| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960612
Identifier: 157960612
GI number: 157960612
Start: 969568
End: 970395
Strand: Direct
Name: 157960612
Synonym: Spea_0784
Alternate gene names: NA
Gene position: 969568-970395 (Clockwise)
Preceding gene: 157960610
Following gene: 157960613
Centisome position: 18.74
GC content: 41.18
Gene sequence:
>828_bases ATGCTTAAACTGATATTTACTCTTCTTTTCCTATTTTTTAGCGGGGTTGCCAATGCATACCCTCGCTGTTTTGATGAGCC TTGTATCAGCTATGACAAAGGAACTGTTAGTTATCAAATTGACGATACGCTTGCCGATGGCACACCAGTTAAAATCTCGA GTGAAATAGAAGTGAGCTTTAAAGTGAGCCTGTATCGGGGAGAAATTGTCAATCAACCCACCTTGGTGAAACCAATAGAT ACCACAATTACGATTGTCTGTGAGGATGATATAGACTGCGACTCTATGGATGGTTTAAACCGCCATGCAGGTGAGAGACT TGTATTTTATAACGATTACCTAAGAGAGAAACCTTTCCTCGACTTAGTCGCGGCGAAACACTTTGTTTACCAAGCTGGAA AAACGGCGTTATTTACGACTACTAATTCACTTAGCACAAGTCGAAGAGAGCTTCTTAGCGCTCTGGCGAAAAATTTTGTG GATAATTTGATTACCCAAGCAGGGTCTCCAATCATTTACATCCAGTTGAAAGGTGAGAACGGATTAGTACTGCATTTAAA ATTAGAGCTAAGTAATGACTACTGGAAAATTGCTGATACGGCTGAAGAAGGGCTACGAAATGAGCTTAATCAACTTACAA TTCAGTTTAATCAGAGTGAATATGAAGCATTTTATGCGAACCGCCCATGGAGAGAACATTTTCTATCAGGACTGATAAGA ATGAAACGCTGCAGAGAAACAACTGTCACTTCAACGGTTGTGGACTCTGACGGTATCCCGACTCGAGTGACTCGTACGGT TACGTCCTGTTGGTATGAATACCGGTAA
Upstream 100 bases:
>100_bases TTAGATAGGTGTAGCTGACTTGAATATTATTCAGGCTAATTAAAAAAGTCGTGTGCTAGGTTTAGTGCTTACTAATTTAA CGTTAAGGATAAATGGAATT
Downstream 100 bases:
>100_bases CAGATACTCTTTGCCTTCCTCAATAATACTCATGAACTGTGTGTTCATGGGTATTATTCGTTGTAGTTCATTCACCTGAG TTAAATATGCTTAAAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MLKLIFTLLFLFFSGVANAYPRCFDEPCISYDKGTVSYQIDDTLADGTPVKISSEIEVSFKVSLYRGEIVNQPTLVKPID TTITIVCEDDIDCDSMDGLNRHAGERLVFYNDYLREKPFLDLVAAKHFVYQAGKTALFTTTNSLSTSRRELLSALAKNFV DNLITQAGSPIIYIQLKGENGLVLHLKLELSNDYWKIADTAEEGLRNELNQLTIQFNQSEYEAFYANRPWREHFLSGLIR MKRCRETTVTSTVVDSDGIPTRVTRTVTSCWYEYR
Sequences:
>Translated_275_residues MLKLIFTLLFLFFSGVANAYPRCFDEPCISYDKGTVSYQIDDTLADGTPVKISSEIEVSFKVSLYRGEIVNQPTLVKPID TTITIVCEDDIDCDSMDGLNRHAGERLVFYNDYLREKPFLDLVAAKHFVYQAGKTALFTTTNSLSTSRRELLSALAKNFV DNLITQAGSPIIYIQLKGENGLVLHLKLELSNDYWKIADTAEEGLRNELNQLTIQFNQSEYEAFYANRPWREHFLSGLIR MKRCRETTVTSTVVDSDGIPTRVTRTVTSCWYEYR >Mature_275_residues MLKLIFTLLFLFFSGVANAYPRCFDEPCISYDKGTVSYQIDDTLADGTPVKISSEIEVSFKVSLYRGEIVNQPTLVKPID TTITIVCEDDIDCDSMDGLNRHAGERLVFYNDYLREKPFLDLVAAKHFVYQAGKTALFTTTNSLSTSRRELLSALAKNFV DNLITQAGSPIIYIQLKGENGLVLHLKLELSNDYWKIADTAEEGLRNELNQLTIQFNQSEYEAFYANRPWREHFLSGLIR MKRCRETTVTSTVVDSDGIPTRVTRTVTSCWYEYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31368; Mature: 31368
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLIFTLLFLFFSGVANAYPRCFDEPCISYDKGTVSYQIDDTLADGTPVKISSEIEVSF CHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEECEEEEEE KVSLYRGEIVNQPTLVKPIDTTITIVCEDDIDCDSMDGLNRHAGERLVFYNDYLREKPFL EEEEEECCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCHHCCCEEEEEHHHHCCCCHH DLVAAKHFVYQAGKTALFTTTNSLSTSRRELLSALAKNFVDNLITQAGSPIIYIQLKGEN HHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC GLVLHLKLELSNDYWKIADTAEEGLRNELNQLTIQFNQSEYEAFYANRPWREHFLSGLIR CEEEEEEEEECCCEEEEHHHHHHHHHHHHHHEEEEECCCHHEEEECCCCHHHHHHHHHHH MKRCRETTVTSTVVDSDGIPTRVTRTVTSCWYEYR HHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MLKLIFTLLFLFFSGVANAYPRCFDEPCISYDKGTVSYQIDDTLADGTPVKISSEIEVSF CHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEECEEEEEE KVSLYRGEIVNQPTLVKPIDTTITIVCEDDIDCDSMDGLNRHAGERLVFYNDYLREKPFL EEEEEECCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCHHCCCEEEEEHHHHCCCCHH DLVAAKHFVYQAGKTALFTTTNSLSTSRRELLSALAKNFVDNLITQAGSPIIYIQLKGEN HHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC GLVLHLKLELSNDYWKIADTAEEGLRNELNQLTIQFNQSEYEAFYANRPWREHFLSGLIR CEEEEEEEEECCCEEEEHHHHHHHHHHHHHHEEEEECCCHHEEEECCCCHHHHHHHHHHH MKRCRETTVTSTVVDSDGIPTRVTRTVTSCWYEYR HHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA