| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960121
Identifier: 157960121
GI number: 157960121
Start: 327198
End: 327524
Strand: Reverse
Name: 157960121
Synonym: Spea_0292
Alternate gene names: NA
Gene position: 327524-327198 (Counterclockwise)
Preceding gene: 157960122
Following gene: 157960120
Centisome position: 6.33
GC content: 42.81
Gene sequence:
>327_bases ATGATTAAAGTTGATGAACTTAAAGCACTCTGTGATGATGATGACGCTATGGTCGAGATGCTGCTTACCATTTATATGGA TGAATACGGTCAAAGTGATAGCGTCATTCAACAAAAATACGCGACGGATGACCTTGATGGCTTATTCCAAATATCCCATG AGCTGAAAGGAATGTTTAGTAATTTATGTGCCAAGAATGCCATGAGCCTGGCACAAGTGGTTGAGTCAAGCTCTCAGGCT GGCACCATTCCAGATGAAAGCGCCATTAGCAACCTCTGTGGCGAGATCCAGGTCATCAATGAACAAATCAAAGCGATCTT GCAATAG
Upstream 100 bases:
>100_bases ACTTTCAGCTTGGCTCACCCAAGTCAAAGCGGCATCGACAGAACCTTGTTGAAATATCATCGATAGGCATACCATAGCGA GCCATATAAAGGAGTAAACT
Downstream 100 bases:
>100_bases ATAGCGGTTCAATGAGGCAATGACCAAACCTTACTTGCTTAGGTATTGTCTAACTTGGTTATTTCTTTTTAGCGCGCTTA GTTGCGCCGCCGAAGGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MIKVDELKALCDDDDAMVEMLLTIYMDEYGQSDSVIQQKYATDDLDGLFQISHELKGMFSNLCAKNAMSLAQVVESSSQA GTIPDESAISNLCGEIQVINEQIKAILQ
Sequences:
>Translated_108_residues MIKVDELKALCDDDDAMVEMLLTIYMDEYGQSDSVIQQKYATDDLDGLFQISHELKGMFSNLCAKNAMSLAQVVESSSQA GTIPDESAISNLCGEIQVINEQIKAILQ >Mature_108_residues MIKVDELKALCDDDDAMVEMLLTIYMDEYGQSDSVIQQKYATDDLDGLFQISHELKGMFSNLCAKNAMSLAQVVESSSQA GTIPDESAISNLCGEIQVINEQIKAILQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11881; Mature: 11881
Theoretical pI: Translated: 3.79; Mature: 3.79
Prosite motif: PS50894 HPT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKVDELKALCDDDDAMVEMLLTIYMDEYGQSDSVIQQKYATDDLDGLFQISHELKGMFS CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH NLCAKNAMSLAQVVESSSQAGTIPDESAISNLCGEIQVINEQIKAILQ HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKVDELKALCDDDDAMVEMLLTIYMDEYGQSDSVIQQKYATDDLDGLFQISHELKGMFS CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH NLCAKNAMSLAQVVESSSQAGTIPDESAISNLCGEIQVINEQIKAILQ HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA