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The map label for this gene is nosD [H]

Identifier: 157960315

GI number: 157960315

Start: 596830

End: 598170

Strand: Direct

Name: nosD [H]

Synonym: Spea_0486

Alternate gene names: 157960315

Gene position: 596830-598170 (Clockwise)

Preceding gene: 157960314

Following gene: 157960316

Centisome position: 11.53

GC content: 49.22

Gene sequence:

>1341_bases
ATGAATCTATTTATGAAAAATGCCACCTCTGCTCAAGTGCTACCACTATTATGCAAGGCAGCAAAACAAGTCTGCCTTAG
CGCTTGTCTCTCTCTACTCTTAAGCCCTGTTAGTCTAGCGGCTACTTATTCGGTGGCGAGCGCTGCAAGCCTCAAGCAAC
AGCTGCTAGACGCCATCGCCGGTGACACCATAGTGTTAAGCGCTGGCGAATATAGTGGTCATTTTGAGATCCATCAGGCC
ATCACCTTAACAGGTGAGAAGGGCGCAATTATTGATGCAGAGGGCCGTGGTAGTGCTATCACGATCTTTAGCTCAGATGT
GACCATCTCAAATTTACAAATTCAGCACTGGGGCGGCGATCTTTATGAGCTCGACTCAGGCATCTTACTGCAAGACAAAG
CTAACCGAGTACGTATCGAGTCCAGCCAGTTTAAAGGTGACGGCTTTGGGATCTACTCTGAAAATGCCAGCCATATTACA
GTGGCGAACAATATTATCTCAGGTAACCCCGCACTTTATAAGCTCGACAGAGGCGACGGTGTATACCTCAAAGGGGTCGA
TGCCCCTGTGGTGCATGGTAACCAAATCTCCCATGTGAGAGACGGCGTTTATCTCGAAACCAGCACCAACAGCCTAGTGT
TCGATAACCGCTTCCACTCTGCACAATACGGTATTCACTACATGTACACCAAGCATGACGAGGCCTATGGTAATCGGGTG
GATAGCGTCGATGGTGGCTACGCCATCATGAGCTCTGAGTCTGTTAATCTGCATCAAAATCAGGCATCTAACACTATCGA
CTTTGGCGTGCTGCTCAACATCAGTAACCACTGCATCGTCAGTAATAACCGCTTATCTCAGGCCCATAACCCCCAAGGTA
CCGCCGAGCTGGGTAACGAAGGTAAAGGCATCTTTATTTACGGTGCTCGCGACAATGAAGTGAGCCATAACTTGTTCTCA
ACCAGTGATATCGGCATCTACATGGCCATGGGCGGCGAGAAGAATAAGGTTTACGGCAATCAGTTTGTTAATAACAAGAC
TCAGGTGAAATACGTCGGCGACTCGCTGCTTGAGTGGAGCCATCAAGGACGAGGCAATTACTGGAGTGGCCATATGGGCT
GGGACAGTAATCACGACGGTATTGCCGATAAGGCATACAGACCGAACGATCATCTCGATAAACTTTTCTGGCTCTATCCT
GAGGCGCGCTTCTTAATGAATAGCCCTGTGGTGGCACTGCTGCGCTGGGTGCAAGGTCAGTTTGAGTTTGGCCCGGCAAC
GGGGATTGTCGATAGCTTTCCTCTACTGGGTATGAGCAATGTCGATAGGGGGCCATTTTGA

Upstream 100 bases:

>100_bases
GATTGATATCGCCCTGTTAGCTGGTGAGTAATGGCTCATTGCCATTACGAATAAATTAAGTCCGGTAAGTGATTGCCTGT
GATGATGACTTACCAATCTA

Downstream 100 bases:

>100_bases
TGAAAGTGGCGATGAACGCTGCAACCCAAGTGCACGGGGTTAATCATAAAAGCAGGGCTGAGAATACAATGTCACAACTC
GCAATACAGCTAACCGATGT

Product: periplasmic copper-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MNLFMKNATSAQVLPLLCKAAKQVCLSACLSLLLSPVSLAATYSVASAASLKQQLLDAIAGDTIVLSAGEYSGHFEIHQA
ITLTGEKGAIIDAEGRGSAITIFSSDVTISNLQIQHWGGDLYELDSGILLQDKANRVRIESSQFKGDGFGIYSENASHIT
VANNIISGNPALYKLDRGDGVYLKGVDAPVVHGNQISHVRDGVYLETSTNSLVFDNRFHSAQYGIHYMYTKHDEAYGNRV
DSVDGGYAIMSSESVNLHQNQASNTIDFGVLLNISNHCIVSNNRLSQAHNPQGTAELGNEGKGIFIYGARDNEVSHNLFS
TSDIGIYMAMGGEKNKVYGNQFVNNKTQVKYVGDSLLEWSHQGRGNYWSGHMGWDSNHDGIADKAYRPNDHLDKLFWLYP
EARFLMNSPVVALLRWVQGQFEFGPATGIVDSFPLLGMSNVDRGPF

Sequences:

>Translated_446_residues
MNLFMKNATSAQVLPLLCKAAKQVCLSACLSLLLSPVSLAATYSVASAASLKQQLLDAIAGDTIVLSAGEYSGHFEIHQA
ITLTGEKGAIIDAEGRGSAITIFSSDVTISNLQIQHWGGDLYELDSGILLQDKANRVRIESSQFKGDGFGIYSENASHIT
VANNIISGNPALYKLDRGDGVYLKGVDAPVVHGNQISHVRDGVYLETSTNSLVFDNRFHSAQYGIHYMYTKHDEAYGNRV
DSVDGGYAIMSSESVNLHQNQASNTIDFGVLLNISNHCIVSNNRLSQAHNPQGTAELGNEGKGIFIYGARDNEVSHNLFS
TSDIGIYMAMGGEKNKVYGNQFVNNKTQVKYVGDSLLEWSHQGRGNYWSGHMGWDSNHDGIADKAYRPNDHLDKLFWLYP
EARFLMNSPVVALLRWVQGQFEFGPATGIVDSFPLLGMSNVDRGPF
>Mature_446_residues
MNLFMKNATSAQVLPLLCKAAKQVCLSACLSLLLSPVSLAATYSVASAASLKQQLLDAIAGDTIVLSAGEYSGHFEIHQA
ITLTGEKGAIIDAEGRGSAITIFSSDVTISNLQIQHWGGDLYELDSGILLQDKANRVRIESSQFKGDGFGIYSENASHIT
VANNIISGNPALYKLDRGDGVYLKGVDAPVVHGNQISHVRDGVYLETSTNSLVFDNRFHSAQYGIHYMYTKHDEAYGNRV
DSVDGGYAIMSSESVNLHQNQASNTIDFGVLLNISNHCIVSNNRLSQAHNPQGTAELGNEGKGIFIYGARDNEVSHNLFS
TSDIGIYMAMGGEKNKVYGNQFVNNKTQVKYVGDSLLEWSHQGRGNYWSGHMGWDSNHDGIADKAYRPNDHLDKLFWLYP
EARFLMNSPVVALLRWVQGQFEFGPATGIVDSFPLLGMSNVDRGPF

Specific function: Involved in copper processing and transport; in the assembly of the copper chromophores of nitrous oxide reductase [H]

COG id: COG3420

COG function: function code P; Nitrous oxidase accessory protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006633
- InterPro:   IPR007742
- InterPro:   IPR022441
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF05048 NosD [H]

EC number: NA

Molecular weight: Translated: 48668; Mature: 48668

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLFMKNATSAQVLPLLCKAAKQVCLSACLSLLLSPVSLAATYSVASAASLKQQLLDAIA
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC
GDTIVLSAGEYSGHFEIHQAITLTGEKGAIIDAEGRGSAITIFSSDVTISNLQIQHWGGD
CCEEEEECCCCCCEEEEEEEEEEECCCCCEEECCCCCCEEEEEECCEEEEEEEEEECCCC
LYELDSGILLQDKANRVRIESSQFKGDGFGIYSENASHITVANNIISGNPALYKLDRGDG
EEECCCCEEEECCCCEEEEECCCCCCCCEEEECCCCCEEEEECCEECCCCCEEEEECCCE
VYLKGVDAPVVHGNQISHVRDGVYLETSTNSLVFDNRFHSAQYGIHYMYTKHDEAYGNRV
EEEEECCCCEEECCCCCHHHCCEEEEECCCCEEEECCCCCCCCCEEEEEECCCHHHCCCC
DSVDGGYAIMSSESVNLHQNQASNTIDFGVLLNISNHCIVSNNRLSQAHNPQGTAELGNE
CCCCCCEEEEECCCCEEECCCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCHHCCCC
GKGIFIYGARDNEVSHNLFSTSDIGIYMAMGGEKNKVYGNQFVNNKTQVKYVGDSLLEWS
CCEEEEEECCCCCCCCCEECCCCCEEEEEECCCCCCCCCCHHCCCCEEEEECCHHHHHHH
HQGRGNYWSGHMGWDSNHDGIADKAYRPNDHLDKLFWLYPEARFLMNSPVVALLRWVQGQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCEEEECCCHHHHHCCCHHHHHHHHCCC
FEFGPATGIVDSFPLLGMSNVDRGPF
EECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNLFMKNATSAQVLPLLCKAAKQVCLSACLSLLLSPVSLAATYSVASAASLKQQLLDAIA
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC
GDTIVLSAGEYSGHFEIHQAITLTGEKGAIIDAEGRGSAITIFSSDVTISNLQIQHWGGD
CCEEEEECCCCCCEEEEEEEEEEECCCCCEEECCCCCCEEEEEECCEEEEEEEEEECCCC
LYELDSGILLQDKANRVRIESSQFKGDGFGIYSENASHITVANNIISGNPALYKLDRGDG
EEECCCCEEEECCCCEEEEECCCCCCCCEEEECCCCCEEEEECCEECCCCCEEEEECCCE
VYLKGVDAPVVHGNQISHVRDGVYLETSTNSLVFDNRFHSAQYGIHYMYTKHDEAYGNRV
EEEEECCCCEEECCCCCHHHCCEEEEECCCCEEEECCCCCCCCCEEEEEECCCHHHCCCC
DSVDGGYAIMSSESVNLHQNQASNTIDFGVLLNISNHCIVSNNRLSQAHNPQGTAELGNE
CCCCCCEEEEECCCCEEECCCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCHHCCCC
GKGIFIYGARDNEVSHNLFSTSDIGIYMAMGGEKNKVYGNQFVNNKTQVKYVGDSLLEWS
CCEEEEEECCCCCCCCCEECCCCCEEEEEECCCCCCCCCCHHCCCCEEEEECCHHHHHHH
HQGRGNYWSGHMGWDSNHDGIADKAYRPNDHLDKLFWLYPEARFLMNSPVVALLRWVQGQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCEEEECCCHHHHHCCCHHHHHHHHCCC
FEFGPATGIVDSFPLLGMSNVDRGPF
EECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]