| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960558
Identifier: 157960558
GI number: 157960558
Start: 905386
End: 905985
Strand: Direct
Name: 157960558
Synonym: Spea_0730
Alternate gene names: NA
Gene position: 905386-905985 (Clockwise)
Preceding gene: 157960557
Following gene: 157960560
Centisome position: 17.5
GC content: 38.67
Gene sequence:
>600_bases ATGGAGAAAAAGAACAAGCTATCTGTAGACGAAATCGTAGAATCGATGCTCTCATCAGTTTGTGAAACATCGAACTCAGA GCGCGTTTGGCGTGTGTTGATTGACCCTGTGATGCATCTAGAATTTAAAACGCAGTTCAATATGTATAGTTCGTTTATGC TTACGACTAGTCGTAGCACTTTTGCAACGTTATTAATGGGTTTGTCTAGAATTTCAGATGATCAGAATAATTCTATGAGT ATTCCAAAGTTACTAGAACTAGCCGAATCGGACTCAAACTCAGTCGAGATAGAAGAATTGAGGCATAAGTACTCGGATCT CAACAAAACATGGCAAAGCCTTAAACACATTAGACATAATGTGTACGCGCATATTAGCGCGAATACGACAGAGTTTAGCG CATTTGAGAGAGCTGGAGTGACTCCTAACGATCTTACTGAAGCTGCTAATGTGACGAAAGAAATTGTATTGTCAGTATAT GACTTACTAGGTTATGACTCTGCGCCTTATAAAAATTTACACGTAGATGCAAAGCTAGATCTTCAAAAGCTATTTCGTAA TTTAAAAGCAGGAAGAGATGTTAGGCTCAGTGGAGCATAA
Upstream 100 bases:
>100_bases CTATTAACAGAATCTTTGTTCGGGAAATAGGCAAAGGCATAACAAGCGCCTGCAATCTGGCCTCCGGCGGTTGAGGTGGC GTTATGCTTCTGGAGAGGAA
Downstream 100 bases:
>100_bases GCATAACAAACGACTATGGCGTCAATAGCTAGTTTTAAATACTTAGATATGTCGGGTCAGAGTAAACATTCAAATACCTG AATCTAACTTCCCCTACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MEKKNKLSVDEIVESMLSSVCETSNSERVWRVLIDPVMHLEFKTQFNMYSSFMLTTSRSTFATLLMGLSRISDDQNNSMS IPKLLELAESDSNSVEIEELRHKYSDLNKTWQSLKHIRHNVYAHISANTTEFSAFERAGVTPNDLTEAANVTKEIVLSVY DLLGYDSAPYKNLHVDAKLDLQKLFRNLKAGRDVRLSGA
Sequences:
>Translated_199_residues MEKKNKLSVDEIVESMLSSVCETSNSERVWRVLIDPVMHLEFKTQFNMYSSFMLTTSRSTFATLLMGLSRISDDQNNSMS IPKLLELAESDSNSVEIEELRHKYSDLNKTWQSLKHIRHNVYAHISANTTEFSAFERAGVTPNDLTEAANVTKEIVLSVY DLLGYDSAPYKNLHVDAKLDLQKLFRNLKAGRDVRLSGA >Mature_199_residues MEKKNKLSVDEIVESMLSSVCETSNSERVWRVLIDPVMHLEFKTQFNMYSSFMLTTSRSTFATLLMGLSRISDDQNNSMS IPKLLELAESDSNSVEIEELRHKYSDLNKTWQSLKHIRHNVYAHISANTTEFSAFERAGVTPNDLTEAANVTKEIVLSVY DLLGYDSAPYKNLHVDAKLDLQKLFRNLKAGRDVRLSGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22625; Mature: 22625
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKKNKLSVDEIVESMLSSVCETSNSERVWRVLIDPVMHLEFKTQFNMYSSFMLTTSRST CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FATLLMGLSRISDDQNNSMSIPKLLELAESDSNSVEIEELRHKYSDLNKTWQSLKHIRHN HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VYAHISANTTEFSAFERAGVTPNDLTEAANVTKEIVLSVYDLLGYDSAPYKNLHVDAKLD HEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHH LQKLFRNLKAGRDVRLSGA HHHHHHHHHCCCCEEECCC >Mature Secondary Structure MEKKNKLSVDEIVESMLSSVCETSNSERVWRVLIDPVMHLEFKTQFNMYSSFMLTTSRST CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH FATLLMGLSRISDDQNNSMSIPKLLELAESDSNSVEIEELRHKYSDLNKTWQSLKHIRHN HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VYAHISANTTEFSAFERAGVTPNDLTEAANVTKEIVLSVYDLLGYDSAPYKNLHVDAKLD HEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHH LQKLFRNLKAGRDVRLSGA HHHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA