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The map label for this gene is recN [H]

Identifier: 157960997

GI number: 157960997

Start: 1413389

End: 1415050

Strand: Reverse

Name: recN [H]

Synonym: Spea_1169

Alternate gene names: 157960997

Gene position: 1415050-1413389 (Counterclockwise)

Preceding gene: 157960998

Following gene: 157960987

Centisome position: 27.35

GC content: 48.13

Gene sequence:

>1662_bases
ATGCTTTGCCAACTCAGCATCAACAACTTTGCTATTGTGCGTTTCTTAGAGCTCGACTTTAAAGCCGGCATGACCAGTAT
TACTGGTGAAACCGGTGCGGGTAAATCGATTGCTATCGATGCCCTCGGCCTATGTTTAGGTAACCGAGCCGACGCCAATA
CCATTAGACCTGGTGCCACTAAGGCCGAAGTAAGTGCCCGCTTTTTATTAGATGATACCCCAGCGGCAAGACGCTGGCTT
GAAGATAACGACCTTGAGCTCGGAGATGAATGTATCCTGCGCCGCACCATAAGCAGCGACGGCCGCTCACGCGCCTATAT
CAATGGTAACCCTGTACCTTTGGCGCAGATAAAGTCCCTTGGTCAGTTGCTTATTGGTATTCATGGCCAACATGCTCACC
ACGCTATGCTAAAGAGTGAGCATCAACTGATCCTGTTAGATAGCTATGCTAACCATAAAATGCTGCTCGACAGTGTCGCT
GCCAGTTACCACAGATGTAAAACCACTGAGAAGCAACTGCACCAACTTGAGATGTCGCAGCAGGAACGCTTAGCCCGTAA
ACAGCTACTGCAATATCAAGTTGAAGAGCTAAACGAGTTTGCTATCAATGAAGGCGAATTTGAGTCGATTGAGGCCGAAC
ATAAGAAGCTGGCTAACAGCACTGCATTAATCGAACTGTGCCGTAATCAGCTTCATATATTGCAAGACAACGATGATGGC
AGCGTTGAGTCGTTGCTCAACACCTCTATCAGTCAGGGTCAAGATCTTGAGAGTTATGATCCTGAGCTTGCTAGTGTACT
TGCCATGCTTAATGACGCCCTCATTCAGGTGCAAGAGAGCAGCAGCGAAATTGAGCGTTACTTAGATGGCTTAGAGCTGG
ACCCCGAGTATTTTGCTCATCTAGAGCAGCGCCTGTCTAAGACCATGCAACTTGCCCGTAAGCATCAAGTAATGCCAAAT
GAGCTTTATACGCATCACCAAAGTTTATTGGAAGAGCTTGAAGACTTAGGCTCAGACTCTGACAAACTAGATGATATTCG
TGAGCAGCTAAACGCAAATCGCGAAGCTTACCTGCAACACGCTAGAAAGCTCAGCCAAAGCCGTAGCCGTTACGCTAAAG
AGTTAGATAAACAGGTGACTCAGTCTATCCATGAGCTCAACATGCCTAAGGGCAAGTTTACCATTGCAGTGAACTTCAAT
GAGGCAGTTATCACCCCAACAGGTTGTGACAGCATTGAGTTTTTAGTGTCAACGAACCCTGGTCAGCCGCTACAGCCTAT
CGCTAAAGTTGCCTCTGGTGGTGAGCTATCACGCATCGGCTTAGGTATTCAGGTGATCACCGCCAAGAAAGTCTCGACGC
CTACGTTAATCTTCGATGAAGTCGATGTGGGAATTTCAGGGCCAACCGCAGCGGTTGTTGGGCGTATGCTGCGTAGCCTT
GGCGAGTCGACTCAGGTCTTTTGTGTGACTCACTTGCCACAAGTTGCCGGTAACGGCCATCAACATATGTTCGTCAATAA
GAGTAGCAAGGCTGGTCAAACTGAGACCTCTATGGTGGCGCTAGATAAAACCCAGCGTATCGAAGAGTTAGCGCGCTTAT
TAGGCGGCGACACCATCACCAACAACACCTTGGCTAACGCCAAAGAGTTGCTACTAAGTTAA

Upstream 100 bases:

>100_bases
AACGTGATTCACCTCAACGGATTTACCAACAGGGTATTTACTGTATGAATAAACAGTATATACTGTTTAACCATACAGTG
TTTTGATAAAGGACATCACT

Downstream 100 bases:

>100_bases
TTTTTAAAACTTATAAAAACTAAAACCCATAAAACAAAATGCAGAGCTAAGCTCTGCATTTTTTATGTTGCTAACTATTT
GATGCTAACAGATGCGATTA

Product: recombination and repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MLCQLSINNFAIVRFLELDFKAGMTSITGETGAGKSIAIDALGLCLGNRADANTIRPGATKAEVSARFLLDDTPAARRWL
EDNDLELGDECILRRTISSDGRSRAYINGNPVPLAQIKSLGQLLIGIHGQHAHHAMLKSEHQLILLDSYANHKMLLDSVA
ASYHRCKTTEKQLHQLEMSQQERLARKQLLQYQVEELNEFAINEGEFESIEAEHKKLANSTALIELCRNQLHILQDNDDG
SVESLLNTSISQGQDLESYDPELASVLAMLNDALIQVQESSSEIERYLDGLELDPEYFAHLEQRLSKTMQLARKHQVMPN
ELYTHHQSLLEELEDLGSDSDKLDDIREQLNANREAYLQHARKLSQSRSRYAKELDKQVTQSIHELNMPKGKFTIAVNFN
EAVITPTGCDSIEFLVSTNPGQPLQPIAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRSL
GESTQVFCVTHLPQVAGNGHQHMFVNKSSKAGQTETSMVALDKTQRIEELARLLGGDTITNNTLANAKELLLS

Sequences:

>Translated_553_residues
MLCQLSINNFAIVRFLELDFKAGMTSITGETGAGKSIAIDALGLCLGNRADANTIRPGATKAEVSARFLLDDTPAARRWL
EDNDLELGDECILRRTISSDGRSRAYINGNPVPLAQIKSLGQLLIGIHGQHAHHAMLKSEHQLILLDSYANHKMLLDSVA
ASYHRCKTTEKQLHQLEMSQQERLARKQLLQYQVEELNEFAINEGEFESIEAEHKKLANSTALIELCRNQLHILQDNDDG
SVESLLNTSISQGQDLESYDPELASVLAMLNDALIQVQESSSEIERYLDGLELDPEYFAHLEQRLSKTMQLARKHQVMPN
ELYTHHQSLLEELEDLGSDSDKLDDIREQLNANREAYLQHARKLSQSRSRYAKELDKQVTQSIHELNMPKGKFTIAVNFN
EAVITPTGCDSIEFLVSTNPGQPLQPIAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRSL
GESTQVFCVTHLPQVAGNGHQHMFVNKSSKAGQTETSMVALDKTQRIEELARLLGGDTITNNTLANAKELLLS
>Mature_553_residues
MLCQLSINNFAIVRFLELDFKAGMTSITGETGAGKSIAIDALGLCLGNRADANTIRPGATKAEVSARFLLDDTPAARRWL
EDNDLELGDECILRRTISSDGRSRAYINGNPVPLAQIKSLGQLLIGIHGQHAHHAMLKSEHQLILLDSYANHKMLLDSVA
ASYHRCKTTEKQLHQLEMSQQERLARKQLLQYQVEELNEFAINEGEFESIEAEHKKLANSTALIELCRNQLHILQDNDDG
SVESLLNTSISQGQDLESYDPELASVLAMLNDALIQVQESSSEIERYLDGLELDPEYFAHLEQRLSKTMQLARKHQVMPN
ELYTHHQSLLEELEDLGSDSDKLDDIREQLNANREAYLQHARKLSQSRSRYAKELDKQVTQSIHELNMPKGKFTIAVNFN
EAVITPTGCDSIEFLVSTNPGQPLQPIAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRSL
GESTQVFCVTHLPQVAGNGHQHMFVNKSSKAGQTETSMVALDKTQRIEELARLLGGDTITNNTLANAKELLLS

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=551, Percent_Identity=57.5317604355717, Blast_Score=624, Evalue=1e-180,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61147; Mature: 61147

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCQLSINNFAIVRFLELDFKAGMTSITGETGAGKSIAIDALGLCLGNRADANTIRPGAT
CEEEEECCCEEEEHEEHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCC
KAEVSARFLLDDTPAARRWLEDNDLELGDECILRRTISSDGRSRAYINGNPVPLAQIKSL
HHHHHEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHH
GQLLIGIHGQHAHHAMLKSEHQLILLDSYANHKMLLDSVAASYHRCKTTEKQLHQLEMSQ
HHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QERLARKQLLQYQVEELNEFAINEGEFESIEAEHKKLANSTALIELCRNQLHILQDNDDG
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
SVESLLNTSISQGQDLESYDPELASVLAMLNDALIQVQESSSEIERYLDGLELDPEYFAH
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LEQRLSKTMQLARKHQVMPNELYTHHQSLLEELEDLGSDSDKLDDIREQLNANREAYLQH
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHH
ARKLSQSRSRYAKELDKQVTQSIHELNMPKGKFTIAVNFNEAVITPTGCDSIEFLVSTNP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCCCEEEEEECCC
GQPLQPIAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRSL
CCCHHHHHHHHCCCCEEEECCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHC
GESTQVFCVTHLPQVAGNGHQHMFVNKSSKAGQTETSMVALDKTQRIEELARLLGGDTIT
CCCCEEEEEECCHHHHCCCCCEEEEECCCCCCCCHHHEEEHHHHHHHHHHHHHHCCCCCC
NNTLANAKELLLS
CCHHHHHHHHHCC
>Mature Secondary Structure
MLCQLSINNFAIVRFLELDFKAGMTSITGETGAGKSIAIDALGLCLGNRADANTIRPGAT
CEEEEECCCEEEEHEEHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCC
KAEVSARFLLDDTPAARRWLEDNDLELGDECILRRTISSDGRSRAYINGNPVPLAQIKSL
HHHHHEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHH
GQLLIGIHGQHAHHAMLKSEHQLILLDSYANHKMLLDSVAASYHRCKTTEKQLHQLEMSQ
HHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QERLARKQLLQYQVEELNEFAINEGEFESIEAEHKKLANSTALIELCRNQLHILQDNDDG
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
SVESLLNTSISQGQDLESYDPELASVLAMLNDALIQVQESSSEIERYLDGLELDPEYFAH
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LEQRLSKTMQLARKHQVMPNELYTHHQSLLEELEDLGSDSDKLDDIREQLNANREAYLQH
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHH
ARKLSQSRSRYAKELDKQVTQSIHELNMPKGKFTIAVNFNEAVITPTGCDSIEFLVSTNP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCCCEEEEEECCC
GQPLQPIAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRSL
CCCHHHHHHHHCCCCEEEECCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHC
GESTQVFCVTHLPQVAGNGHQHMFVNKSSKAGQTETSMVALDKTQRIEELARLLGGDTIT
CCCCEEEEEECCHHHHCCCCCEEEEECCCCCCCCHHHEEEHHHHHHHHHHHHHHCCCCCC
NNTLANAKELLLS
CCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3037486; 9205837; 9278503 [H]