| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960986
Identifier: 157960986
GI number: 157960986
Start: 1402275
End: 1403432
Strand: Reverse
Name: 157960986
Synonym: Spea_1158
Alternate gene names: NA
Gene position: 1403432-1402275 (Counterclockwise)
Preceding gene: 157960987
Following gene: 157960985
Centisome position: 27.12
GC content: 45.25
Gene sequence:
>1158_bases ATGGACGATAAAGCGAGCCCCTCTCAGGTGAATCACAGTTCCGTAAGTGATGCCTCGTCGAGTGAGATACAAACAGCGGC GGCAGCCACAACAACTCAAGCCCAGCAGAAAAAATCTACCGGCTTCTTAAACAGCATCAACCACTTTCGTGGCATCGCGA TTATCTTTATCGTCATGGCCCACTGCTACCGACCTGCAGGCTGGGAGATAGAAACCTTTGCCGACAAGGCTTGGTTTAAT TTGATGATGAATGGCACGGTATTTTTTGTATTTATCTCAGGCTTTCTGTTCCACCATGTGTTTTATCATCGCTGGGATTA CAAGAAATACATGAAGAGTAAAACCAAATTTGTGTTTTTGCCCTATCTGCTTCTTTCCCTACCTTGGATTGTCTGGCACC TGACCGTCGGTACGGATCCTATGATGCATCAAGCGCTTGCCAATATCACGGCTCCCGCACAGGCCGCGAGCTGGTATGTG ATCACCGGCCGTACGCTTACCGCATATTGGTATATTCCCATGGGCATGATGCTGTTTGCCTTGTCACCTTGGGTCATGTA CCTCATTAAAAAGCAGCAAATACTCTACTACGCCATTCCATTGTTATTAATTGCCATCATGGTGCATAGACCGATTTCAA ACCTCAATGCTATCCAATCTTTAGTCTATTTCTTACCAGTCTATCTTTTAGGCGTTTGGGGATCGGCTCACCGCGATAAA CTGTTTCCGTTTATCGATAAATATTGGATCCCAATGTTTTTTGTGGGTGTTGCCTTGGCACTGATTCAAGCCGAATATTT TGGTGCAGGCGTACTCAATAAGGCACCGTTTGAGATGACTGTGCCTGACTTGATGCTACCGCAAAAGATATTACTGACCT TAGTCATATTGGCGATTTTAAATAAGTTTGAGCATATCTCGATAGCGCCTCTGCAAAAACTGGCCGAGGTCAGCTTTGCC ATCTACTTTATTCACCCTTGGATCACGACCCCTTGGTGGATGATCTATGATAGCCCGGATCTATTGGGTCTAGCCGGTAA AGGCAATATCTTCACTACACTAATCGTCACCTTAGTAGTGGTGGCTATCTCTTACGTAATCGCGGTAATGATAAAGAAGA TGCTAAGTAAACGTAGCCGCTATCTGATTGGTTGGTAA
Upstream 100 bases:
>100_bases GCCGTTTGGTATAAATTAGCCAATCACACCGTGACGCTATCGCTAACAATAATAAAAACGCTTTCAACAGATTTGAAAGT GACTAACGGACAACAAAGCT
Downstream 100 bases:
>100_bases AGCAAGGCATTAACCAATTAAATCTAAAGATAGACTAGCACTAGAGCTAGAACTCTCAATAATAACGATTAATAAGAAAC TAAAGATTATGTTTAAAGCC
Product: acyltransferase 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MDDKASPSQVNHSSVSDASSSEIQTAAAATTTQAQQKKSTGFLNSINHFRGIAIIFIVMAHCYRPAGWEIETFADKAWFN LMMNGTVFFVFISGFLFHHVFYHRWDYKKYMKSKTKFVFLPYLLLSLPWIVWHLTVGTDPMMHQALANITAPAQAASWYV ITGRTLTAYWYIPMGMMLFALSPWVMYLIKKQQILYYAIPLLLIAIMVHRPISNLNAIQSLVYFLPVYLLGVWGSAHRDK LFPFIDKYWIPMFFVGVALALIQAEYFGAGVLNKAPFEMTVPDLMLPQKILLTLVILAILNKFEHISIAPLQKLAEVSFA IYFIHPWITTPWWMIYDSPDLLGLAGKGNIFTTLIVTLVVVAISYVIAVMIKKMLSKRSRYLIGW
Sequences:
>Translated_385_residues MDDKASPSQVNHSSVSDASSSEIQTAAAATTTQAQQKKSTGFLNSINHFRGIAIIFIVMAHCYRPAGWEIETFADKAWFN LMMNGTVFFVFISGFLFHHVFYHRWDYKKYMKSKTKFVFLPYLLLSLPWIVWHLTVGTDPMMHQALANITAPAQAASWYV ITGRTLTAYWYIPMGMMLFALSPWVMYLIKKQQILYYAIPLLLIAIMVHRPISNLNAIQSLVYFLPVYLLGVWGSAHRDK LFPFIDKYWIPMFFVGVALALIQAEYFGAGVLNKAPFEMTVPDLMLPQKILLTLVILAILNKFEHISIAPLQKLAEVSFA IYFIHPWITTPWWMIYDSPDLLGLAGKGNIFTTLIVTLVVVAISYVIAVMIKKMLSKRSRYLIGW >Mature_385_residues MDDKASPSQVNHSSVSDASSSEIQTAAAATTTQAQQKKSTGFLNSINHFRGIAIIFIVMAHCYRPAGWEIETFADKAWFN LMMNGTVFFVFISGFLFHHVFYHRWDYKKYMKSKTKFVFLPYLLLSLPWIVWHLTVGTDPMMHQALANITAPAQAASWYV ITGRTLTAYWYIPMGMMLFALSPWVMYLIKKQQILYYAIPLLLIAIMVHRPISNLNAIQSLVYFLPVYLLGVWGSAHRDK LFPFIDKYWIPMFFVGVALALIQAEYFGAGVLNKAPFEMTVPDLMLPQKILLTLVILAILNKFEHISIAPLQKLAEVSFA IYFIHPWITTPWWMIYDSPDLLGLAGKGNIFTTLIVTLVVVAISYVIAVMIKKMLSKRSRYLIGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43961; Mature: 43961
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDKASPSQVNHSSVSDASSSEIQTAAAATTTQAQQKKSTGFLNSINHFRGIAIIFIVMA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH HCYRPAGWEIETFADKAWFNLMMNGTVFFVFISGFLFHHVFYHRWDYKKYMKSKTKFVFL HHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHH PYLLLSLPWIVWHLTVGTDPMMHQALANITAPAQAASWYVITGRTLTAYWYIPMGMMLFA HHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEHHHHHHHHHH LSPWVMYLIKKQQILYYAIPLLLIAIMVHRPISNLNAIQSLVYFLPVYLLGVWGSAHRDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH LFPFIDKYWIPMFFVGVALALIQAEYFGAGVLNKAPFEMTVPDLMLPQKILLTLVILAIL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHH NKFEHISIAPLQKLAEVSFAIYFIHPWITTPWWMIYDSPDLLGLAGKGNIFTTLIVTLVV HHCCCCCHHHHHHHHHHHHEEEEEECCCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHH VAISYVIAVMIKKMLSKRSRYLIGW HHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDDKASPSQVNHSSVSDASSSEIQTAAAATTTQAQQKKSTGFLNSINHFRGIAIIFIVMA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH HCYRPAGWEIETFADKAWFNLMMNGTVFFVFISGFLFHHVFYHRWDYKKYMKSKTKFVFL HHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHH PYLLLSLPWIVWHLTVGTDPMMHQALANITAPAQAASWYVITGRTLTAYWYIPMGMMLFA HHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEHHHHHHHHHH LSPWVMYLIKKQQILYYAIPLLLIAIMVHRPISNLNAIQSLVYFLPVYLLGVWGSAHRDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH LFPFIDKYWIPMFFVGVALALIQAEYFGAGVLNKAPFEMTVPDLMLPQKILLTLVILAIL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHH NKFEHISIAPLQKLAEVSFAIYFIHPWITTPWWMIYDSPDLLGLAGKGNIFTTLIVTLVV HHCCCCCHHHHHHHHHHHHEEEEEECCCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHH VAISYVIAVMIKKMLSKRSRYLIGW HHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA