| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is gltT [H]
Identifier: 157960603
GI number: 157960603
Start: 960429
End: 961727
Strand: Direct
Name: gltT [H]
Synonym: Spea_0775
Alternate gene names: 157960603
Gene position: 960429-961727 (Clockwise)
Preceding gene: 157960602
Following gene: 157960605
Centisome position: 18.56
GC content: 46.11
Gene sequence:
>1299_bases ATGTCGAATCAACAACCTTCACTTCTGAAAAAAGTGTGGTCTAGCTGGATGTCTGTGCCACTTTGGCTACAGATCATGAT TGGTATGCTGTTAGGTATTTTAACCGGGGTTAGCTTGGGTGAACAGGCGACCTACTTGAAGCCAATTGGTACTCTATTTG TTAATACTATCAAAATGTTGATTGTACCATTAGTGTTCTGCTCCCTAATTGTCGGCGTAACTTCTATGCAAGATACCGCC AAGATGGGACGCATTGGTTTCAAGTCGTTCGCTTTCTACTTAGGCACAACCTCTATCGCAATCACGCTAGGTTTAGCCGT TGGCCACATTATGCAGCCGGGCACGGGCCTTGACATGGTAGCTCATGAAACAGCTGAAGTGGTCAAGCAAGCGCCGTCAA TCATGCAGACCTTGATTGATATCGTGCCAACTAACCCGATTGCAGCGCTTGCTAGTGGCCAGATTTTACAGGTGATTGTG TTTGCAGTTGCGCTGGGTATTGCTTTAGTACTGATTGGTGAACATGGTAAGCCTGCTATCAAGGTGTTCGAAAGCCTAGC CGAAGCCATGTATAAGCTGACTGACTTAGTAATGAAGTTTGCACCATACGGCGTATTTGGCCTGATGGCATGGGTTGCTG GCGAGTATGGTGTCGACATGTTGATGCCGTTAATAAAGGTTATTATCGCTGTTTATATTGGCTGTTTCCTGCATGTTGTT GGCTTCTATAGCTTCGTTTTAGTGGTATTCGCTAAGCTTAACCCTATTCAATTCTTTAAAGGCATTAGTAATGCGATTGC GGTGGCTTATACTACTTCGAGCTCTGCGGGTACGCTGCCAGCGAGTATGAAGTGTGCCAGTGAGTACTTAGGCGTTAATA AGAAGATCTCAAGCTTCGTATTGCCATTAGGTACCACCATCAACATGGATGGTACCGCGCTTTATCAAGGTGTTACGGCA TTGTTTGTGGCACAAGCTTTCGGTATCGATCTGACTTGGGTCGATTACATCACTATCATCTTGACTGCAACGCTAGCCTC TATTGGTACAGCGGGTGTGCCGGGTGCGGGTCTTGTGATGTTGACGCTAGTATTGACCACTGTGGGTCTACCACTTGAAG GCGTTGCCCTTATTGCCGGTATCGACCGAATTTTGGATATGGCGCGTACCGTAGTAAACGTCTCTGGTGACTTAGTAGCC ACCACAGTTATTGCTAAGTCTGAAGGTGAGATTGACGTTGAGCACTACAATGCTAACGCAGAAGACAGTGCAGAAATGGC TGAAAAGCTAAACTCTTAA
Upstream 100 bases:
>100_bases GATCATCTCTCACTATTGCAGCATATGCTAAACTGCCGCGTTATTTTTTAGGCTGGCGACTTGCTGGCTGTCCTTCCTCC CACTATTTCAAGGTCTAAAT
Downstream 100 bases:
>100_bases GCCAAGTGAGCTAAGTTTATGTCCACCGCTAATGGTGGGCCAATAAAAAACCGCCGAAAGGCGGTTTTTTATTTCTGGAA CATTTATGCCGATTTACCAT
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MSNQQPSLLKKVWSSWMSVPLWLQIMIGMLLGILTGVSLGEQATYLKPIGTLFVNTIKMLIVPLVFCSLIVGVTSMQDTA KMGRIGFKSFAFYLGTTSIAITLGLAVGHIMQPGTGLDMVAHETAEVVKQAPSIMQTLIDIVPTNPIAALASGQILQVIV FAVALGIALVLIGEHGKPAIKVFESLAEAMYKLTDLVMKFAPYGVFGLMAWVAGEYGVDMLMPLIKVIIAVYIGCFLHVV GFYSFVLVVFAKLNPIQFFKGISNAIAVAYTTSSSAGTLPASMKCASEYLGVNKKISSFVLPLGTTINMDGTALYQGVTA LFVAQAFGIDLTWVDYITIILTATLASIGTAGVPGAGLVMLTLVLTTVGLPLEGVALIAGIDRILDMARTVVNVSGDLVA TTVIAKSEGEIDVEHYNANAEDSAEMAEKLNS
Sequences:
>Translated_432_residues MSNQQPSLLKKVWSSWMSVPLWLQIMIGMLLGILTGVSLGEQATYLKPIGTLFVNTIKMLIVPLVFCSLIVGVTSMQDTA KMGRIGFKSFAFYLGTTSIAITLGLAVGHIMQPGTGLDMVAHETAEVVKQAPSIMQTLIDIVPTNPIAALASGQILQVIV FAVALGIALVLIGEHGKPAIKVFESLAEAMYKLTDLVMKFAPYGVFGLMAWVAGEYGVDMLMPLIKVIIAVYIGCFLHVV GFYSFVLVVFAKLNPIQFFKGISNAIAVAYTTSSSAGTLPASMKCASEYLGVNKKISSFVLPLGTTINMDGTALYQGVTA LFVAQAFGIDLTWVDYITIILTATLASIGTAGVPGAGLVMLTLVLTTVGLPLEGVALIAGIDRILDMARTVVNVSGDLVA TTVIAKSEGEIDVEHYNANAEDSAEMAEKLNS >Mature_431_residues SNQQPSLLKKVWSSWMSVPLWLQIMIGMLLGILTGVSLGEQATYLKPIGTLFVNTIKMLIVPLVFCSLIVGVTSMQDTAK MGRIGFKSFAFYLGTTSIAITLGLAVGHIMQPGTGLDMVAHETAEVVKQAPSIMQTLIDIVPTNPIAALASGQILQVIVF AVALGIALVLIGEHGKPAIKVFESLAEAMYKLTDLVMKFAPYGVFGLMAWVAGEYGVDMLMPLIKVIIAVYIGCFLHVVG FYSFVLVVFAKLNPIQFFKGISNAIAVAYTTSSSAGTLPASMKCASEYLGVNKKISSFVLPLGTTINMDGTALYQGVTAL FVAQAFGIDLTWVDYITIILTATLASIGTAGVPGAGLVMLTLVLTTVGLPLEGVALIAGIDRILDMARTVVNVSGDLVAT TVIAKSEGEIDVEHYNANAEDSAEMAEKLNS
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=430, Percent_Identity=31.8604651162791, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI40254478, Length=446, Percent_Identity=31.8385650224215, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI169790839, Length=444, Percent_Identity=30.8558558558559, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI66773030, Length=475, Percent_Identity=32, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI5032093, Length=375, Percent_Identity=35.7333333333333, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI4827012, Length=302, Percent_Identity=36.7549668874172, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI223468564, Length=250, Percent_Identity=40.4, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI223468566, Length=250, Percent_Identity=40.4, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI194239697, Length=255, Percent_Identity=39.2156862745098, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI262359914, Length=378, Percent_Identity=27.7777777777778, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI301601644, Length=197, Percent_Identity=36.0406091370558, Blast_Score=127, Evalue=2e-29, Organism=Escherichia coli, GI1790514, Length=411, Percent_Identity=38.9294403892944, Blast_Score=275, Evalue=5e-75, Organism=Escherichia coli, GI1789947, Length=415, Percent_Identity=35.9036144578313, Blast_Score=240, Evalue=1e-64, Organism=Escherichia coli, GI1788024, Length=412, Percent_Identity=28.1553398058252, Blast_Score=142, Evalue=4e-35, Organism=Escherichia coli, GI1789473, Length=376, Percent_Identity=26.8617021276596, Blast_Score=99, Evalue=8e-22, Organism=Caenorhabditis elegans, GI71996953, Length=469, Percent_Identity=35.181236673774, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI71983099, Length=474, Percent_Identity=33.1223628691983, Blast_Score=215, Evalue=5e-56, Organism=Caenorhabditis elegans, GI71983106, Length=468, Percent_Identity=33.3333333333333, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17537407, Length=458, Percent_Identity=32.3144104803493, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI193206505, Length=460, Percent_Identity=31.0869565217391, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI193206654, Length=427, Percent_Identity=30.4449648711944, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17541374, Length=392, Percent_Identity=29.3367346938776, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI24583025, Length=446, Percent_Identity=30.4932735426009, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI17137668, Length=446, Percent_Identity=30.4932735426009, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI24583023, Length=446, Percent_Identity=30.4932735426009, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI281360481, Length=461, Percent_Identity=29.0672451193059, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI281360483, Length=461, Percent_Identity=29.0672451193059, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI17137666, Length=461, Percent_Identity=29.0672451193059, Blast_Score=145, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 45742; Mature: 45611
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS00714 NA_DICARBOXYL_SYMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQQPSLLKKVWSSWMSVPLWLQIMIGMLLGILTGVSLGEQATYLKPIGTLFVNTIKML CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH IVPLVFCSLIVGVTSMQDTAKMGRIGFKSFAFYLGTTSIAITLGLAVGHIMQPGTGLDMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AHETAEVVKQAPSIMQTLIDIVPTNPIAALASGQILQVIVFAVALGIALVLIGEHGKPAI HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHH KVFESLAEAMYKLTDLVMKFAPYGVFGLMAWVAGEYGVDMLMPLIKVIIAVYIGCFLHVV HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GFYSFVLVVFAKLNPIQFFKGISNAIAVAYTTSSSAGTLPASMKCASEYLGVNKKISSFV HHHHHHHHHHHHCCHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHH LPLGTTINMDGTALYQGVTALFVAQAFGIDLTWVDYITIILTATLASIGTAGVPGAGLVM HCCCCEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LTLVLTTVGLPLEGVALIAGIDRILDMARTVVNVSGDLVATTVIAKSEGEIDVEHYNANA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCCEEEEECCCCC EDSAEMAEKLNS CHHHHHHHHHCC >Mature Secondary Structure SNQQPSLLKKVWSSWMSVPLWLQIMIGMLLGILTGVSLGEQATYLKPIGTLFVNTIKML CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH IVPLVFCSLIVGVTSMQDTAKMGRIGFKSFAFYLGTTSIAITLGLAVGHIMQPGTGLDMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AHETAEVVKQAPSIMQTLIDIVPTNPIAALASGQILQVIVFAVALGIALVLIGEHGKPAI HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHH KVFESLAEAMYKLTDLVMKFAPYGVFGLMAWVAGEYGVDMLMPLIKVIIAVYIGCFLHVV HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GFYSFVLVVFAKLNPIQFFKGISNAIAVAYTTSSSAGTLPASMKCASEYLGVNKKISSFV HHHHHHHHHHHHCCHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHH LPLGTTINMDGTALYQGVTALFVAQAFGIDLTWVDYITIILTATLASIGTAGVPGAGLVM HCCCCEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LTLVLTTVGLPLEGVALIAGIDRILDMARTVVNVSGDLVATTVIAKSEGEIDVEHYNANA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCCEEEEECCCCC EDSAEMAEKLNS CHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]