| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960623
Identifier: 157960623
GI number: 157960623
Start: 982985
End: 984418
Strand: Direct
Name: 157960623
Synonym: Spea_0795
Alternate gene names: NA
Gene position: 982985-984418 (Clockwise)
Preceding gene: 157960622
Following gene: 157960626
Centisome position: 19.0
GC content: 45.4
Gene sequence:
>1434_bases GTGTCTAAAGTCAGAATAAAGCAGGAAGAAGCGCTATCGATTAAATTTCTTCATCAGATGGAGTCCGGTGATAGCCGACG TCTCGATCTGTATTTTTTTCTTCCTAAAGAGATGGGCATTAACCCACAGAGCCTTAATGAGGAGGAGTATTATCACTCCT CGATTACTGGGCGCCGCTCATACTATTCATCGGGGCTACATCTGCCTTTAGTACAGAGTCGCTTTGTGAGCCAGAAAAAG CGCACTGTCGACGAATTCAGGCTCTACTTGAACTTGTTTGCCTACCAGTTTTCGGTGGCGATTGAGACCGACAGCAAGGA GTTGTCTCAGGTTGAAGATCTTGAGAAATTTTATCACTTACTCGATGAGTTGAGTGAGCAGGTCATTCATCTACTCAAGC GTTTTAGACGTAACGAACCCAGTGATGAAAAGTGGAAGTCCTATTTCGAAAACGCCGATAACTATCTGTCTTGGCTATGT GAGCAGCGCTTACTCAAACTGCTTGCCCACGCTCCTAGAAGCAGTGACTTTACTGAAGTGAGCGAAAAGGTGGTTGCGCT ATGTCGAGCCGAGGCCTTGTACCGACAAGAGCATAATTATAACTCGGCACAAACCATCAAAGATCCTAACCGTATTGCCA ATAAGATGCTGCTGCTACGGCGCTTAATTCAGCAAGGTGTCGTGCTTAAAGAGGAGCTAAAAACCTTAGGAGTTGGGCTT AAGAAGATGACCACGGGTATTGCTACTGGCATGGTGATGTTGGTGGTCTCTGCATTGATTATCAAGGCTCAGGGCTTTTT TAGCGGCCTGACGATTGCTTTAGTGCTGACTTTGGCGGTGATCTACGGTTTCCGTGAGATTTTTAAAGACGATATTCGTA ATGCGATGTGGCGTATCATTCAAAAAGGTCGGCCACGTTGGAGTCGAGTGTTAAGTGATACCACCAGTAAAAATATCATC GCACGCCAATTAGTTTGGCTTGAGTTTATGCGTAAAAAGGAGCTACCTGAAGCCGTCTCAAAGATCCTGACTAAGCGACA TAGCCAGAATAAAGTTGACTCAGAGATCTTCCATTACGGTATCCATACTCGAGTTTCGCAGAAGGACTTCTTAGCGGGAT ATTCGATGATCCAGGAGCAGGTTAACTTTAGCTTTGTGCCTTTTGCTCGTAACTTGGAGCGGGGTAAGGCTAAGATCTAT AAGGAGCAAGACGGTAAGATAAGTAATGAGTCCGTTGAACGTCGCTATCAAGTGAATTTGATTGTTGCGCTGCGTGAAGG CAAACAGGAATTCCAATATGCGCGCTACAAAATCACCATGAATCGTTCTGCAATTATTGAGATTACTGAGAGTGACTTGC CTTCTGGGGTTGCCTGTATGAAAGAAGCGCCATTCGAAGAGGAACTTAAAGGTGCAAGCCCTCTCGCTGACTGA
Upstream 100 bases:
>100_bases AATAGGCGAATGGAGATCATTAAGCCAGTTGCATCCCTCATACCATAAAGTTAAATTTTGTCAGTACCTCATCATTTTCT TTGTCATTTAAAAGGTCTAT
Downstream 100 bases:
>100_bases GGGCTCATCTGATGGTTCGAGGCTCATTCTAAGTAAGCTTTATAACTAAATTTATCCTAGGCAAACATAAGCTAAAACTA TGAGTTCAATCTATGTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MSKVRIKQEEALSIKFLHQMESGDSRRLDLYFFLPKEMGINPQSLNEEEYYHSSITGRRSYYSSGLHLPLVQSRFVSQKK RTVDEFRLYLNLFAYQFSVAIETDSKELSQVEDLEKFYHLLDELSEQVIHLLKRFRRNEPSDEKWKSYFENADNYLSWLC EQRLLKLLAHAPRSSDFTEVSEKVVALCRAEALYRQEHNYNSAQTIKDPNRIANKMLLLRRLIQQGVVLKEELKTLGVGL KKMTTGIATGMVMLVVSALIIKAQGFFSGLTIALVLTLAVIYGFREIFKDDIRNAMWRIIQKGRPRWSRVLSDTTSKNII ARQLVWLEFMRKKELPEAVSKILTKRHSQNKVDSEIFHYGIHTRVSQKDFLAGYSMIQEQVNFSFVPFARNLERGKAKIY KEQDGKISNESVERRYQVNLIVALREGKQEFQYARYKITMNRSAIIEITESDLPSGVACMKEAPFEEELKGASPLAD
Sequences:
