCACT CGATGATTTAATTGATGATTTTATTAACGATGCGAGCCGTTATGCTTCAGGCCAAGAAGTGCTCGCGTCTAAACAACATA AAGTCATTGATTTAGAACGACAGAAAGCCCGGTTTCAGCCTGAATATAGAAGTAACTTACTGAACAGACAACAAAGCGAA ACAGTATTAACGGTGAAAAAAGGAAATTGCCCTGTCAGAAAGGCAACCTTCACCTTAACTGAATCTGCGATTGCTCACTT AGCAACATTAGCCGATGACTGCGATGTAGCAAAATCAAAGTTAATTCGCTTCTTAATTGAGCATCACTTTAATTTAAGCC CCGAGCAAAGAAAGCAAAAGGAAAAAAGTATTATCGTTGAATAA
Upstream 100 bases:
>100_bases GAGATAAGGGGCATTGCCTGTGAAATGCTACAAGTAAACAGTGCCACTGAAATTCGCAATCGCCTTGCTGAAAAACAGAT GAACAAGATGAGAGGTAATT
Downstream 100 bases:
>100_bases GTATAAATCTCCCTTCCCTTAGCTGGCAGTAAACTAACAATTTTGAAGTATTGCACTGCCAGCATTTTTTCTCTATCCGC GACGCTCCCCAAACTGCCCA
Product: CopG family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator CopG Family Protein
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MGLADLKKNSTPSSSTHRQIQTSQLALDDLIDDFINDASRYASGQEVLASKQHKVIDLERQKARFQPEYRSNLLNRQQSE TVLTVKKGNCPVRKATFTLTESAIAHLATLADDCDVAKSKLIRFLIEHHFNLSPEQRKQKEKSIIVE
Sequences:
>Translated_147_residues MGLADLKKNSTPSSSTHRQIQTSQLALDDLIDDFINDASRYASGQEVLASKQHKVIDLERQKARFQPEYRSNLLNRQQSE TVLTVKKGNCPVRKATFTLTESAIAHLATLADDCDVAKSKLIRFLIEHHFNLSPEQRKQKEKSIIVE >Mature_146_residues GLADLKKNSTPSSSTHRQIQTSQLALDDLIDDFINDASRYASGQEVLASKQHKVIDLERQKARFQPEYRSNLLNRQQSET VLTVKKGNCPVRKATFTLTESAIAHLATLADDCDVAKSKLIRFLIEHHFNLSPEQRKQKEKSIIVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16647; Mature: 16516
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLADLKKNSTPSSSTHRQIQTSQLALDDLIDDFINDASRYASGQEVLASKQHKVIDLER CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH QKARFQPEYRSNLLNRQQSETVLTVKKGNCPVRKATFTLTESAIAHLATLADDCDVAKSK HHHHCCCHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIRFLIEHHFNLSPEQRKQKEKSIIVE HHHHHHHHCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure GLADLKKNSTPSSSTHRQIQTSQLALDDLIDDFINDASRYASGQEVLASKQHKVIDLER CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHH QKARFQPEYRSNLLNRQQSETVLTVKKGNCPVRKATFTLTESAIAHLATLADDCDVAKSK HHHHCCCHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIRFLIEHHFNLSPEQRKQKEKSIIVE HHHHHHHHCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA