| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960948
Identifier: 157960948
GI number: 157960948
Start: 1358352
End: 1360235
Strand: Reverse
Name: 157960948
Synonym: Spea_1120
Alternate gene names: NA
Gene position: 1360235-1358352 (Counterclockwise)
Preceding gene: 157960949
Following gene: 157960947
Centisome position: 26.29
GC content: 47.51
Gene sequence:
>1884_bases ATGCCTATAAAAACAAAAGTTAGCCTTATTGCCCTCTCGCTCTCATTTGGGCTCAGCGCCAGCACTATGCTTGGCGCCTC CGCCGTCGCCGCCCCAACTTCCACTTCACTATCTAGCCCAAGTGAGCCCGTTGCCCATAAGGCAGAGAGTGAGTCAGAAA AAGCCAACGCCTTATTCGAAAGCATTTTCATGGAAAATGTCATGGCAAGCCCCATCTCCCAAACCCATCTCGGCATTAAA ACCGATTACGATAAATGGGATGAGATGGGCGATACTGCCGATGATGCCGCCCTTGCCCGCGACAAAAAACATTTAGCTCA GCTTCAAAAAATCAACTCAAGCAAGCTCGATAGACAAACTCTACTTAGCTACCAACTACTAACGCAAAAGCTTCAGCAAG CCATTAAAGACGATAAATGGCGTTACCATAGCTACCCCGTTAACCAGATGTATGGCGGCCACTCGCAAATAGCTTCGTTT CTGATAAACCAGCACCAAATTGGTAATGTCGAAGATGCCAAGGCCTATATAAGCCGCTTGCAAGGCGTGCCTAAACGTTT ATCTCAGCTACAAACTGCATTAGAAGTGCGTGAAAGCAAAGGCATTATCGCACCTAAGTTTGTCTTTCCTTACGTGATCA ACGACAGCAAGAACATAGTTGCAGGCGCACCATTTACAGCAAATTCGGCGACTAATGAAAGAGTAAAAGACAGCGCTCTT TGGGCCGACTTTAAGCGTAAAATGGCAAAACTTGAAATCAGCGATAGCGACAAGGAAAGCTTATTACGTGAGGCTAAAAG CGCATTAGTAACAGATGTAAAACCTGCCTACGACAAGCTCATCGCCTATATGACCAAGCTTGAAACTAAAGCCGATACCC GCGATGGCGCCTGGAAATTCCCTCAAGGTGACTCGTATTACAACAACGCACTCGCACGCACGACAACAACCGATATGAGC GCCAGTGAAATCCATGAACTTGGCTTATCGGAAGTGGCGCGTATTCACAGCGAGATGCGTGACATCATGAACAAGGTTAA CTTCGAAGGCTCACTCGCTGAGTTCTTTAAGTTCATGCGTGATGACGAGCAGTTTTACTATGCCAATGACGATAAGGGTC GCCAAGCCTACTTAAGTGAAGCCACCGCACTTATCGACACCATGAGCGGTCGCTTAGACGAAGTGTTCAAGGTCAAACCT AAGGCACCAATGATCGTAAAACAGGTCGAAGCCTTTAGAGAGAAGTCTGCCGGTAAGGCGTTTTATAGCAACCCATCACC CGATGGCAGCCGTCCAGGCACTTACTACGCTAACCTGTATGATATGAAGGCGATGCCAAAGTATCAGATGGAAGCTCTGG CTTACCATGAAGGCACGCCGGGGCATCATATGCAGATAGCAATCGCTCAAGAGCTGGAGGCTGTACCTAAGTTTCGTAAG TTCGGCGGTTACACTGCATATATTGAGGGCTGGGGTCTATACAGCGAGTACTTCCCGAAGGAGATGGGCATGTATTCAGA TCCCTACTCTGACTTTGGCCGCTTAGCCATGGAGCTTTGGCGCGCATGCCGCTTAGTAGTCGATACAGGTATTCATGCTA AGAAATGGACTCGTGAAGAGTCCATCGAGTACTACGTCACTAATACGCCCAATGCTAAATCTGACGCTATCAAGATGGTT GAACGTCATATCGTGATGCCATCACAAGCCACTGCCTACAAGGTGGGCATGCTTAAGCTATTGGCGCTTAGAGATAAGGC GCAGCAAGCGCTAGGCGATAAGTTTGATATTCGTGATTTTCACACTATCGTACTCAAAAATGGCCCCGTACCATTAGATG TACTAGAAAGTGAAATCGACCTGTGGATTGAGCAAAACAGCTAA
Upstream 100 bases:
>100_bases CCACAGCCTATAGATTTGGAAATATTTGCTAACACTTAGATCAAAAAATTAACCGCTGGCTTCTTTAGGATAACAATCAT AATTCTAAGGAAGCCTAAAA
Downstream 100 bases:
>100_bases ACGAATCTGATTAGAAGATCTCAATGAAACCAACGAATCGGTCACTAGATGTGACCGATTTTTTATTGTTCCATCCACAA TTTTATACCTAGCGGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 627; Mature: 626
Protein sequence:
>627_residues MPIKTKVSLIALSLSFGLSASTMLGASAVAAPTSTSLSSPSEPVAHKAESESEKANALFESIFMENVMASPISQTHLGIK TDYDKWDEMGDTADDAALARDKKHLAQLQKINSSKLDRQTLLSYQLLTQKLQQAIKDDKWRYHSYPVNQMYGGHSQIASF LINQHQIGNVEDAKAYISRLQGVPKRLSQLQTALEVRESKGIIAPKFVFPYVINDSKNIVAGAPFTANSATNERVKDSAL WADFKRKMAKLEISDSDKESLLREAKSALVTDVKPAYDKLIAYMTKLETKADTRDGAWKFPQGDSYYNNALARTTTTDMS ASEIHELGLSEVARIHSEMRDIMNKVNFEGSLAEFFKFMRDDEQFYYANDDKGRQAYLSEATALIDTMSGRLDEVFKVKP KAPMIVKQVEAFREKSAGKAFYSNPSPDGSRPGTYYANLYDMKAMPKYQMEALAYHEGTPGHHMQIAIAQELEAVPKFRK FGGYTAYIEGWGLYSEYFPKEMGMYSDPYSDFGRLAMELWRACRLVVDTGIHAKKWTREESIEYYVTNTPNAKSDAIKMV ERHIVMPSQATAYKVGMLKLLALRDKAQQALGDKFDIRDFHTIVLKNGPVPLDVLESEIDLWIEQNS
Sequences:
>Translated_627_residues MPIKTKVSLIALSLSFGLSASTMLGASAVAAPTSTSLSSPSEPVAHKAESESEKANALFESIFMENVMASPISQTHLGIK TDYDKWDEMGDTADDAALARDKKHLAQLQKINSSKLDRQTLLSYQLLTQKLQQAIKDDKWRYHSYPVNQMYGGHSQIASF LINQHQIGNVEDAKAYISRLQGVPKRLSQLQTALEVRESKGIIAPKFVFPYVINDSKNIVAGAPFTANSATNERVKDSAL WADFKRKMAKLEISDSDKESLLREAKSALVTDVKPAYDKLIAYMTKLETKADTRDGAWKFPQGDSYYNNALARTTTTDMS ASEIHELGLSEVARIHSEMRDIMNKVNFEGSLAEFFKFMRDDEQFYYANDDKGRQAYLSEATALIDTMSGRLDEVFKVKP KAPMIVKQVEAFREKSAGKAFYSNPSPDGSRPGTYYANLYDMKAMPKYQMEALAYHEGTPGHHMQIAIAQELEAVPKFRK FGGYTAYIEGWGLYSEYFPKEMGMYSDPYSDFGRLAMELWRACRLVVDTGIHAKKWTREESIEYYVTNTPNAKSDAIKMV ERHIVMPSQATAYKVGMLKLLALRDKAQQALGDKFDIRDFHTIVLKNGPVPLDVLESEIDLWIEQNS >Mature_626_residues PIKTKVSLIALSLSFGLSASTMLGASAVAAPTSTSLSSPSEPVAHKAESESEKANALFESIFMENVMASPISQTHLGIKT DYDKWDEMGDTADDAALARDKKHLAQLQKINSSKLDRQTLLSYQLLTQKLQQAIKDDKWRYHSYPVNQMYGGHSQIASFL INQHQIGNVEDAKAYISRLQGVPKRLSQLQTALEVRESKGIIAPKFVFPYVINDSKNIVAGAPFTANSATNERVKDSALW ADFKRKMAKLEISDSDKESLLREAKSALVTDVKPAYDKLIAYMTKLETKADTRDGAWKFPQGDSYYNNALARTTTTDMSA SEIHELGLSEVARIHSEMRDIMNKVNFEGSLAEFFKFMRDDEQFYYANDDKGRQAYLSEATALIDTMSGRLDEVFKVKPK APMIVKQVEAFREKSAGKAFYSNPSPDGSRPGTYYANLYDMKAMPKYQMEALAYHEGTPGHHMQIAIAQELEAVPKFRKF GGYTAYIEGWGLYSEYFPKEMGMYSDPYSDFGRLAMELWRACRLVVDTGIHAKKWTREESIEYYVTNTPNAKSDAIKMVE RHIVMPSQATAYKVGMLKLLALRDKAQQALGDKFDIRDFHTIVLKNGPVPLDVLESEIDLWIEQNS
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70503; Mature: 70372
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKTKVSLIALSLSFGLSASTMLGASAVAAPTSTSLSSPSEPVAHKAESESEKANALFE CCCCHHHHEEEEEHHCCCCHHHHHCCHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHH SIFMENVMASPISQTHLGIKTDYDKWDEMGDTADDAALARDKKHLAQLQKINSSKLDRQT HHHHHHHHHCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH LLSYQLLTQKLQQAIKDDKWRYHSYPVNQMYGGHSQIASFLINQHQIGNVEDAKAYISRL HHHHHHHHHHHHHHHHCCCCEECCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH QGVPKRLSQLQTALEVRESKGIIAPKFVFPYVINDSKNIVAGAPFTANSATNERVKDSAL HCHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEECCCCCEEECCCCCCCCCCHHHHHHHHH WADFKRKMAKLEISDSDKESLLREAKSALVTDVKPAYDKLIAYMTKLETKADTRDGAWKF HHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC PQGDSYYNNALARTTTTDMSASEIHELGLSEVARIHSEMRDIMNKVNFEGSLAEFFKFMR CCCCCHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC DDEQFYYANDDKGRQAYLSEATALIDTMSGRLDEVFKVKPKAPMIVKQVEAFREKSAGKA CCCCEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC FYSNPSPDGSRPGTYYANLYDMKAMPKYQMEALAYHEGTPGHHMQIAIAQELEAVPKFRK CCCCCCCCCCCCCCEEEEEHHCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHH FGGYTAYIEGWGLYSEYFPKEMGMYSDPYSDFGRLAMELWRACRLVVDTGIHAKKWTREE HCCEEEEEECCCCHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC SIEYYVTNTPNAKSDAIKMVERHIVMPSQATAYKVGMLKLLALRDKAQQALGDKFDIRDF CCEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE HTIVLKNGPVPLDVLESEIDLWIEQNS EEEEEECCCCCHHHHHCCHHEEEECCC >Mature Secondary Structure PIKTKVSLIALSLSFGLSASTMLGASAVAAPTSTSLSSPSEPVAHKAESESEKANALFE CCCHHHHEEEEEHHCCCCHHHHHCCHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHH SIFMENVMASPISQTHLGIKTDYDKWDEMGDTADDAALARDKKHLAQLQKINSSKLDRQT HHHHHHHHHCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH LLSYQLLTQKLQQAIKDDKWRYHSYPVNQMYGGHSQIASFLINQHQIGNVEDAKAYISRL HHHHHHHHHHHHHHHHCCCCEECCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH QGVPKRLSQLQTALEVRESKGIIAPKFVFPYVINDSKNIVAGAPFTANSATNERVKDSAL HCHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEECCCCCEEECCCCCCCCCCHHHHHHHHH WADFKRKMAKLEISDSDKESLLREAKSALVTDVKPAYDKLIAYMTKLETKADTRDGAWKF HHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC PQGDSYYNNALARTTTTDMSASEIHELGLSEVARIHSEMRDIMNKVNFEGSLAEFFKFMR CCCCCHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC DDEQFYYANDDKGRQAYLSEATALIDTMSGRLDEVFKVKPKAPMIVKQVEAFREKSAGKA CCCCEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC FYSNPSPDGSRPGTYYANLYDMKAMPKYQMEALAYHEGTPGHHMQIAIAQELEAVPKFRK CCCCCCCCCCCCCCEEEEEHHCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHH FGGYTAYIEGWGLYSEYFPKEMGMYSDPYSDFGRLAMELWRACRLVVDTGIHAKKWTREE HCCEEEEEECCCCHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC SIEYYVTNTPNAKSDAIKMVERHIVMPSQATAYKVGMLKLLALRDKAQQALGDKFDIRDF CCEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE HTIVLKNGPVPLDVLESEIDLWIEQNS EEEEEECCCCCHHHHHCCHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA