| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960117
Identifier: 157960117
GI number: 157960117
Start: 323371
End: 324408
Strand: Direct
Name: 157960117
Synonym: Spea_0288
Alternate gene names: NA
Gene position: 323371-324408 (Clockwise)
Preceding gene: 157960116
Following gene: 157960118
Centisome position: 6.25
GC content: 43.26
Gene sequence:
>1038_bases ATGTTATTTCGTCGAGTTTTTTTTATCACACTATCATCCCTGCTATGTACGCCTGCAATGGCGAGTATTGAATTGACGGA AAATATACGGTTAGGTGGATTCGGTTCAACCTCCATTAGTCAGAGTGACAACCGCACTCCGTTATTCATAAGTCGAGAAA TTACCGATGAGACTTGTTATGACTGTGACACCACCTTTGGTTTACAGTTAGATGTGGGCATCGCCGAGGGATTTGGGGCA TCAGGACAAGTGGTAAAGCGAACTCAGGATAGCTGGAGTGATCCAGAGCTTGAGTGGGCTTATTTATTCTACGAGTTTGA TGACTTTGAAGTGAGGGCTGGTCGTCTACGCTTACCGTTATTTTTAGCTTCTGAATATTACTATGTTGGCCAAGCTTACC CGTGGATAAGGCCGCCTCAAGAAGTTTATGACAGCATTCTAGGCTTCACTTTTTATGATGGACTGTCTCTTTCTTGGGAT TATGAAATTTCTGATGAACTACAGCTTACGGTTTCCCCATATTATGGATTTGACCGCCTAAATAAGGTCGAGTTAGGCGA GTTTTTATTACAGTTTGATACCGAATATATGGCGGGGATCTACGTCGATTTGACCGGGTTTAATTACCGCATCCATAGCG GTTTTATGCAGGCTAAATATGCTCAGCGTCCTTTTAATACCACACAAAAATTAGATATTTATACCTTAGGTGCCGAGTAC AGTTATGAGTCGTGGCAGTTTATGGCAGAAACTGAGATTGACCGGCTACAGGCCAATTGGTATGCCTCTGTGATTTACGC CTTTGACGACTTATCTCCTTATATTACCTATGCGGAAAGCCATCAGCTGCGTAAATCAAAAGGGGTGACGGCTGGGGTTA GGTATGACGTGACTTCCAGTATTTCGTTAAATGCAGAGTATCAGATGATTTTCTCCCAAGAGGAGGGCAATAGGGCGCAG TTTGTCACCTCTCCTTTAGTGTATGGCGAAAGTGCAGATGTAGACCTGATGACTCTAAGCGTCAGTTTTGTCTTTTAA
Upstream 100 bases:
>100_bases AATGGCTAAATGAAAATCCCAATGGTATTGCGTATGCACCAATTGAAGCGGTACCGGAAGAAGTGAACATATTAATAACC GTGCCACAGGGAGAGTAGCC
Downstream 100 bases:
>100_bases TGATGGATAACATTCTATTTTGGCTTGGTTTTTATATAGCGATGTTGATTGCTTCAATTGCAATAGGCTATAGCAAAGGC AATATCGTTGCCGGAGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MLFRRVFFITLSSLLCTPAMASIELTENIRLGGFGSTSISQSDNRTPLFISREITDETCYDCDTTFGLQLDVGIAEGFGA SGQVVKRTQDSWSDPELEWAYLFYEFDDFEVRAGRLRLPLFLASEYYYVGQAYPWIRPPQEVYDSILGFTFYDGLSLSWD YEISDELQLTVSPYYGFDRLNKVELGEFLLQFDTEYMAGIYVDLTGFNYRIHSGFMQAKYAQRPFNTTQKLDIYTLGAEY SYESWQFMAETEIDRLQANWYASVIYAFDDLSPYITYAESHQLRKSKGVTAGVRYDVTSSISLNAEYQMIFSQEEGNRAQ FVTSPLVYGESADVDLMTLSVSFVF
Sequences:
>Translated_345_residues MLFRRVFFITLSSLLCTPAMASIELTENIRLGGFGSTSISQSDNRTPLFISREITDETCYDCDTTFGLQLDVGIAEGFGA SGQVVKRTQDSWSDPELEWAYLFYEFDDFEVRAGRLRLPLFLASEYYYVGQAYPWIRPPQEVYDSILGFTFYDGLSLSWD YEISDELQLTVSPYYGFDRLNKVELGEFLLQFDTEYMAGIYVDLTGFNYRIHSGFMQAKYAQRPFNTTQKLDIYTLGAEY SYESWQFMAETEIDRLQANWYASVIYAFDDLSPYITYAESHQLRKSKGVTAGVRYDVTSSISLNAEYQMIFSQEEGNRAQ FVTSPLVYGESADVDLMTLSVSFVF >Mature_345_residues MLFRRVFFITLSSLLCTPAMASIELTENIRLGGFGSTSISQSDNRTPLFISREITDETCYDCDTTFGLQLDVGIAEGFGA SGQVVKRTQDSWSDPELEWAYLFYEFDDFEVRAGRLRLPLFLASEYYYVGQAYPWIRPPQEVYDSILGFTFYDGLSLSWD YEISDELQLTVSPYYGFDRLNKVELGEFLLQFDTEYMAGIYVDLTGFNYRIHSGFMQAKYAQRPFNTTQKLDIYTLGAEY SYESWQFMAETEIDRLQANWYASVIYAFDDLSPYITYAESHQLRKSKGVTAGVRYDVTSSISLNAEYQMIFSQEEGNRAQ FVTSPLVYGESADVDLMTLSVSFVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39646; Mature: 39646
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFRRVFFITLSSLLCTPAMASIELTENIRLGGFGSTSISQSDNRTPLFISREITDETCY CCHHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCC DCDTTFGLQLDVGIAEGFGASGQVVKRTQDSWSDPELEWAYLFYEFDDFEVRAGRLRLPL CCCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCEEECCEEEEEE FLASEYYYVGQAYPWIRPPQEVYDSILGFTFYDGLSLSWDYEISDELQLTVSPYYGFDRL EEECCEEEECCCCCCCCCHHHHHHHHHCEEEECCCEEEEEEEECCCEEEEECCCCCCCCC NKVELGEFLLQFDTEYMAGIYVDLTGFNYRIHSGFMQAKYAQRPFNTTQKLDIYTLGAEY CHHHHHHHHHHHCCCCEEEEEEEEECCEEEEECCHHHHHHHCCCCCCCCEEEEEEECCCC SYESWQFMAETEIDRLQANWYASVIYAFDDLSPYITYAESHQLRKSKGVTAGVRYDVTSS CCCCEEEEEHHHHHHHHHCEEEEEEEEECCCCCEEEECCHHHHHHHCCCEEEEEEEEECE ISLNAEYQMIFSQEEGNRAQFVTSPLVYGESADVDLMTLSVSFVF EEECCEEEEEEECCCCCEEEEEECCEEECCCCCEEEEEEEEEEEC >Mature Secondary Structure MLFRRVFFITLSSLLCTPAMASIELTENIRLGGFGSTSISQSDNRTPLFISREITDETCY CCHHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCC DCDTTFGLQLDVGIAEGFGASGQVVKRTQDSWSDPELEWAYLFYEFDDFEVRAGRLRLPL CCCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCEEECCEEEEEE FLASEYYYVGQAYPWIRPPQEVYDSILGFTFYDGLSLSWDYEISDELQLTVSPYYGFDRL EEECCEEEECCCCCCCCCHHHHHHHHHCEEEECCCEEEEEEEECCCEEEEECCCCCCCCC NKVELGEFLLQFDTEYMAGIYVDLTGFNYRIHSGFMQAKYAQRPFNTTQKLDIYTLGAEY CHHHHHHHHHHHCCCCEEEEEEEEECCEEEEECCHHHHHHHCCCCCCCCEEEEEEECCCC SYESWQFMAETEIDRLQANWYASVIYAFDDLSPYITYAESHQLRKSKGVTAGVRYDVTSS CCCCEEEEEHHHHHHHHHCEEEEEEEEECCCCCEEEECCHHHHHHHCCCEEEEEEEEECE ISLNAEYQMIFSQEEGNRAQFVTSPLVYGESADVDLMTLSVSFVF EEECCEEEEEEECCCCCEEEEEECCEEECCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA