Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157960117

Identifier: 157960117

GI number: 157960117

Start: 323371

End: 324408

Strand: Direct

Name: 157960117

Synonym: Spea_0288

Alternate gene names: NA

Gene position: 323371-324408 (Clockwise)

Preceding gene: 157960116

Following gene: 157960118

Centisome position: 6.25

GC content: 43.26

Gene sequence:

>1038_bases
ATGTTATTTCGTCGAGTTTTTTTTATCACACTATCATCCCTGCTATGTACGCCTGCAATGGCGAGTATTGAATTGACGGA
AAATATACGGTTAGGTGGATTCGGTTCAACCTCCATTAGTCAGAGTGACAACCGCACTCCGTTATTCATAAGTCGAGAAA
TTACCGATGAGACTTGTTATGACTGTGACACCACCTTTGGTTTACAGTTAGATGTGGGCATCGCCGAGGGATTTGGGGCA
TCAGGACAAGTGGTAAAGCGAACTCAGGATAGCTGGAGTGATCCAGAGCTTGAGTGGGCTTATTTATTCTACGAGTTTGA
TGACTTTGAAGTGAGGGCTGGTCGTCTACGCTTACCGTTATTTTTAGCTTCTGAATATTACTATGTTGGCCAAGCTTACC
CGTGGATAAGGCCGCCTCAAGAAGTTTATGACAGCATTCTAGGCTTCACTTTTTATGATGGACTGTCTCTTTCTTGGGAT
TATGAAATTTCTGATGAACTACAGCTTACGGTTTCCCCATATTATGGATTTGACCGCCTAAATAAGGTCGAGTTAGGCGA
GTTTTTATTACAGTTTGATACCGAATATATGGCGGGGATCTACGTCGATTTGACCGGGTTTAATTACCGCATCCATAGCG
GTTTTATGCAGGCTAAATATGCTCAGCGTCCTTTTAATACCACACAAAAATTAGATATTTATACCTTAGGTGCCGAGTAC
AGTTATGAGTCGTGGCAGTTTATGGCAGAAACTGAGATTGACCGGCTACAGGCCAATTGGTATGCCTCTGTGATTTACGC
CTTTGACGACTTATCTCCTTATATTACCTATGCGGAAAGCCATCAGCTGCGTAAATCAAAAGGGGTGACGGCTGGGGTTA
GGTATGACGTGACTTCCAGTATTTCGTTAAATGCAGAGTATCAGATGATTTTCTCCCAAGAGGAGGGCAATAGGGCGCAG
TTTGTCACCTCTCCTTTAGTGTATGGCGAAAGTGCAGATGTAGACCTGATGACTCTAAGCGTCAGTTTTGTCTTTTAA

Upstream 100 bases:

>100_bases
AATGGCTAAATGAAAATCCCAATGGTATTGCGTATGCACCAATTGAAGCGGTACCGGAAGAAGTGAACATATTAATAACC
GTGCCACAGGGAGAGTAGCC

Downstream 100 bases:

>100_bases
TGATGGATAACATTCTATTTTGGCTTGGTTTTTATATAGCGATGTTGATTGCTTCAATTGCAATAGGCTATAGCAAAGGC
AATATCGTTGCCGGAGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MLFRRVFFITLSSLLCTPAMASIELTENIRLGGFGSTSISQSDNRTPLFISREITDETCYDCDTTFGLQLDVGIAEGFGA
SGQVVKRTQDSWSDPELEWAYLFYEFDDFEVRAGRLRLPLFLASEYYYVGQAYPWIRPPQEVYDSILGFTFYDGLSLSWD
YEISDELQLTVSPYYGFDRLNKVELGEFLLQFDTEYMAGIYVDLTGFNYRIHSGFMQAKYAQRPFNTTQKLDIYTLGAEY
SYESWQFMAETEIDRLQANWYASVIYAFDDLSPYITYAESHQLRKSKGVTAGVRYDVTSSISLNAEYQMIFSQEEGNRAQ
FVTSPLVYGESADVDLMTLSVSFVF

Sequences:

>Translated_345_residues
MLFRRVFFITLSSLLCTPAMASIELTENIRLGGFGSTSISQSDNRTPLFISREITDETCYDCDTTFGLQLDVGIAEGFGA
SGQVVKRTQDSWSDPELEWAYLFYEFDDFEVRAGRLRLPLFLASEYYYVGQAYPWIRPPQEVYDSILGFTFYDGLSLSWD
YEISDELQLTVSPYYGFDRLNKVELGEFLLQFDTEYMAGIYVDLTGFNYRIHSGFMQAKYAQRPFNTTQKLDIYTLGAEY
SYESWQFMAETEIDRLQANWYASVIYAFDDLSPYITYAESHQLRKSKGVTAGVRYDVTSSISLNAEYQMIFSQEEGNRAQ
FVTSPLVYGESADVDLMTLSVSFVF
>Mature_345_residues
MLFRRVFFITLSSLLCTPAMASIELTENIRLGGFGSTSISQSDNRTPLFISREITDETCYDCDTTFGLQLDVGIAEGFGA
SGQVVKRTQDSWSDPELEWAYLFYEFDDFEVRAGRLRLPLFLASEYYYVGQAYPWIRPPQEVYDSILGFTFYDGLSLSWD
YEISDELQLTVSPYYGFDRLNKVELGEFLLQFDTEYMAGIYVDLTGFNYRIHSGFMQAKYAQRPFNTTQKLDIYTLGAEY
SYESWQFMAETEIDRLQANWYASVIYAFDDLSPYITYAESHQLRKSKGVTAGVRYDVTSSISLNAEYQMIFSQEEGNRAQ
FVTSPLVYGESADVDLMTLSVSFVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39646; Mature: 39646

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFRRVFFITLSSLLCTPAMASIELTENIRLGGFGSTSISQSDNRTPLFISREITDETCY
CCHHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCC
DCDTTFGLQLDVGIAEGFGASGQVVKRTQDSWSDPELEWAYLFYEFDDFEVRAGRLRLPL
CCCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCEEECCEEEEEE
FLASEYYYVGQAYPWIRPPQEVYDSILGFTFYDGLSLSWDYEISDELQLTVSPYYGFDRL
EEECCEEEECCCCCCCCCHHHHHHHHHCEEEECCCEEEEEEEECCCEEEEECCCCCCCCC
NKVELGEFLLQFDTEYMAGIYVDLTGFNYRIHSGFMQAKYAQRPFNTTQKLDIYTLGAEY
CHHHHHHHHHHHCCCCEEEEEEEEECCEEEEECCHHHHHHHCCCCCCCCEEEEEEECCCC
SYESWQFMAETEIDRLQANWYASVIYAFDDLSPYITYAESHQLRKSKGVTAGVRYDVTSS
CCCCEEEEEHHHHHHHHHCEEEEEEEEECCCCCEEEECCHHHHHHHCCCEEEEEEEEECE
ISLNAEYQMIFSQEEGNRAQFVTSPLVYGESADVDLMTLSVSFVF
EEECCEEEEEEECCCCCEEEEEECCEEECCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MLFRRVFFITLSSLLCTPAMASIELTENIRLGGFGSTSISQSDNRTPLFISREITDETCY
CCHHHHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCC
DCDTTFGLQLDVGIAEGFGASGQVVKRTQDSWSDPELEWAYLFYEFDDFEVRAGRLRLPL
CCCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCEEECCEEEEEE
FLASEYYYVGQAYPWIRPPQEVYDSILGFTFYDGLSLSWDYEISDELQLTVSPYYGFDRL
EEECCEEEECCCCCCCCCHHHHHHHHHCEEEECCCEEEEEEEECCCEEEEECCCCCCCCC
NKVELGEFLLQFDTEYMAGIYVDLTGFNYRIHSGFMQAKYAQRPFNTTQKLDIYTLGAEY
CHHHHHHHHHHHCCCCEEEEEEEEECCEEEEECCHHHHHHHCCCCCCCCEEEEEEECCCC
SYESWQFMAETEIDRLQANWYASVIYAFDDLSPYITYAESHQLRKSKGVTAGVRYDVTSS
CCCCEEEEEHHHHHHHHHCEEEEEEEEECCCCCEEEECCHHHHHHHCCCEEEEEEEEECE
ISLNAEYQMIFSQEEGNRAQFVTSPLVYGESADVDLMTLSVSFVF
EEECCEEEEEEECCCCCEEEEEECCEEECCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA