| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ilvE [H]
Identifier: 157960176
GI number: 157960176
Start: 393352
End: 394281
Strand: Direct
Name: ilvE [H]
Synonym: Spea_0347
Alternate gene names: 157960176
Gene position: 393352-394281 (Clockwise)
Preceding gene: 157960175
Following gene: 157960177
Centisome position: 7.6
GC content: 49.46
Gene sequence:
>930_bases ATGGCCGCTAAAACAGCAGAGTTAATTTGGTTCAATGGTGCAATGATGCCTTGGGGTGATGCTAAGGTTCATGTCATGTC TCACGCGCTGCACTATGGCACGTCAGTATTTGAAGGCATTCGTGTTTACGATACCCACAGCGGTCCTGCCGGGTTTCGCT TAACTGAGCACGTTCAGCGCCTGTTTGATTCGGCCAAGATTTATCGTATGCCAATTCCTTATAGCTTCGATGAGGTGATG CAGGCCTGTCGTGATGCCACTCTCGGTAATAGCTTAAAAAGTGCCTACATCCGCCCCTTAGCTTTTTATGGTGATGTGGG TATGGGGATCACCCCGCCAAAAGATGCTCAGTGTGACTTGCTGGTTGCAGCATTCCCTTGGGGAGCTTATCTAGGGGAAG ACAGCATGGATGCCGGAGTGGATGTGGCAGTGACCTCATGGAATCGCTTAGCGCCGAACACTATCCCTACTGGCGCTAAA GCGGGCGGTAATTACCTGTCTTCACTGCAGATCTCTACCGAAGCTAAGCGTAACGGCTTCGATGAAGGTATCGCGCTGGA CACTAACGGTTTAGTCAGCGAAGCAGCCGGTGCAAATATTTTTGTCATTAAAAAGAACAAGATCTACACACCACCTGCTA CAGCCGCTATTCTGATGGGGCTAACTCGAGACAGCATTATCACCCTTGCACGAGACAAAGGTTATCAAGTAGTTGAAGAG CCAATGTCACGTGAATTTCTCTACCTTGCCGATGAGATCTTTATGACGGGCACCGCTGCTGAGATTGTGCCAGTGCGCAG TGTTGATCGCATCGAAGTCGGCAGTGGCAAGCGCGGTGAGATCACTAAAGAAATTCAACAGAGTTTCTTCGGCCTGTTTA CTGGTGAAACCGAGGATAAATGGGGTTGGTTGGAGACTTTGGAAAGCTAA
Upstream 100 bases:
>100_bases TTGCTAACTAATCAAATCAATAAGCTTATCGATGTGATTGACTGCCGAGTGTTGTTAAGCAGTCCCACAGCAGAATTAGT ACAACAAAAAGGGTGAGAAA
Downstream 100 bases:
>100_bases AGCAGGTGCAAGGTCCTAGGTTCTAGGAAAAGCTAAGAAAGGTCCTAGGAAAGCACAAGCAGAGACGAACGCTTCGCTGA CGGCAAGGCCGGAAAAGATT
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT; Transaminase B [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MAAKTAELIWFNGAMMPWGDAKVHVMSHALHYGTSVFEGIRVYDTHSGPAGFRLTEHVQRLFDSAKIYRMPIPYSFDEVM QACRDATLGNSLKSAYIRPLAFYGDVGMGITPPKDAQCDLLVAAFPWGAYLGEDSMDAGVDVAVTSWNRLAPNTIPTGAK AGGNYLSSLQISTEAKRNGFDEGIALDTNGLVSEAAGANIFVIKKNKIYTPPATAAILMGLTRDSIITLARDKGYQVVEE PMSREFLYLADEIFMTGTAAEIVPVRSVDRIEVGSGKRGEITKEIQQSFFGLFTGETEDKWGWLETLES
Sequences:
>Translated_309_residues MAAKTAELIWFNGAMMPWGDAKVHVMSHALHYGTSVFEGIRVYDTHSGPAGFRLTEHVQRLFDSAKIYRMPIPYSFDEVM QACRDATLGNSLKSAYIRPLAFYGDVGMGITPPKDAQCDLLVAAFPWGAYLGEDSMDAGVDVAVTSWNRLAPNTIPTGAK AGGNYLSSLQISTEAKRNGFDEGIALDTNGLVSEAAGANIFVIKKNKIYTPPATAAILMGLTRDSIITLARDKGYQVVEE PMSREFLYLADEIFMTGTAAEIVPVRSVDRIEVGSGKRGEITKEIQQSFFGLFTGETEDKWGWLETLES >Mature_308_residues AAKTAELIWFNGAMMPWGDAKVHVMSHALHYGTSVFEGIRVYDTHSGPAGFRLTEHVQRLFDSAKIYRMPIPYSFDEVMQ ACRDATLGNSLKSAYIRPLAFYGDVGMGITPPKDAQCDLLVAAFPWGAYLGEDSMDAGVDVAVTSWNRLAPNTIPTGAKA GGNYLSSLQISTEAKRNGFDEGIALDTNGLVSEAAGANIFVIKKNKIYTPPATAAILMGLTRDSIITLARDKGYQVVEEP MSREFLYLADEIFMTGTAAEIVPVRSVDRIEVGSGKRGEITKEIQQSFFGLFTGETEDKWGWLETLES
