| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960303
Identifier: 157960303
GI number: 157960303
Start: 584044
End: 584259
Strand: Reverse
Name: 157960303
Synonym: Spea_0474
Alternate gene names: NA
Gene position: 584259-584044 (Counterclockwise)
Preceding gene: 157960305
Following gene: 157960302
Centisome position: 11.29
GC content: 43.52
Gene sequence:
>216_bases ATGGCCAGTTTTAGTATTAGTCGGCTCAATACCAGCGTAGGAATAGTTAAGCTCGCAGGTGATCTTGATCTAACGGGTAG CATCAACATCTCTCAATTGTCGATCATGGCAACCGATGGCTGGCAGGCACTCGATATTGACCATCAACATAGCCAAAACT TAATCAAACAGATCCAAGATCAGATCATCAGCCACCTTGCCAATAAGCTCAATTAA
Upstream 100 bases:
>100_bases GACATCCACCCGCACAAAAATACAACAACCCGGCAAACTTTGTTGCAAGTTATTCGATATGCCCCTATGTTGACAACAGG CAATTGCAACAGGGTAGATC
Downstream 100 bases:
>100_bases GGCGTTAATAAATCGATTCTTTATTTGCACTCTCTATGGGAAAACTGCCAATGAATACCAAAATCCTCCTGACTGAGTGA CTTTCATTTAGCGCATCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MASFSISRLNTSVGIVKLAGDLDLTGSINISQLSIMATDGWQALDIDHQHSQNLIKQIQDQIISHLANKLN
Sequences:
>Translated_71_residues MASFSISRLNTSVGIVKLAGDLDLTGSINISQLSIMATDGWQALDIDHQHSQNLIKQIQDQIISHLANKLN >Mature_70_residues ASFSISRLNTSVGIVKLAGDLDLTGSINISQLSIMATDGWQALDIDHQHSQNLIKQIQDQIISHLANKLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7743; Mature: 7612
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFSISRLNTSVGIVKLAGDLDLTGSINISQLSIMATDGWQALDIDHQHSQNLIKQIQD CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCEEECCCCHHHHHHHHHHHH QIISHLANKLN HHHHHHHHHCC >Mature Secondary Structure ASFSISRLNTSVGIVKLAGDLDLTGSINISQLSIMATDGWQALDIDHQHSQNLIKQIQD CCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCEEECCCCHHHHHHHHHHHH QIISHLANKLN HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA