| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is gltP [H]
Identifier: 157960547
GI number: 157960547
Start: 888179
End: 889435
Strand: Direct
Name: gltP [H]
Synonym: Spea_0719
Alternate gene names: 157960547
Gene position: 888179-889435 (Clockwise)
Preceding gene: 157960546
Following gene: 157960550
Centisome position: 17.16
GC content: 49.32
Gene sequence:
>1257_bases ATGACTAAATCACTTTCTACACGGATCTTTATCGGTCTGTTTTCTGGGCTTATTTTTGGCTCAATCATTCAATACTTCCT CGCAGACATCAGCTTATTTTCTGGCACTATCGTTGAATTAGCCTCGGGCGCAGGCACCATGTTCGTTAATATGATCATGA TGCTAGTGGTGCCACTGGTATTCGTCAGTATCGTATGCGGCGTGTGCGAGCTTAAAGATCTCAATAGCTTCGGTCGCTTA GGCGGCAAAACATTTGGCTTCTATATCATCAACACCTTAGTGGCTATTTTTGCTGCACTAGGCGTGGCGCTACTGCTTTC TCCAGGCAAGGGCGTGGATATGTCTAACGGTGGCGGCGTGGATATCGTGGCCACAGAGCTACCTAATCTGGTCGACTTAG TAGTCAGCATTGTACCGAGTAACCCGATAGCGGCGTTTAGCTCGGGTAACATGCTACAGGTTATCTTTATGGCACTGCTG CTTGGCGGCGTGATTAAGTCTCTTGGTGAAGCGGCGCAGAGCGCGGTAAACGGCTTCCAAGTGGCGAATAAGATCATGAT GAAGCTGATTAGCGTGGTGATGCAGCTAGCGCCTATCGGTGTATTTGCATTAATGCTGAAGCTAGGTGCAACCCTAGAAG CGGCAATATTTGGCAGCGTGGTGGAATACCTAGCACTGATCTTAGGCTTGTTGCTGTTATGGATTTTTGTGGTATACCCA TTCGCGGTTGGCTTATTTACCCAGATTTCGGCGAAAGAGTTCCGCGCTAAGACTCGCGAGCAGATCCTATTTTCACTGTC GACGGCCAGCTCAAATGCAACCATTCCAGTGACTATGCGCACTCTTACCGATAAACTCGGCGTTAATCGCTCGGTTGCAG GCTTTGGTGTGCCACTCGGCGCGACCATGAACATGGGCGGCGTATCGATTTATATCACTATTGCTATCTTCTTTGTGGCC AACGCATTTGGCGCGCCAATCCCTATGGAGCAGCTACCCGCATTACTATTTAGTATCTTCTTACTGTCAGTAGGGGCTGG TGGCGTACCAGGCGGTGGCATGGTGATGATTGGTGTGCTTATCCATCAGATGGGATTACCTGTAGAAGCGTTCGCAATTG TGGCAGCGCTAGACCGCCTCATCGACATGGTGCTGACATCTTGTAACGTTGTAGGTGATACAGCTGTACTAACCATAGTT AATGAAACTGAGAAGAGCAGCGATGCTAAGTTAGCAGCGGCGCCGGCGCAGGCTTAA
Upstream 100 bases:
>100_bases TGTTTCACTATCCCTGCCACAACGAGATGGAAATCAAGTTTTCATCAAAATTGAAGGCAATAGAAGGCATGCGTTAAGAC ATGTCCAATAAGGCAAGCAA
Downstream 100 bases:
>100_bases ACCGCGCTAGAGTCTTTTTAGCTCGCTGTTTTAAAAAGGAAAATGCCAGCAATTTGCTGGCATTTTTGTTTTTAGATTAA ACCGCCGAAGCTGTTATTTT
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MTKSLSTRIFIGLFSGLIFGSIIQYFLADISLFSGTIVELASGAGTMFVNMIMMLVVPLVFVSIVCGVCELKDLNSFGRL GGKTFGFYIINTLVAIFAALGVALLLSPGKGVDMSNGGGVDIVATELPNLVDLVVSIVPSNPIAAFSSGNMLQVIFMALL LGGVIKSLGEAAQSAVNGFQVANKIMMKLISVVMQLAPIGVFALMLKLGATLEAAIFGSVVEYLALILGLLLLWIFVVYP FAVGLFTQISAKEFRAKTREQILFSLSTASSNATIPVTMRTLTDKLGVNRSVAGFGVPLGATMNMGGVSIYITIAIFFVA NAFGAPIPMEQLPALLFSIFLLSVGAGGVPGGGMVMIGVLIHQMGLPVEAFAIVAALDRLIDMVLTSCNVVGDTAVLTIV NETEKSSDAKLAAAPAQA
Sequences:
>Translated_418_residues MTKSLSTRIFIGLFSGLIFGSIIQYFLADISLFSGTIVELASGAGTMFVNMIMMLVVPLVFVSIVCGVCELKDLNSFGRL GGKTFGFYIINTLVAIFAALGVALLLSPGKGVDMSNGGGVDIVATELPNLVDLVVSIVPSNPIAAFSSGNMLQVIFMALL LGGVIKSLGEAAQSAVNGFQVANKIMMKLISVVMQLAPIGVFALMLKLGATLEAAIFGSVVEYLALILGLLLLWIFVVYP FAVGLFTQISAKEFRAKTREQILFSLSTASSNATIPVTMRTLTDKLGVNRSVAGFGVPLGATMNMGGVSIYITIAIFFVA NAFGAPIPMEQLPALLFSIFLLSVGAGGVPGGGMVMIGVLIHQMGLPVEAFAIVAALDRLIDMVLTSCNVVGDTAVLTIV NETEKSSDAKLAAAPAQA >Mature_417_residues TKSLSTRIFIGLFSGLIFGSIIQYFLADISLFSGTIVELASGAGTMFVNMIMMLVVPLVFVSIVCGVCELKDLNSFGRLG GKTFGFYIINTLVAIFAALGVALLLSPGKGVDMSNGGGVDIVATELPNLVDLVVSIVPSNPIAAFSSGNMLQVIFMALLL GGVIKSLGEAAQSAVNGFQVANKIMMKLISVVMQLAPIGVFALMLKLGATLEAAIFGSVVEYLALILGLLLLWIFVVYPF AVGLFTQISAKEFRAKTREQILFSLSTASSNATIPVTMRTLTDKLGVNRSVAGFGVPLGATMNMGGVSIYITIAIFFVAN AFGAPIPMEQLPALLFSIFLLSVGAGGVPGGGMVMIGVLIHQMGLPVEAFAIVAALDRLIDMVLTSCNVVGDTAVLTIVN ETEKSSDAKLAAAPAQA
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=431, Percent_Identity=27.3781902552204, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI40254478, Length=452, Percent_Identity=26.9911504424779, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI169790839, Length=436, Percent_Identity=25, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI66773030, Length=400, Percent_Identity=26, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI5032093, Length=395, Percent_Identity=27.5949367088608, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI4827012, Length=272, Percent_Identity=29.7794117647059, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI223468564, Length=270, Percent_Identity=27.4074074074074, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI194239697, Length=289, Percent_Identity=27.681660899654, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI223468566, Length=270, Percent_Identity=27.4074074074074, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI262359914, Length=365, Percent_Identity=26.027397260274, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI301601644, Length=151, Percent_Identity=31.1258278145695, Blast_Score=83, Evalue=5e-16, Organism=Escherichia coli, GI1790514, Length=427, Percent_Identity=30.6791569086651, Blast_Score=177, Evalue=8e-46, Organism=Escherichia coli, GI1789947, Length=419, Percent_Identity=27.6849642004773, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI1788024, Length=422, Percent_Identity=31.042654028436, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1789473, Length=291, Percent_Identity=32.6460481099656, Blast_Score=103, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71983099, Length=450, Percent_Identity=27.5555555555556, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI71983106, Length=450, Percent_Identity=27.5555555555556, Blast_Score=152, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17537407, Length=421, Percent_Identity=28.2660332541568, Blast_Score=138, Evalue=7e-33, Organism=Caenorhabditis elegans, GI193206505, Length=424, Percent_Identity=25.4716981132075, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71996953, Length=419, Percent_Identity=27.9236276849642, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17541374, Length=418, Percent_Identity=24.8803827751196, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI193206654, Length=403, Percent_Identity=26.5508684863524, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24583025, Length=446, Percent_Identity=26.0089686098655, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI17137668, Length=446, Percent_Identity=26.0089686098655, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24583023, Length=446, Percent_Identity=26.0089686098655, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI281360483, Length=464, Percent_Identity=24.5689655172414, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI17137666, Length=464, Percent_Identity=24.5689655172414, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI281360481, Length=463, Percent_Identity=24.622030237581, Blast_Score=89, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43567; Mature: 43436
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSLSTRIFIGLFSGLIFGSIIQYFLADISLFSGTIVELASGAGTMFVNMIMMLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FVSIVCGVCELKDLNSFGRLGGKTFGFYIINTLVAIFAALGVALLLSPGKGVDMSNGGGV HHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DIVATELPNLVDLVVSIVPSNPIAAFSSGNMLQVIFMALLLGGVIKSLGEAAQSAVNGFQ EEEHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VANKIMMKLISVVMQLAPIGVFALMLKLGATLEAAIFGSVVEYLALILGLLLLWIFVVYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVGLFTQISAKEFRAKTREQILFSLSTASSNATIPVTMRTLTDKLGVNRSVAGFGVPLG HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCC ATMNMGGVSIYITIAIFFVANAFGAPIPMEQLPALLFSIFLLSVGAGGVPGGGMVMIGVL CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IHQMGLPVEAFAIVAALDRLIDMVLTSCNVVGDTAVLTIVNETEKSSDAKLAAAPAQA HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEECCCCCCC >Mature Secondary Structure TKSLSTRIFIGLFSGLIFGSIIQYFLADISLFSGTIVELASGAGTMFVNMIMMLVVPLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FVSIVCGVCELKDLNSFGRLGGKTFGFYIINTLVAIFAALGVALLLSPGKGVDMSNGGGV HHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DIVATELPNLVDLVVSIVPSNPIAAFSSGNMLQVIFMALLLGGVIKSLGEAAQSAVNGFQ EEEHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VANKIMMKLISVVMQLAPIGVFALMLKLGATLEAAIFGSVVEYLALILGLLLLWIFVVYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVGLFTQISAKEFRAKTREQILFSLSTASSNATIPVTMRTLTDKLGVNRSVAGFGVPLG HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCC ATMNMGGVSIYITIAIFFVANAFGAPIPMEQLPALLFSIFLLSVGAGGVPGGGMVMIGVL CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IHQMGLPVEAFAIVAALDRLIDMVLTSCNVVGDTAVLTIVNETEKSSDAKLAAAPAQA HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]