| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yedI [H]
Identifier: 157960645
GI number: 157960645
Start: 1014119
End: 1015063
Strand: Direct
Name: yedI [H]
Synonym: Spea_0817
Alternate gene names: 157960645
Gene position: 1014119-1015063 (Clockwise)
Preceding gene: 157960643
Following gene: 157960646
Centisome position: 19.6
GC content: 48.47
Gene sequence:
>945_bases ATGGCAGGGGCAAGCTTATTAACCTTGTTAGATGATATCGCGACGATTTTAGATGATGTCGCCGCAATGAGTAAAATTGC CGCCCGTAAAACGGCGGGTGTGTTGGGCGATGATTTAGCCTTAAACGCTCAGCAGGTGTCGGGCGTTAGCGCCGATAGAG AGCTGCCTGTGGTGTGGGCGGTTGCAGTAGGTTCATTTAAGAATAAGTGCATCTTAGTGCCTGCGGCTATGTTAATCAGT GCCTTTATTCCTTGGGCGGTGACACCGCTACTGATGTTTGGTGGCCTGTACCTTTGCTATGAAGGTTTCGAAAAAATTTA CCACAGTTATTCTGCCAACAAGCACCACCAAATCGATGAGTCTCAGGCAAGCCCAGAGGAGATTGTCGATCTAAAGCTAT ACGAGGCCAATAAGGTTAAAGGCGCGATACGGACCGACTTTGTGTTGTCAGCGGAGATCATCGCCATTACCTTAGGCATT GTGGCCGATAAGAGCTTGAGTACTCAATTTTTCACCCTAAGTGTTATCGCTATCGTGATGACCATAGGTGTGTATGGTTT GGTGGCTGGTATAGTCAAAATTGATGATGCAGGTCTGTATCTGAGTCAGCGTCCCGGTGAAACTCTGTGGGCGAGATTTA AGCGTCGTTTTGGTCTGATGCTGCTTAACTCGGCGCCTTATCTAATGAAGACTTTATCTGTGGTGGGCACCATAGCCATG TTTATGGTGGGCGGCGGCATTTTAACTCATGGCTGGCACTGGATGGGGGCGCAGATAACGTTGGCGGCGCAGTGGATTGA AGCATTCGAGTTTGTCGGACCTGTGGTCGCCTTTATCACTCCAAGTATTTTAAACGCAATTTTTGGCGTCATAGCCGGTG CTGTAGCGGTATTGCTGATGGAGCTGTTTATTAAGCTAAAGGGCGATAAAGGCTCTGCCGAATAG
Upstream 100 bases:
>100_bases ACAATAACCGCTATAGTGTGAGTATTATTGATGTAAATCGCTAGATTAAGTATGAGATGGATTTTCGGCGTGAGCGCCAT TAAGTGATAAAGGAGTCGAT
Downstream 100 bases:
>100_bases CTTTAGTGTTAAAACTTAATTGTTAGCTTAGATATCCATATGGAAAGGTCGTAATGGCGAATACAAGTACCAAAACAAAC AGGGTCAAACTAGCAAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MAGASLLTLLDDIATILDDVAAMSKIAARKTAGVLGDDLALNAQQVSGVSADRELPVVWAVAVGSFKNKCILVPAAMLIS AFIPWAVTPLLMFGGLYLCYEGFEKIYHSYSANKHHQIDESQASPEEIVDLKLYEANKVKGAIRTDFVLSAEIIAITLGI VADKSLSTQFFTLSVIAIVMTIGVYGLVAGIVKIDDAGLYLSQRPGETLWARFKRRFGLMLLNSAPYLMKTLSVVGTIAM FMVGGGILTHGWHWMGAQITLAAQWIEAFEFVGPVVAFITPSILNAIFGVIAGAVAVLLMELFIKLKGDKGSAE
Sequences:
>Translated_314_residues MAGASLLTLLDDIATILDDVAAMSKIAARKTAGVLGDDLALNAQQVSGVSADRELPVVWAVAVGSFKNKCILVPAAMLIS AFIPWAVTPLLMFGGLYLCYEGFEKIYHSYSANKHHQIDESQASPEEIVDLKLYEANKVKGAIRTDFVLSAEIIAITLGI VADKSLSTQFFTLSVIAIVMTIGVYGLVAGIVKIDDAGLYLSQRPGETLWARFKRRFGLMLLNSAPYLMKTLSVVGTIAM FMVGGGILTHGWHWMGAQITLAAQWIEAFEFVGPVVAFITPSILNAIFGVIAGAVAVLLMELFIKLKGDKGSAE >Mature_313_residues AGASLLTLLDDIATILDDVAAMSKIAARKTAGVLGDDLALNAQQVSGVSADRELPVVWAVAVGSFKNKCILVPAAMLISA FIPWAVTPLLMFGGLYLCYEGFEKIYHSYSANKHHQIDESQASPEEIVDLKLYEANKVKGAIRTDFVLSAEIIAITLGIV ADKSLSTQFFTLSVIAIVMTIGVYGLVAGIVKIDDAGLYLSQRPGETLWARFKRRFGLMLLNSAPYLMKTLSVVGTIAMF MVGGGILTHGWHWMGAQITLAAQWIEAFEFVGPVVAFITPSILNAIFGVIAGAVAVLLMELFIKLKGDKGSAE
Specific function: Unknown
COG id: COG2354
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788268, Length=313, Percent_Identity=55.9105431309904, Blast_Score=313, Evalue=9e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008526 [H]
Pfam domain/function: PF05661 DUF808 [H]
EC number: NA
Molecular weight: Translated: 33687; Mature: 33556
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGASLLTLLDDIATILDDVAAMSKIAARKTAGVLGDDLALNAQQVSGVSADRELPVVWA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEEE VAVGSFKNKCILVPAAMLISAFIPWAVTPLLMFGGLYLCYEGFEKIYHSYSANKHHQIDE EECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SQASPEEIVDLKLYEANKVKGAIRTDFVLSAEIIAITLGIVADKSLSTQFFTLSVIAIVM CCCCHHHHHEEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH TIGVYGLVAGIVKIDDAGLYLSQRPGETLWARFKRRFGLMLLNSAPYLMKTLSVVGTIAM HHHHHHHHHHHHEECCCCEEECCCCCHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHH FMVGGGILTHGWHWMGAQITLAAQWIEAFEFVGPVVAFITPSILNAIFGVIAGAVAVLLM HHHCCCHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELFIKLKGDKGSAE HHHHHHCCCCCCCC >Mature Secondary Structure AGASLLTLLDDIATILDDVAAMSKIAARKTAGVLGDDLALNAQQVSGVSADRELPVVWA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEEE VAVGSFKNKCILVPAAMLISAFIPWAVTPLLMFGGLYLCYEGFEKIYHSYSANKHHQIDE EECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SQASPEEIVDLKLYEANKVKGAIRTDFVLSAEIIAITLGIVADKSLSTQFFTLSVIAIVM CCCCHHHHHEEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH TIGVYGLVAGIVKIDDAGLYLSQRPGETLWARFKRRFGLMLLNSAPYLMKTLSVVGTIAM HHHHHHHHHHHHEECCCCEEECCCCCHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHH FMVGGGILTHGWHWMGAQITLAAQWIEAFEFVGPVVAFITPSILNAIFGVIAGAVAVLLM HHHCCCHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELFIKLKGDKGSAE HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2527357; 7567469 [H]