| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960498
Identifier: 157960498
GI number: 157960498
Start: 829855
End: 831264
Strand: Direct
Name: 157960498
Synonym: Spea_0670
Alternate gene names: NA
Gene position: 829855-831264 (Clockwise)
Preceding gene: 157960495
Following gene: 157960499
Centisome position: 16.04
GC content: 48.58
Gene sequence:
>1410_bases ATGAAATCTATTTCCAAGCATGCCAAGTTGAACATGTTAGCGATGACTATCGCCAGTGTGTTTAGCGCCAATGCCATGTC CGCGACCAATCCAGAAGCATTAGCCGATGCGATTGCCAAACAAGAGGCTGAGCTCACAGCATTAAAGAGCCAGTTACAAC AGTTAGCGCAGCAGCAAAAGCAGCAACAATTGCAATCTCAGCAAAAAGAAGCAGAGCAACAGCAAGCATTACAAGTGGCT AGCGAAGCGAAGTCGAGCGCTTGGGATAAGTTTTCATTTAAGTCCTACGGCAGCGTGATTTATACCAGTGACGAGTATTA CGACAATGTGCAGGACACCTCTCCTGAGCGTCGTAGCCGTTTCGATCTTGAGCGCATCGTGACTGAGTTTGGTTATCAGT TTAATGAGCAATGGGACATGGAAGTTGAAATCGAGTATGAGCATGGCGGTACAGGCACTGCGCTAGAATATGACGGTTTC GATGAGTTCGGCGAGTTTGAAGCAGAGGTCGAAGCGGGCGGCGAAGTGATGATCGAAAAGGCGCAGATCCGCTACCGTCC AAGCGAAGCCTTCGGGGTTAAATTCGGTAATATCCATCTGCCAGTCGGCCTTAGCAGTACCTTGCATAAACCTAGTCAAT ATCTAACAGTGCAACGCCATAAGAGTGAAGTGGCGATGCTACCGGCTGTTTGGAATGAGAATGGTATAGGTATCTTTGGT GAAGTCGAGAACTTCCATTATCAGGCACAAGTGGTTAGCGGTTTAAACTCTGAATACTTCCGCACCTATGACTGGGTGGC TTCAGGCCATCAGAAGCGTTTTGAGCATGTGAATGCTGACGATCTCGCCTATGTGGTGCGCCTCGATTACGGTAACTTCA AGAAAGGCTCAGCAATTGGTGCTTCCTATTACTATGGCAACACCAGTGGTAACCGCCATAAGACTAACAAGCTAAGTGCC GACGGCACGGTTGAGATCTTATCGGTTGCTGCCGCCTTTGTTGAAGGACCTTGGATCCTACGCGGTCAGTACCTATATGG CACGCTGAGTGATAGCGACGCCATCACTCAAGCTAACAAAACCACCCCCGGGCTTAAGCCGGGTAACTTCGCCCAATTGG GGGCAAAGTCAGAAGCCTTCTTTGTTGAAGCAGGGGTCGATCTAGGCCAGTTCACATCCGTGCCCATTACTGTGTTTGCC AATATCGATTATTCAAACCCACTGAAAGAGGTGGAAACCGGTACAGCGACAAAACGCTATGAAAATACTTGGATTAGCGC CGGTGTTAACTACTTCCCCATTCCTGAAATTGTGATTAAGGCCGAGGCGGGCGTACAGCAAGTCGCGGTTGCATCCATTC CCGATACTAACTTTTTCGCATTAGGCGTTGGTTACCAGTTCTCAATTTAA
Upstream 100 bases:
>100_bases TAATGTAAATCATTCTCATTTGGGTTACTTTGTCCGCGAATTTAGGGGGAGCGGTCAATATCTAACTATTGCCTGCGCAG AATCAAAATGAGAGCCGTGT
Downstream 100 bases:
>100_bases TTTAATGACTTAATACATGGAGTTTTCAATGAAACATTTTACTCAATCAGTGGTAGCCATCGCGCTTATTTCTGCACTTG CTGGCTGTGGCGGTTCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MKSISKHAKLNMLAMTIASVFSANAMSATNPEALADAIAKQEAELTALKSQLQQLAQQQKQQQLQSQQKEAEQQQALQVA SEAKSSAWDKFSFKSYGSVIYTSDEYYDNVQDTSPERRSRFDLERIVTEFGYQFNEQWDMEVEIEYEHGGTGTALEYDGF DEFGEFEAEVEAGGEVMIEKAQIRYRPSEAFGVKFGNIHLPVGLSSTLHKPSQYLTVQRHKSEVAMLPAVWNENGIGIFG EVENFHYQAQVVSGLNSEYFRTYDWVASGHQKRFEHVNADDLAYVVRLDYGNFKKGSAIGASYYYGNTSGNRHKTNKLSA DGTVEILSVAAAFVEGPWILRGQYLYGTLSDSDAITQANKTTPGLKPGNFAQLGAKSEAFFVEAGVDLGQFTSVPITVFA NIDYSNPLKEVETGTATKRYENTWISAGVNYFPIPEIVIKAEAGVQQVAVASIPDTNFFALGVGYQFSI
Sequences:
>Translated_469_residues MKSISKHAKLNMLAMTIASVFSANAMSATNPEALADAIAKQEAELTALKSQLQQLAQQQKQQQLQSQQKEAEQQQALQVA SEAKSSAWDKFSFKSYGSVIYTSDEYYDNVQDTSPERRSRFDLERIVTEFGYQFNEQWDMEVEIEYEHGGTGTALEYDGF DEFGEFEAEVEAGGEVMIEKAQIRYRPSEAFGVKFGNIHLPVGLSSTLHKPSQYLTVQRHKSEVAMLPAVWNENGIGIFG EVENFHYQAQVVSGLNSEYFRTYDWVASGHQKRFEHVNADDLAYVVRLDYGNFKKGSAIGASYYYGNTSGNRHKTNKLSA DGTVEILSVAAAFVEGPWILRGQYLYGTLSDSDAITQANKTTPGLKPGNFAQLGAKSEAFFVEAGVDLGQFTSVPITVFA NIDYSNPLKEVETGTATKRYENTWISAGVNYFPIPEIVIKAEAGVQQVAVASIPDTNFFALGVGYQFSI >Mature_469_residues MKSISKHAKLNMLAMTIASVFSANAMSATNPEALADAIAKQEAELTALKSQLQQLAQQQKQQQLQSQQKEAEQQQALQVA SEAKSSAWDKFSFKSYGSVIYTSDEYYDNVQDTSPERRSRFDLERIVTEFGYQFNEQWDMEVEIEYEHGGTGTALEYDGF DEFGEFEAEVEAGGEVMIEKAQIRYRPSEAFGVKFGNIHLPVGLSSTLHKPSQYLTVQRHKSEVAMLPAVWNENGIGIFG EVENFHYQAQVVSGLNSEYFRTYDWVASGHQKRFEHVNADDLAYVVRLDYGNFKKGSAIGASYYYGNTSGNRHKTNKLSA DGTVEILSVAAAFVEGPWILRGQYLYGTLSDSDAITQANKTTPGLKPGNFAQLGAKSEAFFVEAGVDLGQFTSVPITVFA NIDYSNPLKEVETGTATKRYENTWISAGVNYFPIPEIVIKAEAGVQQVAVASIPDTNFFALGVGYQFSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51964; Mature: 51964
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSISKHAKLNMLAMTIASVFSANAMSATNPEALADAIAKQEAELTALKSQLQQLAQQQK CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQLQSQQKEAEQQQALQVASEAKSSAWDKFSFKSYGSVIYTSDEYYDNVQDTSPERRSR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEECHHHHCCCCCCCCHHHHH FDLERIVTEFGYQFNEQWDMEVEIEYEHGGTGTALEYDGFDEFGEFEAEVEAGGEVMIEK HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCHHHCCCCCEEEEEE AQIRYRPSEAFGVKFGNIHLPVGLSSTLHKPSQYLTVQRHKSEVAMLPAVWNENGIGIFG EEEEECCCHHHEEEECCEEEECCCCHHHCCCHHHEEEEECCCCEEEEEEEECCCCCEEEE EVENFHYQAQVVSGLNSEYFRTYDWVASGHQKRFEHVNADDLAYVVRLDYGNFKKGSAIG ECCCCEEHHHHHHCCCHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCE ASYYYGNTSGNRHKTNKLSADGTVEILSVAAAFVEGPWILRGQYLYGTLSDSDAITQANK EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHCCCC TTPGLKPGNFAQLGAKSEAFFVEAGVDLGQFTSVPITVFANIDYSNPLKEVETGTATKRY CCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCHHHH ENTWISAGVNYFPIPEIVIKAEAGVQQVAVASIPDTNFFALGVGYQFSI CCCCEECCCCCCCCCCEEEEECCCHHHEEEEECCCCCEEEEECCEEECC >Mature Secondary Structure MKSISKHAKLNMLAMTIASVFSANAMSATNPEALADAIAKQEAELTALKSQLQQLAQQQK CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQQLQSQQKEAEQQQALQVASEAKSSAWDKFSFKSYGSVIYTSDEYYDNVQDTSPERRSR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEEECHHHHCCCCCCCCHHHHH FDLERIVTEFGYQFNEQWDMEVEIEYEHGGTGTALEYDGFDEFGEFEAEVEAGGEVMIEK HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCHHHCCCCCEEEEEE AQIRYRPSEAFGVKFGNIHLPVGLSSTLHKPSQYLTVQRHKSEVAMLPAVWNENGIGIFG EEEEECCCHHHEEEECCEEEECCCCHHHCCCHHHEEEEECCCCEEEEEEEECCCCCEEEE EVENFHYQAQVVSGLNSEYFRTYDWVASGHQKRFEHVNADDLAYVVRLDYGNFKKGSAIG ECCCCEEHHHHHHCCCHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCE ASYYYGNTSGNRHKTNKLSADGTVEILSVAAAFVEGPWILRGQYLYGTLSDSDAITQANK EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHCCCC TTPGLKPGNFAQLGAKSEAFFVEAGVDLGQFTSVPITVFANIDYSNPLKEVETGTATKRY CCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCHHHH ENTWISAGVNYFPIPEIVIKAEAGVQQVAVASIPDTNFFALGVGYQFSI CCCCEECCCCCCCCCCEEEEECCCHHHEEEEECCCCCEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]