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI50658084, Length=282, Percent_Identity=26.5957446808511, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI38176287, Length=329, Percent_Identity=24.9240121580547, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI296010906, Length=329, Percent_Identity=24.9240121580547, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI296010904, Length=329, Percent_Identity=24.9240121580547, Blast_Score=72, Evalue=6e-13, Organism=Escherichia coli, GI48994963, Length=307, Percent_Identity=64.4951140065147, Blast_Score=431, Evalue=1e-122, Organism=Escherichia coli, GI1787338, Length=253, Percent_Identity=26.0869565217391, Blast_Score=68, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17568601, Length=285, Percent_Identity=27.719298245614, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17565728, Length=285, Percent_Identity=25.2631578947368, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322002, Length=318, Percent_Identity=26.1006289308176, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322608, Length=336, Percent_Identity=25.297619047619, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24641779, Length=281, Percent_Identity=27.0462633451957, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 33772; Mature: 33641
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKTAELIWFNGAMMPWGDAKVHVMSHALHYGTSVFEGIRVYDTHSGPAGFRLTEHVQR CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHH LFDSAKIYRMPIPYSFDEVMQACRDATLGNSLKSAYIRPLAFYGDVGMGITPPKDAQCDL HHCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHCEEEEECCCCCCCCCCCCCCCCE LVAAFPWGAYLGEDSMDAGVDVAVTSWNRLAPNTIPTGAKAGGNYLSSLQISTEAKRNGF EEEECCCCHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHEEEEECHHHHCCC DEGIALDTNGLVSEAAGANIFVIKKNKIYTPPATAAILMGLTRDSIITLARDKGYQVVEE CCCEEECCCCCHHHCCCCEEEEEECCEEECCCHHHHHHHHCCCCCEEEEECCCCCHHHHH PMSREFLYLADEIFMTGTAAEIVPVRSVDRIEVGSGKRGEITKEIQQSFFGLFTGETEDK HHCCHHHEEEHHHHCCCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHEECCCCCCC WGWLETLES CHHHHHHCC >Mature Secondary Structure AAKTAELIWFNGAMMPWGDAKVHVMSHALHYGTSVFEGIRVYDTHSGPAGFRLTEHVQR CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHH LFDSAKIYRMPIPYSFDEVMQACRDATLGNSLKSAYIRPLAFYGDVGMGITPPKDAQCDL HHCCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHCEEEEECCCCCCCCCCCCCCCCE LVAAFPWGAYLGEDSMDAGVDVAVTSWNRLAPNTIPTGAKAGGNYLSSLQISTEAKRNGF EEEECCCCHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHEEEEECHHHHCCC DEGIALDTNGLVSEAAGANIFVIKKNKIYTPPATAAILMGLTRDSIITLARDKGYQVVEE CCCEEECCCCCHHHCCCCEEEEEECCEEECCCHHHHHHHHCCCCCEEEEECCCCCHHHHH PMSREFLYLADEIFMTGTAAEIVPVRSVDRIEVGSGKRGEITKEIQQSFFGLFTGETEDK HHCCHHHEEEHHHHCCCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHEECCCCCCC WGWLETLES CHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]