>Translated_477_residues MSKVRIKQEEALSIKFLHQMESGDSRRLDLYFFLPKEMGINPQSLNEEEYYHSSITGRRSYYSSGLHLPLVQSRFVSQKK RTVDEFRLYLNLFAYQFSVAIETDSKELSQVEDLEKFYHLLDELSEQVIHLLKRFRRNEPSDEKWKSYFENADNYLSWLC EQRLLKLLAHAPRSSDFTEVSEKVVALCRAEALYRQEHNYNSAQTIKDPNRIANKMLLLRRLIQQGVVLKEELKTLGVGL KKMTTGIATGMVMLVVSALIIKAQGFFSGLTIALVLTLAVIYGFREIFKDDIRNAMWRIIQKGRPRWSRVLSDTTSKNII ARQLVWLEFMRKKELPEAVSKILTKRHSQNKVDSEIFHYGIHTRVSQKDFLAGYSMIQEQVNFSFVPFARNLERGKAKIY KEQDGKISNESVERRYQVNLIVALREGKQEFQYARYKITMNRSAIIEITESDLPSGVACMKEAPFEEELKGASPLAD >Mature_476_residues SKVRIKQEEALSIKFLHQMESGDSRRLDLYFFLPKEMGINPQSLNEEEYYHSSITGRRSYYSSGLHLPLVQSRFVSQKKR TVDEFRLYLNLFAYQFSVAIETDSKELSQVEDLEKFYHLLDELSEQVIHLLKRFRRNEPSDEKWKSYFENADNYLSWLCE QRLLKLLAHAPRSSDFTEVSEKVVALCRAEALYRQEHNYNSAQTIKDPNRIANKMLLLRRLIQQGVVLKEELKTLGVGLK KMTTGIATGMVMLVVSALIIKAQGFFSGLTIALVLTLAVIYGFREIFKDDIRNAMWRIIQKGRPRWSRVLSDTTSKNIIA RQLVWLEFMRKKELPEAVSKILTKRHSQNKVDSEIFHYGIHTRVSQKDFLAGYSMIQEQVNFSFVPFARNLERGKAKIYK EQDGKISNESVERRYQVNLIVALREGKQEFQYARYKITMNRSAIIEITESDLPSGVACMKEAPFEEELKGASPLAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55473; Mature: 55342
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVRIKQEEALSIKFLHQMESGDSRRLDLYFFLPKEMGINPQSLNEEEYYHSSITGRRS CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHCCCCCCCCHHHHHHHHCCCCHH YYSSGLHLPLVQSRFVSQKKRTVDEFRLYLNLFAYQFSVAIETDSKELSQVEDLEKFYHL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHH LDELSEQVIHLLKRFRRNEPSDEKWKSYFENADNYLSWLCEQRLLKLLAHAPRSSDFTEV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH SEKVVALCRAEALYRQEHNYNSAQTIKDPNRIANKMLLLRRLIQQGVVLKEELKTLGVGL HHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCH KKMTTGIATGMVMLVVSALIIKAQGFFSGLTIALVLTLAVIYGFREIFKDDIRNAMWRII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKGRPRWSRVLSDTTSKNIIARQLVWLEFMRKKELPEAVSKILTKRHSQNKVDSEIFHYG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHH IHTRVSQKDFLAGYSMIQEQVNFSFVPFARNLERGKAKIYKEQDGKISNESVERRYQVNL HHHCCCHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEE IVALREGKQEFQYARYKITMNRSAIIEITESDLPSGVACMKEAPFEEELKGASPLAD EEEECCCHHHHHHHHHEEEECCCEEEEEECCCCCCCHHHHHCCCCHHHHCCCCCCCC >Mature Secondary Structure SKVRIKQEEALSIKFLHQMESGDSRRLDLYFFLPKEMGINPQSLNEEEYYHSSITGRRS CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHCCCCCCCCHHHHHHHHCCCCHH YYSSGLHLPLVQSRFVSQKKRTVDEFRLYLNLFAYQFSVAIETDSKELSQVEDLEKFYHL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHH LDELSEQVIHLLKRFRRNEPSDEKWKSYFENADNYLSWLCEQRLLKLLAHAPRSSDFTEV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHH SEKVVALCRAEALYRQEHNYNSAQTIKDPNRIANKMLLLRRLIQQGVVLKEELKTLGVGL HHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCH KKMTTGIATGMVMLVVSALIIKAQGFFSGLTIALVLTLAVIYGFREIFKDDIRNAMWRII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKGRPRWSRVLSDTTSKNIIARQLVWLEFMRKKELPEAVSKILTKRHSQNKVDSEIFHYG HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHH IHTRVSQKDFLAGYSMIQEQVNFSFVPFARNLERGKAKIYKEQDGKISNESVERRYQVNL HHHCCCHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEE IVALREGKQEFQYARYKITMNRSAIIEITESDLPSGVACMKEAPFEEELKGASPLAD EEEECCCHHHHHHHHHEEEECCCEEEEEECCCCCCCHHHHHCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA