| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is yigA [C]
Identifier: 157960208
GI number: 157960208
Start: 458803
End: 459435
Strand: Direct
Name: yigA [C]
Synonym: Spea_0379
Alternate gene names: 157960208
Gene position: 458803-459435 (Clockwise)
Preceding gene: 157960207
Following gene: 157960209
Centisome position: 8.87
GC content: 46.29
Gene sequence:
>633_bases ATGATAGATAGCTCTAAGTCAAACCTACCCTTTGATGAGATTCTGATCCGTGAATACCTGCTGGATAACCCTGACTTCTT TAGTCGTTATCCAGAGCTATTGCTCGCGATGCGCATCCCCCACGCCGAGCGTGGTGCGGTGTCGTTGGTCGAGCGTCAGC AAGAGATGCTGCGTCAACGAGTGAATCAGCTGGAAGAAGAGATCACGGCACTTTTAGCTATGGCATCTCGCAATGAACAG ATCTTCATGTTTAACAGTGCATTATCTATGGAACTGCTAAAATGTGAAGATATGGGCGAATTGCGGCAGGTGTTGTCTAA TAGCTTAAAACAACAATTTCAGTTTAGTCATGTCAGGCTCATTACAGTACATGATATCGACAGTGAACTGTCGCAGATCT GGAGTAAGCGTCTCGACTCGGGCTACTATTTTGGTCGCCTAACCAATGAAGAGTCGAAGCGCCTGTTTGGCAGTGAAGTG GGCTCGGTAGCACTATCTCGCTTATCGAAAGAGTGTGGTCAGGTGATTTTTGCTATCGCTAGCCAAGATCCCATGCACTT TCATCCAGAGATGGACTACCTTCTTTTGTCACAACTCAAGCAGCTGCTCGATCATCAACTGACAAAAATCTAA
Upstream 100 bases:
>100_bases ACTTGCCAGGTGGCAGCCTAATGATCAACTGGGACGGTGAGGGTAAGCCGCTATGGATGACTGGGCCTGCTGAGCATGTT TATGATGGGCAGATTGCGCA
Downstream 100 bases:
>100_bases TAGCGAGGCTCTATGGCTGACGAAGCGTTATCGAGTAATGTGCGTTGGTTGACTGATTTTGAGCGCTACCTGCGCACCGA GCGTCAAGTCTCTGCTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MIDSSKSNLPFDEILIREYLLDNPDFFSRYPELLLAMRIPHAERGAVSLVERQQEMLRQRVNQLEEEITALLAMASRNEQ IFMFNSALSMELLKCEDMGELRQVLSNSLKQQFQFSHVRLITVHDIDSELSQIWSKRLDSGYYFGRLTNEESKRLFGSEV GSVALSRLSKECGQVIFAIASQDPMHFHPEMDYLLLSQLKQLLDHQLTKI
Sequences:
>Translated_210_residues MIDSSKSNLPFDEILIREYLLDNPDFFSRYPELLLAMRIPHAERGAVSLVERQQEMLRQRVNQLEEEITALLAMASRNEQ IFMFNSALSMELLKCEDMGELRQVLSNSLKQQFQFSHVRLITVHDIDSELSQIWSKRLDSGYYFGRLTNEESKRLFGSEV GSVALSRLSKECGQVIFAIASQDPMHFHPEMDYLLLSQLKQLLDHQLTKI >Mature_210_residues MIDSSKSNLPFDEILIREYLLDNPDFFSRYPELLLAMRIPHAERGAVSLVERQQEMLRQRVNQLEEEITALLAMASRNEQ IFMFNSALSMELLKCEDMGELRQVLSNSLKQQFQFSHVRLITVHDIDSELSQIWSKRLDSGYYFGRLTNEESKRLFGSEV GSVALSRLSKECGQVIFAIASQDPMHFHPEMDYLLLSQLKQLLDHQLTKI
Specific function: Unknown
COG id: COG3159
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24385; Mature: 24385
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDSSKSNLPFDEILIREYLLDNPDFFSRYPELLLAMRIPHAERGAVSLVERQQEMLRQR CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VNQLEEEITALLAMASRNEQIFMFNSALSMELLKCEDMGELRQVLSNSLKQQFQFSHVRL HHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEE ITVHDIDSELSQIWSKRLDSGYYFGRLTNEESKRLFGSEVGSVALSRLSKECGQVIFAIA EEEECCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SQDPMHFHPEMDYLLLSQLKQLLDHQLTKI CCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIDSSKSNLPFDEILIREYLLDNPDFFSRYPELLLAMRIPHAERGAVSLVERQQEMLRQR CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VNQLEEEITALLAMASRNEQIFMFNSALSMELLKCEDMGELRQVLSNSLKQQFQFSHVRL HHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEE ITVHDIDSELSQIWSKRLDSGYYFGRLTNEESKRLFGSEVGSVALSRLSKECGQVIFAIA EEEECCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SQDPMHFHPEMDYLLLSQLKQLLDHQLTKI CCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA