| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is resA [H]
Identifier: 157960354
GI number: 157960354
Start: 639013
End: 639576
Strand: Reverse
Name: resA [H]
Synonym: Spea_0525
Alternate gene names: 157960354
Gene position: 639576-639013 (Counterclockwise)
Preceding gene: 157960358
Following gene: 157960353
Centisome position: 12.36
GC content: 44.5
Gene sequence:
>564_bases ATGAAAGCCTTTAGCACCAAGAAAGCCTTTGCCAAGATAAAAGCCCTTAGCGGAATAAAAGCCCTTAGCACATTAAGAGC TCTTAAACTCCTTTTTACCAGCCTATTACTATTAACCATTAACGGCTGCGCCACCGCACCTAGCCAAGTTGAATACCTTA CTTATGTAAAAACTGGCGATAGCGTACCAGTTTCTCGCTTTGTCGATACTCAAGGCAACACGCTGGATCTCAGCGAGTCA AAAAATAATAAACTGCTGATCTTATTCGCCACTTGGTGCTCCGACTCACAGCGAACCATGAAGCACCTCGCGGGCTCAGA TCTACACCTGAGCCCGAATGTAGACATCATCGGCATTGGCCGCGAAGAGAGCAATTCCGCCTTGGATAAATTTGCCACCG AATATGAGCTTAACTTCCCCTTAGTAGCCGATACCGATAGGCAGATCTATGCACAATTTGCCAATGCAGGTATTCCAAGG TTGATCTTATTAGATGCCAACAACAAGGTAGTCAAAACCATCATAGGTGAGACTGAAAACACAATTACTAAAGTCGTTTG GTAA
Upstream 100 bases:
>100_bases CACAGTCAGAGGTTCGAGATACATGCAGTTGCAAGCAAGGCTTATACATTCTGTTAAACCTCTGTTACTTTAAAGACAAT GTAATGAGAATGGATGCACG
Downstream 100 bases:
>100_bases TAGCGAAAACGAGAGTAGACAAGGAAAGCCCATGAGCAAAATCATTACCGAGACGCCACGATTAATAATTAGAGAGTTTA ATCTCGACGATATCCAAGCC
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MKAFSTKKAFAKIKALSGIKALSTLRALKLLFTSLLLLTINGCATAPSQVEYLTYVKTGDSVPVSRFVDTQGNTLDLSES KNNKLLILFATWCSDSQRTMKHLAGSDLHLSPNVDIIGIGREESNSALDKFATEYELNFPLVADTDRQIYAQFANAGIPR LILLDANNKVVKTIIGETENTITKVVW
Sequences:
>Translated_187_residues MKAFSTKKAFAKIKALSGIKALSTLRALKLLFTSLLLLTINGCATAPSQVEYLTYVKTGDSVPVSRFVDTQGNTLDLSES KNNKLLILFATWCSDSQRTMKHLAGSDLHLSPNVDIIGIGREESNSALDKFATEYELNFPLVADTDRQIYAQFANAGIPR LILLDANNKVVKTIIGETENTITKVVW >Mature_187_residues MKAFSTKKAFAKIKALSGIKALSTLRALKLLFTSLLLLTINGCATAPSQVEYLTYVKTGDSVPVSRFVDTQGNTLDLSES KNNKLLILFATWCSDSQRTMKHLAGSDLHLSPNVDIIGIGREESNSALDKFATEYELNFPLVADTDRQIYAQFANAGIPR LILLDANNKVVKTIIGETENTITKVVW
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 20526; Mature: 20526
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFSTKKAFAKIKALSGIKALSTLRALKLLFTSLLLLTINGCATAPSQVEYLTYVKTGD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCC SVPVSRFVDTQGNTLDLSESKNNKLLILFATWCSDSQRTMKHLAGSDLHLSPNVDIIGIG CCCHHHEECCCCCEEEECCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEECCCCCEEECC REESNSALDKFATEYELNFPLVADTDRQIYAQFANAGIPRLILLDANNKVVKTIIGETEN CCCCCHHHHHHHHHEECCCCEEECCCHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCC TITKVVW CEEEECC >Mature Secondary Structure MKAFSTKKAFAKIKALSGIKALSTLRALKLLFTSLLLLTINGCATAPSQVEYLTYVKTGD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCC SVPVSRFVDTQGNTLDLSESKNNKLLILFATWCSDSQRTMKHLAGSDLHLSPNVDIIGIG CCCHHHEECCCCCEEEECCCCCCEEEEEEEECCCCHHHHHHHHCCCCEEECCCCCEEECC REESNSALDKFATEYELNFPLVADTDRQIYAQFANAGIPRLILLDANNKVVKTIIGETEN CCCCCHHHHHHHHHEECCCCEEECCCHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCC TITKVVW CEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA