| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157960104
Identifier: 157960104
GI number: 157960104
Start: 306836
End: 307255
Strand: Direct
Name: 157960104
Synonym: Spea_0275
Alternate gene names: NA
Gene position: 306836-307255 (Clockwise)
Preceding gene: 157960100
Following gene: 157960107
Centisome position: 5.93
GC content: 42.62
Gene sequence:
>420_bases ATGCGTACATTACCAATACTGTTGTTGATATTGAGCATTGCATTGAGCGGTTGCGCCTCGAGCGAAGCGAGTAAAGAGCG GGCCGCAATGTATACTTTTACTGAACTTGAACAGGTAAATTCAATCGGTAATTTTCGTATGGATGGTTGGGAAAGTGTCG ATAAATACTCAGTTATCGTTAATTCCCGACCTAGGCAGAGCTATTTGTTGATCTTGAGTGGTGGCTTAAATGATCTTAAA TTTGCCCAAGGCTTATTGGTAACATCCACTCTCGGCAAGGTCGAGGTGGGTTTTGATACTGTCTCTACCGTGCAAGACCC TATGATGAAGGCGCAAATAAAGCGGATCTATAAGCTGGAGAATAAACAGCAGAAGAATGATATTAAGGCCAAAATTGAAG CCTTCGCTGATAGCAAGTAG
Upstream 100 bases:
>100_bases ATTAACGGCATTGCACCTTGTGCAGTAACTTTAAATAGCCGTTTGTTGCTTATTAACCGCGTGCGGCTACAGTTAATTTT ACTGAAGCAGGAGATATCTT
Downstream 100 bases:
>100_bases CGTTGGCTCGTGGGTCTGGCTAATAACTTTTAGTCGTGGTTCAGAGTAATCATATCGGCCAGCATTTAAGCCTCTCATTT ATTAGAGGCTTTTTTATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MRTLPILLLILSIALSGCASSEASKERAAMYTFTELEQVNSIGNFRMDGWESVDKYSVIVNSRPRQSYLLILSGGLNDLK FAQGLLVTSTLGKVEVGFDTVSTVQDPMMKAQIKRIYKLENKQQKNDIKAKIEAFADSK
Sequences:
>Translated_139_residues MRTLPILLLILSIALSGCASSEASKERAAMYTFTELEQVNSIGNFRMDGWESVDKYSVIVNSRPRQSYLLILSGGLNDLK FAQGLLVTSTLGKVEVGFDTVSTVQDPMMKAQIKRIYKLENKQQKNDIKAKIEAFADSK >Mature_139_residues MRTLPILLLILSIALSGCASSEASKERAAMYTFTELEQVNSIGNFRMDGWESVDKYSVIVNSRPRQSYLLILSGGLNDLK FAQGLLVTSTLGKVEVGFDTVSTVQDPMMKAQIKRIYKLENKQQKNDIKAKIEAFADSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15467; Mature: 15467
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLPILLLILSIALSGCASSEASKERAAMYTFTELEQVNSIGNFRMDGWESVDKYSVIV CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE NSRPRQSYLLILSGGLNDLKFAQGLLVTSTLGKVEVGFDTVSTVQDPMMKAQIKRIYKLE CCCCCCEEEEEEECCCCHHHHHCCHHEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH NKQQKNDIKAKIEAFADSK CHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRTLPILLLILSIALSGCASSEASKERAAMYTFTELEQVNSIGNFRMDGWESVDKYSVIV CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE NSRPRQSYLLILSGGLNDLKFAQGLLVTSTLGKVEVGFDTVSTVQDPMMKAQIKRIYKLE CCCCCCEEEEEEECCCCHHHHHCCHHEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH NKQQKNDIKAKIEAFADSK CHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA