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The map label for this gene is ytfE [C]

Identifier: 157960212

GI number: 157960212

Start: 461706

End: 462428

Strand: Reverse

Name: ytfE [C]

Synonym: Spea_0383

Alternate gene names: 157960212

Gene position: 462428-461706 (Counterclockwise)

Preceding gene: 157960217

Following gene: 157960204

Centisome position: 8.94

GC content: 46.47

Gene sequence:

>723_bases
ATGTCTCAATCAAAAGTGTCTCAATCCAAAGAAAGCCTGCTTGCCTCTCGTGTCGGTGAATTAGTCGCTAACGATTTCCG
TACTGCCCACCTGTTTAGCCAATACGGTATCGACTTTTGTTGTGGCGGTGGAATTACATTAGAGCGGGCGATTAAACGTT
TCGATGCCGATGAAGCAGCACTGCTTGAGGCGTTAATGGCATTTGAGACTGAAGGCGATAAGCAACAAGGTTTAGAGCAA
CTGCCTTTACCCGATCTACTCAACTATATTGAATCGACTCACCACACCTTTGTGCGTGAAAAGGCGCCGCTACTCATCGA
ATATAGTGAAAAGATGGTGCGAGCTCATGGTGAAAACCACAATGAAATAAAACCATTGGCAGGTTGGATCCGCGCATTGG
TCGATGACTTGATGCCGCATCTAATGAAAGAGGAACGGATACTGTTCCCAGCAATTTTAGGGCTGCACAACCAAGTTGAG
ATGCAAAATTGCTTCGGCCATATCGGTAACCCGATAAATGCCATGCAATATGAGCATGATGATGCATTACAGATCTTTGA
AAAGATCCGCGAGCTAACAAATGGCTTAGTGCCGCCTGCACATGCCTGCACCACATGGCGCGTTTGTTACGCCAGTTTGG
CGGAGTTTGAAGCCGACTTGAAACAGCATATCTACCTTGAGAACAATATCTTGTTCCCAAAGGCACTCGCGCTAACAGCG
TAA

Upstream 100 bases:

>100_bases
AACTGAGTATTTTACTCAAGTAATCATTGAATACAATCAAAGATGCAAATAATATGCATGTAAAATATAGCATTTAATTT
ACGCTAGCTTGGAGTTGCCA

Downstream 100 bases:

>100_bases
ATCTAAGCCCCCAGTAAACCAGCTAGAACAGAAAGGCTCACCGAGGTGAGCCTTGTTACTAAATTGCAGTTTGCTGCAAT
GGCGACCAGCGCACTGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSQSKVSQSKESLLASRVGELVANDFRTAHLFSQYGIDFCCGGGITLERAIKRFDADEAALLEALMAFETEGDKQQGLEQ
LPLPDLLNYIESTHHTFVREKAPLLIEYSEKMVRAHGENHNEIKPLAGWIRALVDDLMPHLMKEERILFPAILGLHNQVE
MQNCFGHIGNPINAMQYEHDDALQIFEKIRELTNGLVPPAHACTTWRVCYASLAEFEADLKQHIYLENNILFPKALALTA

Sequences:

>Translated_240_residues
MSQSKVSQSKESLLASRVGELVANDFRTAHLFSQYGIDFCCGGGITLERAIKRFDADEAALLEALMAFETEGDKQQGLEQ
LPLPDLLNYIESTHHTFVREKAPLLIEYSEKMVRAHGENHNEIKPLAGWIRALVDDLMPHLMKEERILFPAILGLHNQVE
MQNCFGHIGNPINAMQYEHDDALQIFEKIRELTNGLVPPAHACTTWRVCYASLAEFEADLKQHIYLENNILFPKALALTA
>Mature_239_residues
SQSKVSQSKESLLASRVGELVANDFRTAHLFSQYGIDFCCGGGITLERAIKRFDADEAALLEALMAFETEGDKQQGLEQL
PLPDLLNYIESTHHTFVREKAPLLIEYSEKMVRAHGENHNEIKPLAGWIRALVDDLMPHLMKEERILFPAILGLHNQVEM
QNCFGHIGNPINAMQYEHDDALQIFEKIRELTNGLVPPAHACTTWRVCYASLAEFEADLKQHIYLENNILFPKALALTA

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=220, Percent_Identity=37.7272727272727, Blast_Score=147, Evalue=5e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 27100; Mature: 26969

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSKVSQSKESLLASRVGELVANDFRTAHLFSQYGIDFCCGGGITLERAIKRFDADEAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHCCHHHH
LLEALMAFETEGDKQQGLEQLPLPDLLNYIESTHHTFVREKAPLLIEYSEKMVRAHGENH
HHHHHHHHHCCCCHHCCHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
NEIKPLAGWIRALVDDLMPHLMKEERILFPAILGLHNQVEMQNCFGHIGNPINAMQYEHD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCCH
DALQIFEKIRELTNGLVPPAHACTTWRVCYASLAEFEADLKQHIYLENNILFPKALALTA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC
>Mature Secondary Structure 
SQSKVSQSKESLLASRVGELVANDFRTAHLFSQYGIDFCCGGGITLERAIKRFDADEAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHCCHHHH
LLEALMAFETEGDKQQGLEQLPLPDLLNYIESTHHTFVREKAPLLIEYSEKMVRAHGENH
HHHHHHHHHCCCCHHCCHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
NEIKPLAGWIRALVDDLMPHLMKEERILFPAILGLHNQVEMQNCFGHIGNPINAMQYEHD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHCCCH
DALQIFEKIRELTNGLVPPAHACTTWRVCYASLAEFEADLKQHIYLENNILFPKALALTA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA