Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960392

Identifier: 157960392

GI number: 157960392

Start: 691591

End: 691971

Strand: Direct

Name: 157960392

Synonym: Spea_0563

Alternate gene names: NA

Gene position: 691591-691971 (Clockwise)

Preceding gene: 157960391

Following gene: 157960393

Centisome position: 13.37

GC content: 40.42

Gene sequence:

>381_bases
ATGGATAATCAATTAAAGTTTATCGTTTTAACTGCAGCTTTGATGGGAATGACGGCCTGTCAGGGAGTGAGATTTAATAC
CAATTTAACGCCAGAATTTGTTGTAGATAAATATCAAACCAGTCAGATTGTCGAATACAGTGCAGAAGAGGTCTATAACC
ATGATTCCCAGATGATAGGTGACGTGAGCGCCGCTTATTGTCAAACGCTCAATACTCCGCCTCCTATCTATTCTAGTATT
ATAGAAACATTAAAGTATAAGGTGCACAAAATGGGTGGTAACGGCATTGTGGTGATGGAGTGCTTAAAGGATAACCCTTA
TGCATCTTGTATCGCTCACCTAGAGTGTCGAGCACTCGCCTATGAGGTGAATTTTTCTTAG

Upstream 100 bases:

>100_bases
TGTTTTAGAGAGGCATCCAGAAGGCTGTGTATGCAGGAGCTTGAGTAACTATCGCTAAGTAGGTAGTCTAAATAGGAAGC
ATTTTATACAGGGTTTGATT

Downstream 100 bases:

>100_bases
TTAGGTTGTTATACTTTGCCTAGTCGTTGTGAGTATATATGAGTCCAATTTACCTATGAATGATAAAGAGCTGTCATTGT
TATCTGAGCGGGAAAGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MDNQLKFIVLTAALMGMTACQGVRFNTNLTPEFVVDKYQTSQIVEYSAEEVYNHDSQMIGDVSAAYCQTLNTPPPIYSSI
IETLKYKVHKMGGNGIVVMECLKDNPYASCIAHLECRALAYEVNFS

Sequences:

>Translated_126_residues
MDNQLKFIVLTAALMGMTACQGVRFNTNLTPEFVVDKYQTSQIVEYSAEEVYNHDSQMIGDVSAAYCQTLNTPPPIYSSI
IETLKYKVHKMGGNGIVVMECLKDNPYASCIAHLECRALAYEVNFS
>Mature_126_residues
MDNQLKFIVLTAALMGMTACQGVRFNTNLTPEFVVDKYQTSQIVEYSAEEVYNHDSQMIGDVSAAYCQTLNTPPPIYSSI
IETLKYKVHKMGGNGIVVMECLKDNPYASCIAHLECRALAYEVNFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14056; Mature: 14056

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNQLKFIVLTAALMGMTACQGVRFNTNLTPEFVVDKYQTSQIVEYSAEEVYNHDSQMIG
CCCCHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHCCHHHHHHHHHHHHHHHCCCHHHHH
DVSAAYCQTLNTPPPIYSSIIETLKYKVHKMGGNGIVVMECLKDNPYASCIAHLECRALA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHEEEE
YEVNFS
EEECCC
>Mature Secondary Structure
MDNQLKFIVLTAALMGMTACQGVRFNTNLTPEFVVDKYQTSQIVEYSAEEVYNHDSQMIG
CCCCHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHCCHHHHHHHHHHHHHHHCCCHHHHH
DVSAAYCQTLNTPPPIYSSIIETLKYKVHKMGGNGIVVMECLKDNPYASCIAHLECRALA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHEEEE
YEVNFS
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA