| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960279
Identifier: 157960279
GI number: 157960279
Start: 558677
End: 560740
Strand: Direct
Name: 157960279
Synonym: Spea_0450
Alternate gene names: NA
Gene position: 558677-560740 (Clockwise)
Preceding gene: 157960278
Following gene: 157960280
Centisome position: 10.8
GC content: 48.16
Gene sequence:
>2064_bases ATGAGAAAATTTAATAAATGCAAAGCGGCGCTTATTGTCGCCGCGGCTTTCGGTCTAGCAGCCTGTAGCGACGGTAAAGA TGGTAGTGACGGTGAAGATGGCACCAGCCCATTACCGCCGATAGTCGAAGCTACAGAGATCACCAATGTTGAAGTGCTAA GTCATACTCTTGAAGAGGGCGCAGTGCGCTTTGAGTTTGAAGTGACTAACGAAGAAGGCTTGCTGGTTAGCGGTCTTGAA AAAGTGAATGCAGAAGTTGCAGAGTTAACTGATAAAGGTATTGCTCGTAGTCGCCCAGAATTTGAGGGCACCATTGCCGG TGGTAGTGCATCAGAGGAGACCGATGGTGCTAGCCTGACCATGACTGCAGATGGTCGTTATGAATTTCTAGCACCAATGC CAGCAGTTAATGCAGGTACTGAAGGTATAATCCGACTGGCCGTTGGTGGCGGTGAGAAGATCGCTAAATCAAACTACATT CTAGTCGACAAGTCAGAGGGCCTTCATACGACCTCTACGGCAACCTGCCATACTTGTCATGTCGACTACGCCGCATCGAA CTTAAAACATCCAAGCTATACCGCAATTAATACCGATGGTGAAACCGATCTGGTCGCAGGTTGTATGGTCTGCCACGGAA ACGTGGTGCGCGATGACGGCGGATACGCGCGTAATTCAATGCAGAAGATTGGTCATATCAATCATCAGAAATTTGAAAAG GATTTCGAGCCAGCTAACTGTTACAGCTGTCATGCTGAGCCTATCACTAAGGTAAACAGTATGAGTACTTGTACTGACTG TCATGATGCCGCAGGTGTAGGTTCTGCTGCGGTTGCAATGACCTACAGCACATTCGATGAGTCAGATGATGTGCGCTTGT TCCATAAGAAGGTGGGTGAGCGAGCCGATATTAGAGCGCAGCATTACACAACCACTTCTGCGCCTTACACAAACAGCAGT TTGGAGTGGGATGACCATGAAACCACAGGTGGTTGGTGTACCGATATCGCACTGTTTAATACCGATGCGGAAACCCCTGT TCAGCTCAATATTGCCCAGTTATATGCCGCAGGCACGTTAACTTATGCCGGAGCGTATATTCACGCATACCATAATGATT CCATTGTGGGTCGCCCAAGCCCACGAGATTCAGGTGGTGTCACAAATAGTCAGTACGTTGAAAAGTCAGATGGCTCTAGA GCCGTGTGTTATGTGCGCCTTGATGGCATCGATACCGGCTTCGCTAATGCCGGCTTTACTGCTAGCTCAAGGGTGACTTT CAAGCAGCAAGATGATGATGGCGGCTATGACGGTGTCTCACTCACTAGTTACTCTGATGTTGTCGATAGCAACGAGGAAA AACTTCAAGAGTATGAGCGCCGTCATAGTGTCACTTTAGATAGCTGTACCACTTGTCACAACAACGAAACCAACTATCAC AAGAATGGTAGCTACAATGATGGTGGTCTAGATTGTGTGGCTTGCCATAACAATGGTCAAGATCGTGCAGGCCAGCGAGT GGTAGGCCTAGATGCTTTCGCAACTGACAGCTTCCGCATTAATGCGGGCTACACCATTGCTGCAATCAGTGGTGGTGAAC AAGTTGGTTGGAAGGCCAATAGTGCGCCAGGCTTTGGTCCTTTAGTGCATGCCCAGCATTGGGGGCTGCAATCTGTTATT GGCTCGGAGATGAGTCGAGATAATGAGATTGCGGTAACCAATTCTGCGGCCAAGCTGAACGCCGATAACTGTGTCTCTTG TCATGCCGATGGCATCGATCTTAACGCGGTGCCGAATCAATACATGCTATCTAGAGCCTTCAACGGTGGAGATGCTGGAG AGTCAGGTGTTGCCTCAAGTCCTATTACCGCTAACTGTTTTGCTTGTCATAACAACGACCAAGCGCTTAACCATATGATT TCAAACGGTGGAGAGCTTAACCTTGAAGTTGATAAGACAAGTGATTGGTTTACTCAACCAACCTCTGAGTCTTGTGCGAC TTGTCATGCAGAAGGGCGCTCGTACGGGATCGAGAAGTATCACGTATTTGACCGTAAAGAATAA
Upstream 100 bases:
>100_bases TAATTGTTGGGGAATTAATCACATAAATAAACACCTACTACTTATAAGGTATTTAAGGGGGAGTAAAAGGTCACGACTTA ATTATAGTTATGGAGTGATG
Downstream 100 bases:
>100_bases AAAGTAACGGCTAGCTTCTCCCTGCAAACAGCTAGCCCACTACTTTTTTGGGGCTCTTTTATAGAGCCCTTTTTTTAATG GTTTAGCCTACTAACCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 687; Mature: 687
Protein sequence:
>687_residues MRKFNKCKAALIVAAAFGLAACSDGKDGSDGEDGTSPLPPIVEATEITNVEVLSHTLEEGAVRFEFEVTNEEGLLVSGLE KVNAEVAELTDKGIARSRPEFEGTIAGGSASEETDGASLTMTADGRYEFLAPMPAVNAGTEGIIRLAVGGGEKIAKSNYI LVDKSEGLHTTSTATCHTCHVDYAASNLKHPSYTAINTDGETDLVAGCMVCHGNVVRDDGGYARNSMQKIGHINHQKFEK DFEPANCYSCHAEPITKVNSMSTCTDCHDAAGVGSAAVAMTYSTFDESDDVRLFHKKVGERADIRAQHYTTTSAPYTNSS LEWDDHETTGGWCTDIALFNTDAETPVQLNIAQLYAAGTLTYAGAYIHAYHNDSIVGRPSPRDSGGVTNSQYVEKSDGSR AVCYVRLDGIDTGFANAGFTASSRVTFKQQDDDGGYDGVSLTSYSDVVDSNEEKLQEYERRHSVTLDSCTTCHNNETNYH KNGSYNDGGLDCVACHNNGQDRAGQRVVGLDAFATDSFRINAGYTIAAISGGEQVGWKANSAPGFGPLVHAQHWGLQSVI GSEMSRDNEIAVTNSAAKLNADNCVSCHADGIDLNAVPNQYMLSRAFNGGDAGESGVASSPITANCFACHNNDQALNHMI SNGGELNLEVDKTSDWFTQPTSESCATCHAEGRSYGIEKYHVFDRKE
Sequences:
>Translated_687_residues MRKFNKCKAALIVAAAFGLAACSDGKDGSDGEDGTSPLPPIVEATEITNVEVLSHTLEEGAVRFEFEVTNEEGLLVSGLE KVNAEVAELTDKGIARSRPEFEGTIAGGSASEETDGASLTMTADGRYEFLAPMPAVNAGTEGIIRLAVGGGEKIAKSNYI LVDKSEGLHTTSTATCHTCHVDYAASNLKHPSYTAINTDGETDLVAGCMVCHGNVVRDDGGYARNSMQKIGHINHQKFEK DFEPANCYSCHAEPITKVNSMSTCTDCHDAAGVGSAAVAMTYSTFDESDDVRLFHKKVGERADIRAQHYTTTSAPYTNSS LEWDDHETTGGWCTDIALFNTDAETPVQLNIAQLYAAGTLTYAGAYIHAYHNDSIVGRPSPRDSGGVTNSQYVEKSDGSR AVCYVRLDGIDTGFANAGFTASSRVTFKQQDDDGGYDGVSLTSYSDVVDSNEEKLQEYERRHSVTLDSCTTCHNNETNYH KNGSYNDGGLDCVACHNNGQDRAGQRVVGLDAFATDSFRINAGYTIAAISGGEQVGWKANSAPGFGPLVHAQHWGLQSVI GSEMSRDNEIAVTNSAAKLNADNCVSCHADGIDLNAVPNQYMLSRAFNGGDAGESGVASSPITANCFACHNNDQALNHMI SNGGELNLEVDKTSDWFTQPTSESCATCHAEGRSYGIEKYHVFDRKE >Mature_687_residues MRKFNKCKAALIVAAAFGLAACSDGKDGSDGEDGTSPLPPIVEATEITNVEVLSHTLEEGAVRFEFEVTNEEGLLVSGLE KVNAEVAELTDKGIARSRPEFEGTIAGGSASEETDGASLTMTADGRYEFLAPMPAVNAGTEGIIRLAVGGGEKIAKSNYI LVDKSEGLHTTSTATCHTCHVDYAASNLKHPSYTAINTDGETDLVAGCMVCHGNVVRDDGGYARNSMQKIGHINHQKFEK DFEPANCYSCHAEPITKVNSMSTCTDCHDAAGVGSAAVAMTYSTFDESDDVRLFHKKVGERADIRAQHYTTTSAPYTNSS LEWDDHETTGGWCTDIALFNTDAETPVQLNIAQLYAAGTLTYAGAYIHAYHNDSIVGRPSPRDSGGVTNSQYVEKSDGSR AVCYVRLDGIDTGFANAGFTASSRVTFKQQDDDGGYDGVSLTSYSDVVDSNEEKLQEYERRHSVTLDSCTTCHNNETNYH KNGSYNDGGLDCVACHNNGQDRAGQRVVGLDAFATDSFRINAGYTIAAISGGEQVGWKANSAPGFGPLVHAQHWGLQSVI GSEMSRDNEIAVTNSAAKLNADNCVSCHADGIDLNAVPNQYMLSRAFNGGDAGESGVASSPITANCFACHNNDQALNHMI SNGGELNLEVDKTSDWFTQPTSESCATCHAEGRSYGIEKYHVFDRKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73416; Mature: 73416
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFNKCKAALIVAAAFGLAACSDGKDGSDGEDGTSPLPPIVEATEITNVEVLSHTLEEG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCC AVRFEFEVTNEEGLLVSGLEKVNAEVAELTDKGIARSRPEFEGTIAGGSASEETDGASLT CEEEEEEEECCCCEEEECHHHHCHHHHHHHHCCHHCCCCCCCEEEECCCCCCCCCCCEEE MTADGRYEFLAPMPAVNAGTEGIIRLAVGGGEKIAKSNYILVDKSEGLHTTSTATCHTCH EEECCCEEEECCCCCCCCCCCCEEEEEECCCCEEECCCEEEEECCCCCEECCCCEEEEEE VDYAASNLKHPSYTAINTDGETDLVAGCMVCHGNVVRDDGGYARNSMQKIGHINHQKFEK EEHHHHCCCCCCEEEECCCCCHHHHHEEHHHCCCEEECCCCHHHHHHHHHHCCCHHHHHC DFEPANCYSCHAEPITKVNSMSTCTDCHDAAGVGSAAVAMTYSTFDESDDVRLFHKKVGE CCCCCCCEECCCCHHHHCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHCCC RADIRAQHYTTTSAPYTNSSLEWDDHETTGGWCTDIALFNTDAETPVQLNIAQLYAAGTL CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEHHHHEECCCE TYAGAYIHAYHNDSIVGRPSPRDSGGVTNSQYVEKSDGSRAVCYVRLDGIDTGFANAGFT EECCEEEEEEECCCEECCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCC ASSRVTFKQQDDDGGYDGVSLTSYSDVVDSNEEKLQEYERRHSVTLDSCTTCHNNETNYH CCCEEEEEECCCCCCCCCEEECCHHHHHCCCHHHHHHHHHHCCEEEHHCCCCCCCCCCCC KNGSYNDGGLDCVACHNNGQDRAGQRVVGLDAFATDSFRINAGYTIAAISGGEQVGWKAN CCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCEEEECCEEEEEECCCCCCCEECC SAPGFGPLVHAQHWGLQSVIGSEMSRDNEIAVTNSAAKLNADNCVSCHADGIDLNAVPNQ CCCCCCCCHHHHHCCHHHHHHHHHCCCCCEEEECCCEEECCCCEEEECCCCEECCCCCCH YMLSRAFNGGDAGESGVASSPITANCFACHNNDQALNHMISNGGELNLEVDKTSDWFTQP HHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCCCCC TSESCATCHAEGRSYGIEKYHVFDRKE CCCHHHEECCCCCCCCCEEEEECCCCC >Mature Secondary Structure MRKFNKCKAALIVAAAFGLAACSDGKDGSDGEDGTSPLPPIVEATEITNVEVLSHTLEEG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCC AVRFEFEVTNEEGLLVSGLEKVNAEVAELTDKGIARSRPEFEGTIAGGSASEETDGASLT CEEEEEEEECCCCEEEECHHHHCHHHHHHHHCCHHCCCCCCCEEEECCCCCCCCCCCEEE MTADGRYEFLAPMPAVNAGTEGIIRLAVGGGEKIAKSNYILVDKSEGLHTTSTATCHTCH EEECCCEEEECCCCCCCCCCCCEEEEEECCCCEEECCCEEEEECCCCCEECCCCEEEEEE VDYAASNLKHPSYTAINTDGETDLVAGCMVCHGNVVRDDGGYARNSMQKIGHINHQKFEK EEHHHHCCCCCCEEEECCCCCHHHHHEEHHHCCCEEECCCCHHHHHHHHHHCCCHHHHHC DFEPANCYSCHAEPITKVNSMSTCTDCHDAAGVGSAAVAMTYSTFDESDDVRLFHKKVGE CCCCCCCEECCCCHHHHCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHCCC RADIRAQHYTTTSAPYTNSSLEWDDHETTGGWCTDIALFNTDAETPVQLNIAQLYAAGTL CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEHHHHEECCCE TYAGAYIHAYHNDSIVGRPSPRDSGGVTNSQYVEKSDGSRAVCYVRLDGIDTGFANAGFT EECCEEEEEEECCCEECCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCC ASSRVTFKQQDDDGGYDGVSLTSYSDVVDSNEEKLQEYERRHSVTLDSCTTCHNNETNYH CCCEEEEEECCCCCCCCCEEECCHHHHHCCCHHHHHHHHHHCCEEEHHCCCCCCCCCCCC KNGSYNDGGLDCVACHNNGQDRAGQRVVGLDAFATDSFRINAGYTIAAISGGEQVGWKAN CCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCEEEECCEEEEEECCCCCCCEECC SAPGFGPLVHAQHWGLQSVIGSEMSRDNEIAVTNSAAKLNADNCVSCHADGIDLNAVPNQ CCCCCCCCHHHHHCCHHHHHHHHHCCCCCEEEECCCEEECCCCEEEECCCCEECCCCCCH YMLSRAFNGGDAGESGVASSPITANCFACHNNDQALNHMISNGGELNLEVDKTSDWFTQP HHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCCCCC TSESCATCHAEGRSYGIEKYHVFDRKE CCCHHHEECCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA