Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is yegM [C]

Identifier: 157960369

GI number: 157960369

Start: 661959

End: 663338

Strand: Direct

Name: yegM [C]

Synonym: Spea_0540

Alternate gene names: 157960369

Gene position: 661959-663338 (Clockwise)

Preceding gene: 157960368

Following gene: 157960370

Centisome position: 12.79

GC content: 50.51

Gene sequence:

>1380_bases
ATGAAAACGAACAATAAAGAAACGGTACAAACAATGATGCTTAATAACGGCACGGCTAAATCTCGCTTATTCGATCTTAA
TGCGATCACTCGCGCCATGAGCTTCGGCTTCTTTATGAGCCTCACCACGGCATTTGTGTTGCCAACGGTAGCAACCGCTG
GCGATGGCCACGATCACGATGCAGAAGAGATCGTATTGATTAAAACACAAGACGATGGTCATGATCATAACGCCGAAGAA
GCTAAAGCGCACGATGACAGCCATGAACATAAGGCTGAAGAAGCCAAGGCACACGATGATGACCATGCTCATGATGCCGA
AGAGGTGAAGGCAAAAGATGACGGACACGGCCATGGTGAGGAAGAAGCGGAAGAGGAGGCCCACGGTATCGAGCTGACTG
CCGCGCAATTAGCATTGGCTAAAATTGATGTGGCTCAGCTTAGTGAGCAGACTTTCAGTCTAGAAGATGTGGCGACAGCA
ACCATAGTGGTGGATAGGGACAGAACTGTAACTATCGCGCCTCAGGTGGATGTACGCGTGCTAAAAAGAAATGTGGTTCC
GGGCCAAGAAGTGGCTCAGGGTGATGTATTGCTAACCCTTGGCGGGGTTGCGGTTGCTCAGGCACAAGCCGATTATATCA
ATGCCGCAGCTGAGTGGAGTCGAGTAAAGCGTATGAGCGCCAGTGCGGTGAGTGCTAGCCGTCGTTTACAGGCGCAGGTG
GATGCTGAGCTTAAGCGTGCCATTCTAGAAGCGATGAAGATGACACCAGCACAGATCAAGGCGCTGGCTAATGCCCCTGA
AACTATCGGTAGCTATCAGCTAATCGCACCGATTAACGGTCGTGTGCAGCAAGATATCGCGCTATTAGGTCAAATCGTAC
CTGCAGGTACGGCGCTGATGCAGCTAACCGATGAGTCACATCTTTGGGTGGAAGCAGAATTAACACCGACTCAAGCCGAG
AAAGTCAGCCTAGGCAGTAAAACCGTGGTTAAAGTGGGTGACAAGAGCATGGAAGGCACCATTATCGGTCGTTCACATGA
GCTTGATAGCGTGACGCGTACCGAGCAGATCTTAGTGGCGTTTGAAAACGCAGGTCATGTGCTACACGCCGGCCAATTCG
CTGAACTTTACCTACCAGATGCCTCTCAAGGTGGGGTGATCCTACCTGATTCGGCGTTGACTCGTAGCAGCGATGGTCAT
TGGCAGGTATTTATCGAAGGCGCTGAGGGCTTCGAAGCATTAGAGGTTGAAGTGGTTGAACGTCAGCGCGGCATGAACTT
AGTTCGTGGCTTAACGAAAGACATCAAGGTTGTTGTCTCTGGGGCATTTTTCCTAGCCTCTGAGCAGGCTAAATCTGGTT
TCGACATCCACAATCACTAA

Upstream 100 bases:

>100_bases
AGCTGGATGGGGGCAAGTGGACAATTGGAAGGCTATCTCAATAGTCAATTATCGACTCAGGGCGGCTCGGCTGCTGGACA
GGTAAATTAGGGCTTTGATT

Downstream 100 bases:

>100_bases
GAGGCTGCTGCTATGTTACAAAAACTCATAGACGTTGCCATTCGCAACCGTCTTTTGGTGATCTTGGCACTTATCGGAGC
CATTATCGCCAGTGCAGCCA

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Secretion Protein HlyD; Efflux Transporter RND Family MFP Subunit; Cation Efflux Protein; RND Family Transporter Membrane-Fusion Protein; Heavy Metal Resistance Protein Czcb; Cation Efflux System Protein; Cation Efflux Family Protein

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MKTNNKETVQTMMLNNGTAKSRLFDLNAITRAMSFGFFMSLTTAFVLPTVATAGDGHDHDAEEIVLIKTQDDGHDHNAEE
AKAHDDSHEHKAEEAKAHDDDHAHDAEEVKAKDDGHGHGEEEAEEEAHGIELTAAQLALAKIDVAQLSEQTFSLEDVATA
TIVVDRDRTVTIAPQVDVRVLKRNVVPGQEVAQGDVLLTLGGVAVAQAQADYINAAAEWSRVKRMSASAVSASRRLQAQV
DAELKRAILEAMKMTPAQIKALANAPETIGSYQLIAPINGRVQQDIALLGQIVPAGTALMQLTDESHLWVEAELTPTQAE
KVSLGSKTVVKVGDKSMEGTIIGRSHELDSVTRTEQILVAFENAGHVLHAGQFAELYLPDASQGGVILPDSALTRSSDGH
WQVFIEGAEGFEALEVEVVERQRGMNLVRGLTKDIKVVVSGAFFLASEQAKSGFDIHNH

Sequences:

>Translated_459_residues
MKTNNKETVQTMMLNNGTAKSRLFDLNAITRAMSFGFFMSLTTAFVLPTVATAGDGHDHDAEEIVLIKTQDDGHDHNAEE
AKAHDDSHEHKAEEAKAHDDDHAHDAEEVKAKDDGHGHGEEEAEEEAHGIELTAAQLALAKIDVAQLSEQTFSLEDVATA
TIVVDRDRTVTIAPQVDVRVLKRNVVPGQEVAQGDVLLTLGGVAVAQAQADYINAAAEWSRVKRMSASAVSASRRLQAQV
DAELKRAILEAMKMTPAQIKALANAPETIGSYQLIAPINGRVQQDIALLGQIVPAGTALMQLTDESHLWVEAELTPTQAE
KVSLGSKTVVKVGDKSMEGTIIGRSHELDSVTRTEQILVAFENAGHVLHAGQFAELYLPDASQGGVILPDSALTRSSDGH
WQVFIEGAEGFEALEVEVVERQRGMNLVRGLTKDIKVVVSGAFFLASEQAKSGFDIHNH
>Mature_459_residues
MKTNNKETVQTMMLNNGTAKSRLFDLNAITRAMSFGFFMSLTTAFVLPTVATAGDGHDHDAEEIVLIKTQDDGHDHNAEE
AKAHDDSHEHKAEEAKAHDDDHAHDAEEVKAKDDGHGHGEEEAEEEAHGIELTAAQLALAKIDVAQLSEQTFSLEDVATA
TIVVDRDRTVTIAPQVDVRVLKRNVVPGQEVAQGDVLLTLGGVAVAQAQADYINAAAEWSRVKRMSASAVSASRRLQAQV
DAELKRAILEAMKMTPAQIKALANAPETIGSYQLIAPINGRVQQDIALLGQIVPAGTALMQLTDESHLWVEAELTPTQAE
KVSLGSKTVVKVGDKSMEGTIIGRSHELDSVTRTEQILVAFENAGHVLHAGQFAELYLPDASQGGVILPDSALTRSSDGH
WQVFIEGAEGFEALEVEVVERQRGMNLVRGLTKDIKVVVSGAFFLASEQAKSGFDIHNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49498; Mature: 49498

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNNKETVQTMMLNNGTAKSRLFDLNAITRAMSFGFFMSLTTAFVLPTVATAGDGHDHD
CCCCCHHHHHHHEECCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
AEEIVLIKTQDDGHDHNAEEAKAHDDSHEHKAEEAKAHDDDHAHDAEEVKAKDDGHGHGE
CCCEEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCC
EEAEEEAHGIELTAAQLALAKIDVAQLSEQTFSLEDVATATIVVDRDRTVTIAPQVDVRV
HHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEECCCEEEECCCCCHHH
LKRNVVPGQEVAQGDVLLTLGGVAVAQAQADYINAAAEWSRVKRMSASAVSASRRLQAQV
HHHCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAELKRAILEAMKMTPAQIKALANAPETIGSYQLIAPINGRVQQDIALLGQIVPAGTALM
HHHHHHHHHHHHHCCHHHHHHHHCCCHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCEEE
QLTDESHLWVEAELTPTQAEKVSLGSKTVVKVGDKSMEGTIIGRSHELDSVTRTEQILVA
EECCCCCEEEEEECCCCCHHHCCCCCCEEEEECCCCCCCEEEECCCCCCHHHCCEEEEEE
FENAGHVLHAGQFAELYLPDASQGGVILPDSALTRSSDGHWQVFIEGAEGFEALEVEVVE
EECCCCEEECCCEEEEECCCCCCCCEECCCHHHCCCCCCCEEEEEECCCCCEEHHHHHHH
RQRGMNLVRGLTKDIKVVVSGAFFLASEQAKSGFDIHNH
HHHCHHHHHHHHHHHHHEEECHHEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKTNNKETVQTMMLNNGTAKSRLFDLNAITRAMSFGFFMSLTTAFVLPTVATAGDGHDHD
CCCCCHHHHHHHEECCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
AEEIVLIKTQDDGHDHNAEEAKAHDDSHEHKAEEAKAHDDDHAHDAEEVKAKDDGHGHGE
CCCEEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCC
EEAEEEAHGIELTAAQLALAKIDVAQLSEQTFSLEDVATATIVVDRDRTVTIAPQVDVRV
HHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEECCCEEEECCCCCHHH
LKRNVVPGQEVAQGDVLLTLGGVAVAQAQADYINAAAEWSRVKRMSASAVSASRRLQAQV
HHHCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAELKRAILEAMKMTPAQIKALANAPETIGSYQLIAPINGRVQQDIALLGQIVPAGTALM
HHHHHHHHHHHHHCCHHHHHHHHCCCHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCEEE
QLTDESHLWVEAELTPTQAEKVSLGSKTVVKVGDKSMEGTIIGRSHELDSVTRTEQILVA
EECCCCCEEEEEECCCCCHHHCCCCCCEEEEECCCCCCCEEEECCCCCCHHHCCEEEEEE
FENAGHVLHAGQFAELYLPDASQGGVILPDSALTRSSDGHWQVFIEGAEGFEALEVEVVE
EECCCCEEECCCEEEEECCCCCCCCEECCCHHHCCCCCCCEEEEEECCCCCEEHHHHHHH
RQRGMNLVRGLTKDIKVVVSGAFFLASEQAKSGFDIHNH
HHHCHHHHHHHHHHHHHEEECHHEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA